RNA–Protein interactions for RNA: ENST00000556071.5

LINC00871-202, long intergenic non-protein coding RNA 871, humanhuman

TSL 3 BASIC

Gene LINC00871, Length 554 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-202ENST00000556071 TRIM47Q96LD4 638 aa11.41□□□□□ -0.58
LINC00871-202ENST00000556071 NLRP3Q96P20 1036 aa11.41□□□□□ -0.58
LINC00871-202ENST00000556071 SENP2Q9HC62 589 aa11.41□□□□□ -0.58
LINC00871-202ENST00000556071 TTLL8A6PVC2 850 aa11.4□□□□□ -0.58
LINC00871-202ENST00000556071 WASLO00401 505 aaPredicted RBP11.4□□□□□ -0.58
LINC00871-202ENST00000556071 FOXD4L5Q5VV16 416 aaPredicted RBP11.4□□□□□ -0.58
LINC00871-202ENST00000556071 HRH3Q9Y5N1 445 aa11.4□□□□□ -0.58
LINC00871-202ENST00000556071 ZNF358Q9NW07 568 aa11.39□□□□□ -0.59
LINC00871-202ENST00000556071 SERTAD1Q9UHV2 236 aa11.39□□□□□ -0.59
LINC00871-202ENST00000556071 DPYDQ12882 1025 aa11.38□□□□□ -0.59
LINC00871-202ENST00000556071 ANKMY2Q8IV38 441 aa11.38□□□□□ -0.59
LINC00871-202ENST00000556071 RNF217Q8TC41 542 aa11.38□□□□□ -0.59
LINC00871-202ENST00000556071 KIFC2Q96AC6 838 aa11.38□□□□□ -0.59
LINC00871-202ENST00000556071 DNMT3LQ9UJW3 386 aa11.38□□□□□ -0.59
LINC00871-202ENST00000556071 FIGNL2A6NMB9 653 aa11.37□□□□□ -0.59
LINC00871-202ENST00000556071 SOBPA7XYQ1 873 aa11.37□□□□□ -0.59
LINC00871-202ENST00000556071 SFI1A8K8P3 1242 aa11.37□□□□□ -0.59
LINC00871-202ENST00000556071 C11orf95C9JLR9 678 aaPredicted RBP11.37□□□□□ -0.59
LINC00871-202ENST00000556071 ATG7O95352 703 aa11.37□□□□□ -0.59
LINC00871-202ENST00000556071 SNRPBP14678 240 aaKnown RBP11.37□□□□□ -0.59
LINC00871-202ENST00000556071 RNF144AP50876 292 aaPredicted RBP11.37□□□□□ -0.59
LINC00871-202ENST00000556071 CENPCQ03188 943 aa11.37□□□□□ -0.59
LINC00871-202ENST00000556071 ARXQ96QS3 562 aa11.37□□□□□ -0.59
LINC00871-202ENST00000556071 PPP1R15AO75807 674 aaPredicted RBP11.36□□□□□ -0.59
LINC00871-202ENST00000556071 GPC1P35052 558 aa11.36□□□□□ -0.59
LINC00871-202ENST00000556071 TLR1Q15399 786 aa11.36□□□□□ -0.59
LINC00871-202ENST00000556071 FHDC1Q9C0D6 1143 aaPredicted RBP11.36□□□□□ -0.59
LINC00871-202ENST00000556071 ZMIZ1Q9ULJ6 1067 aa11.36□□□□□ -0.59
LINC00871-202ENST00000556071 NOVA2Q9UNW9 492 aaKnown RBP11.36□□□□□ -0.59
LINC00871-202ENST00000556071 RBM19Q9Y4C8 960 aaKnown RBP11.36□□□□□ -0.59
LINC00871-202ENST00000556071 MAN1A2O60476 641 aa11.35□□□□□ -0.59
LINC00871-202ENST00000556071 SLC27A3Q5K4L6 730 aa11.35□□□□□ -0.59
LINC00871-202ENST00000556071 SLC4A9Q96Q91 983 aa11.35□□□□□ -0.59
LINC00871-202ENST00000556071 BACH1O14867 736 aa11.34□□□□□ -0.59
LINC00871-202ENST00000556071 SEC13P55735 322 aa11.34□□□□□ -0.59
LINC00871-202ENST00000556071 GRIP2Q9C0E4 1043 aa11.34□□□□□ -0.59
LINC00871-202ENST00000556071 SMTNP53814 917 aa11.33□□□□□ -0.6
LINC00871-202ENST00000556071 ELOAQ14241 798 aaKnown RBP11.33□□□□□ -0.6
LINC00871-202ENST00000556071 PRICKLE2Q7Z3G6 844 aa11.33□□□□□ -0.6
LINC00871-202ENST00000556071 TSEN2Q8NCE0 465 aaKnown RBP11.33□□□□□ -0.6
LINC00871-202ENST00000556071 STK32AQ8WU08 396 aa11.33□□□□□ -0.6
LINC00871-202ENST00000556071 ZNF775Q96BV0 537 aaPredicted RBP11.33□□□□□ -0.6
LINC00871-202ENST00000556071 TNS4Q8IZW8 715 aa11.32□□□□□ -0.6
LINC00871-202ENST00000556071 FAM200AQ8TCP9 573 aa11.32□□□□□ -0.6
LINC00871-202ENST00000556071 ZSCAN10Q96SZ4 725 aaPredicted RBP11.32□□□□□ -0.6
