RNA–Protein interactions for RNA: ENST00000556092.5

SEC23A-212, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4

Gene SEC23A, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-212ENST00000556092 ATG3Q9NT62 314 aa19.22■□□□□ 0.67
SEC23A-212ENST00000556092 KDRP35968 1356 aa19.21■□□□□ 0.67
SEC23A-212ENST00000556092 HSP90AB1P08238 724 aaKnown RBP19.21■□□□□ 0.67
SEC23A-212ENST00000556092 ATP6V1AP38606 617 aa19.21■□□□□ 0.67
SEC23A-212ENST00000556092 ITPK1Q13572 414 aa19.21■□□□□ 0.67
SEC23A-212ENST00000556092 AMOTQ4VCS5 1084 aa19.21■□□□□ 0.67
SEC23A-212ENST00000556092 SULT6B1Q6IMI4 303 aa19.21■□□□□ 0.67
SEC23A-212ENST00000556092 SMIM5Q71RC9 77 aa19.21■□□□□ 0.67
SEC23A-212ENST00000556092 DCAF5Q96JK2 942 aa19.21■□□□□ 0.67
SEC23A-212ENST00000556092 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.2■□□□□ 0.66
SEC23A-212ENST00000556092 ERVV-2B6SEH9 535 aa19.19■□□□□ 0.66
SEC23A-212ENST00000556092 SSFA2P28290 1259 aa19.19■□□□□ 0.66
SEC23A-212ENST00000556092 IL13P35225 146 aa19.19■□□□□ 0.66
SEC23A-212ENST00000556092 C1orf141Q5JVX7 400 aa19.19■□□□□ 0.66
SEC23A-212ENST00000556092 MYH14Q7Z406 1995 aaKnown RBP19.19■□□□□ 0.66
SEC23A-212ENST00000556092 UTRNP46939 3433 aa19.18■□□□□ 0.66
SEC23A-212ENST00000556092 GNPATO15228 680 aa19.18■□□□□ 0.66
SEC23A-212ENST00000556092 C4AP0C0L4 1744 aa19.17■□□□□ 0.66
SEC23A-212ENST00000556092 CABP4P57796 275 aa19.17■□□□□ 0.66
SEC23A-212ENST00000556092 CC2D1BQ5T0F9 858 aaKnown RBP19.17■□□□□ 0.66
SEC23A-212ENST00000556092 RBM42Q9BTD8 480 aaKnown RBP19.17■□□□□ 0.66
SEC23A-212ENST00000556092 MTHFSP49914 203 aa19.16■□□□□ 0.66
SEC23A-212ENST00000556092 TJP1Q07157 1748 aa19.16■□□□□ 0.66
SEC23A-212ENST00000556092 PER1O15534 1290 aaPredicted RBP19.15■□□□□ 0.66
SEC23A-212ENST00000556092 ZNF784Q8NCA9 323 aaPredicted RBP19.15■□□□□ 0.66
SEC23A-212ENST00000556092 SLC4A9Q96Q91 983 aa19.14■□□□□ 0.65
SEC23A-212ENST00000556092 CICQ96RK0 1608 aaPredicted RBP19.14■□□□□ 0.65
SEC23A-212ENST00000556092 YBX3P16989 372 aaKnown RBP eCLIP19.13■□□□□ 0.657e-8■□□□□ 8.2
SEC23A-212ENST00000556092 CNGB1Q14028 1251 aaPredicted RBP19.13■□□□□ 0.65
SEC23A-212ENST00000556092 HMOX1P09601 288 aa19.12■□□□□ 0.65
SEC23A-212ENST00000556092 CD2APQ9Y5K6 639 aa19.12■□□□□ 0.65