LINC00871-202ENST00000556071 A6NJY4 79 aa11.31□□□□□ -0.6
LINC00871-202ENST00000556071 M0R2N6 131 aa11.31□□□□□ -0.6
LINC00871-202ENST00000556071 EPHA4P54764 986 aa11.31□□□□□ -0.6
LINC00871-202ENST00000556071 MTFR1Q15390 333 aa11.31□□□□□ -0.6
LINC00871-202ENST00000556071 LYSMD3Q7Z3D4 306 aa11.31□□□□□ -0.6
LINC00871-202ENST00000556071 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.3□□□□□ -0.6
LINC00871-202ENST00000556071 USP3Q9Y6I4 520 aa11.3□□□□□ -0.6
LINC00871-202ENST00000556071 LGR5O75473 907 aa11.29□□□□□ -0.6
LINC00871-202ENST00000556071 RHOQP17081 205 aa11.29□□□□□ -0.6
LINC00871-202ENST00000556071 TMEM164Q5U3C3 297 aa11.29□□□□□ -0.6
LINC00871-202ENST00000556071 TMEM214Q6NUQ4 689 aaKnown RBP11.29□□□□□ -0.6
LINC00871-202ENST00000556071 SCHIP1Q9P0W5 487 aaPredicted RBP11.29□□□□□ -0.6
LINC00871-202ENST00000556071 POU4F2Q12837 409 aa11.28□□□□□ -0.6
LINC00871-202ENST00000556071 PPARGC1BQ86YN6 1023 aaKnown RBP11.28□□□□□ -0.6
LINC00871-202ENST00000556071 IQSEC3Q9UPP2 1182 aaPredicted RBP11.28□□□□□ -0.6
LINC00871-202ENST00000556071 ACIN1Q9UKV3 1341 aaKnown RBP11.28□□□□□ -0.6
LINC00871-202ENST00000556071 SPATA31C2B4DYI2 1134 aa11.27□□□□□ -0.61
LINC00871-202ENST00000556071 TBCELQ5QJ74 424 aa11.27□□□□□ -0.61
LINC00871-202ENST00000556071 HINFPQ9BQA5 517 aa11.27□□□□□ -0.61
LINC00871-202ENST00000556071 CDK2AP1O14519 115 aa11.26□□□□□ -0.61
LINC00871-202ENST00000556071 GTF2E1P29083 439 aaPredicted RBP11.26□□□□□ -0.61
LINC00871-202ENST00000556071 FOXK2Q01167 660 aa11.26□□□□□ -0.61
LINC00871-202ENST00000556071 GNASQ5JWF2 1037 aa11.26□□□□□ -0.61
LINC00871-202ENST00000556071 SLC9A9Q8IVB4 645 aa11.26□□□□□ -0.61
LINC00871-202ENST00000556071 RHBDD1Q8TEB9 315 aa11.26□□□□□ -0.61
LINC00871-202ENST00000556071 TSPAN10Q9H1Z9 355 aaPredicted RBP11.26□□□□□ -0.61
LINC00871-202ENST00000556071 FAM69CQ0P6D2 419 aa11.25□□□□□ -0.61
LINC00871-202ENST00000556071 C4orf17Q53FE4 359 aa11.25□□□□□ -0.61
LINC00871-202ENST00000556071 NBPF10Q6P3W6 841 aaKnown RBP11.25□□□□□ -0.61
LINC00871-202ENST00000556071 TAS1R3Q7RTX0 852 aa11.25□□□□□ -0.61
LINC00871-202ENST00000556071 ZNF295-AS1Q8N0V1 137 aa11.25□□□□□ -0.61
LINC00871-202ENST00000556071 NBPF15Q8N660 670 aa11.25□□□□□ -0.61
LINC00871-202ENST00000556071 PHKA2P46019 1235 aa11.24□□□□□ -0.61
LINC00871-202ENST00000556071 PTSQ03393 145 aa11.24□□□□□ -0.61
LINC00871-202ENST00000556071 SENP3-EIF4A1A0A087X0R7 540 aa11.23□□□□□ -0.61
LINC00871-202ENST00000556071 SWI5Q1ZZU3 235 aa11.23□□□□□ -0.61
LINC00871-202ENST00000556071 C21orf2O43822 256 aa11.22□□□□□ -0.61
LINC00871-202ENST00000556071 CSB-PGBD3P0DP91 1061 aa11.22□□□□□ -0.61
LINC00871-202ENST00000556071 NIFKQ9BYG3 293 aaKnown RBP11.22□□□□□ -0.61
LINC00871-202ENST00000556071 CABP1Q9NZU7 370 aa11.22□□□□□ -0.61
LINC00871-202ENST00000556071 CARNS1A5YM72 827 aa11.21□□□□□ -0.61
LINC00871-202ENST00000556071 TMEM88BA6NKF7 163 aa11.21□□□□□ -0.61
LINC00871-202ENST00000556071 PLA2G4AP47712 749 aa11.21□□□□□ -0.61
LINC00871-202ENST00000556071 WDR44Q5JSH3 913 aa11.21□□□□□ -0.61
LINC00871-202ENST00000556071 RETREG2Q8NC44 543 aa11.21□□□□□ -0.61
LINC00871-202ENST00000556071 GAS2L2Q8NHY3 880 aa11.21□□□□□ -0.61
LINC00871-202ENST00000556071 SCG3Q8WXD2 468 aaKnown RBP11.21□□□□□ -0.61
LINC00871-202ENST00000556071 PARP3Q9Y6F1 533 aa11.21□□□□□ -0.61
LINC00871-202ENST00000556071 ZDHHC1Q8WTX9 485 aa