SEC23A-212ENST00000556092 KIF13BQ9NQT8 1826 aa19.11■□□□□ 0.65
SEC23A-212ENST00000556092 RTCBQ9Y3I0 505 aaKnown RBP19.11■□□□□ 0.65
SEC23A-212ENST00000556092 COL3A1P02461 1466 aaPredicted RBP19.1■□□□□ 0.65
SEC23A-212ENST00000556092 MRC1P22897 1456 aa19.1■□□□□ 0.65
SEC23A-212ENST00000556092 NPC1L1Q9UHC9 1359 aa19.1■□□□□ 0.65
SEC23A-212ENST00000556092 CNTNAP4Q9C0A0 1308 aa19.1■□□□□ 0.65
SEC23A-212ENST00000556092 NFATC2IPQ8NCF5 419 aa19.1■□□□□ 0.65
SEC23A-212ENST00000556092 ADAMTS7Q9UKP4 1686 aa19.1■□□□□ 0.65
SEC23A-212ENST00000556092 GOLGB1Q14789 3259 aaKnown RBP19.09■□□□□ 0.65
SEC23A-212ENST00000556092 DIAPH1O60610 1272 aaKnown RBP19.09■□□□□ 0.65
SEC23A-212ENST00000556092 PTCD1O75127 700 aaKnown RBP19.09■□□□□ 0.65
SEC23A-212ENST00000556092 AKAP4Q5JQC9 854 aa19.09■□□□□ 0.65
SEC23A-212ENST00000556092 N4BP2Q86UW6 1770 aaPredicted RBP19.09■□□□□ 0.65
SEC23A-212ENST00000556092 GRIN3BO60391 1043 aa19.08■□□□□ 0.64
SEC23A-212ENST00000556092 TRAPPC3LQ5T215 181 aa19.08■□□□□ 0.64
SEC23A-212ENST00000556092 KIAA1551Q9HCM1 1747 aa19.08■□□□□ 0.64
SEC23A-212ENST00000556092 RC3H1Q5TC82 1133 aaKnown RBP19.07■□□□□ 0.64
SEC23A-212ENST00000556092 MMP10P09238 476 aa19.06■□□□□ 0.64
SEC23A-212ENST00000556092 WWC3Q9ULE0 1092 aa19.06■□□□□ 0.64
SEC23A-212ENST00000556092 UBR2Q8IWV8 1755 aa19.06■□□□□ 0.64
SEC23A-212ENST00000556092 RPS6KA4O75676 772 aa19.05■□□□□ 0.64
SEC23A-212ENST00000556092 ADRA2BP18089 450 aa19.05■□□□□ 0.64
SEC23A-212ENST00000556092 ARHGEF1Q92888 912 aaKnown RBP19.05■□□□□ 0.64
SEC23A-212ENST00000556092 SLC52A2Q9HAB3 445 aa19.05■□□□□ 0.64
SEC23A-212ENST00000556092 RNMTO43148 476 aaKnown RBP19.04■□□□□ 0.64
SEC23A-212ENST00000556092 CRKLP46109 303 aaKnown RBP19.04■□□□□ 0.64
SEC23A-212ENST00000556092 MTHFSDQ2M296 383 aaKnown RBP19.04■□□□□ 0.64
SEC23A-212ENST00000556092 LGR6Q9HBX8 967 aa19.04■□□□□ 0.64
SEC23A-212ENST00000556092 BRCA1P38398 1863 aaKnown RBP19.03■□□□□ 0.64
SEC23A-212ENST00000556092 U2SURPO15042 1029 aaKnown RBP19.03■□□□□ 0.64
SEC23A-212ENST00000556092 RFC4P35249 363 aa19.03■□□□□ 0.64
SEC23A-212ENST00000556092 KCPQ6ZWJ8 1503 aa19.03■□□□□ 0.64
SEC23A-212ENST00000556092 SIPA1L3O60292 1781 aaPredicted RBP19.03■□□□□ 0.64
SEC23A-212ENST00000556092 NLGN1Q8N2Q7 840 aa19.02■□□□□ 0.64
SEC23A-212ENST00000556092 C10orf71Q711Q0 1435 aa19.01■□□□□ 0.63
SEC23A-212ENST00000556092 GYS1P13807 737 aa19.01■□□□□ 0.63
SEC23A-212ENST00000556092 PXDNLA1KZ92 1463 aa19.01■□□□□ 0.63
SEC23A-212ENST00000556092 SLC39A6Q13433 755 aa19■□□□□ 0.63
SEC23A-212ENST00000556092 DNAJC10Q8IXB1 793 aa19■□□□□ 0.63
SEC23A-212ENST00000556092 SRP68Q9UHB9 627 aaKnown RBP18.98■□□□□ 0.63
SEC23A-212ENST00000556092 USP42Q9H9J4 1324 aaKnown RBP18.98■□□□□ 0.63
SEC23A-212ENST00000556092 INTS5Q6P9B9 1019 aaKnown RBP18.97■□□□□ 0.63
SEC23A-212ENST00000556092 CCDC87Q9NVE4 849 aa18.97■□□□□ 0.63
SEC23A-212ENST00000556092 PARP3Q9Y6F1 533 aa18.97■□□□□ 0.63
SEC23A-212ENST00000556092 ATP10DQ9P241 1426 aa18.97■□□□□ 0.63
SEC23A-212ENST00000556092 AFDNP55196 1824 aaKnown RBP18.97■□□□□ 0.63
SEC23A-212ENST00000556092 ARFGEF1Q9Y6D6 1849 aa18.97■□□□□ 0.63
SEC23A-212ENST00000556092 GAS2L2Q8NHY3 880 aa18.96■□□□□ 0.63
SEC23A-212ENST00000556092 CFAP53Q96M91 514 aa18.96■□□□□ 0.63
SEC23A-212ENST00000556092 GIGYF1O75420 1035 aaPredicted RBP18.95■□□□□ 0.62
SEC23A-212ENST00000556092 SOS1Q07889 1333 aaPredicted RBP18.95■□□□□ 0.62
SEC23A-212ENST00000556092 ADCY9O60503 1353 aa18.94■□□□□ 0.62
SEC23A-212ENST00000556092 CYP19A1P11511 503 aaPredicted RBP18.94■□□□□ 0.62
SEC23A-212ENST00000556092 TGFB2P61812 414 aa18.94■□□□□ 0.62
SEC23A-212ENST00000556092 FKBP8Q14318 412 aa18.94■□□□□ 0.62
SEC23A-212ENST00000556092 COL15A1P39059 1388 aa18.93■□□□□ 0.62
SEC23A-212ENST00000556092 A0A0G2JLW4 131 aa18.93■□□□□ 0.62
SEC23A-212ENST00000556092 GNAT3A8MTJ3 354 aa18.93■□□□□ 0.62
SEC23A-212ENST00000556092 C1QTNF8P60827 252 aa18.93■□□□□ 0.62
SEC23A-212ENST00000556092 PRKAR2BP31323 418 aa18.92■□□□□ 0.62
SEC23A-212ENST00000556092 DDR1Q08345 913 aa18.92■□□□□ 0.62
SEC23A-212ENST00000556092 TEFQ10587 303 aa18.92■□□□□ 0.62
SEC23A-212ENST00000556092 TTC5Q8N0Z6 440 aa18.92■□□□□ 0.62
SEC23A-212ENST00000556092 BCS1LQ9Y276 419 aa18.92■□□□□ 0.62
SEC23A-212ENST00000556092 ZBTB1Q9Y2K1 713 aa18.92■□□□□ 0.62
SEC23A-212ENST00000556092 ZPR1O75312 459 aa18.91■□□□□ 0.62
SEC23A-212ENST00000556092 DPEP1P16444 411 aa18.91■□□□□ 0.62
SEC23A-212ENST00000556092 PPP2R1AP30153 589 aa18.91■□□□□ 0.62
SEC23A-212ENST00000556092 USPL1Q5W0Q7 1092 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms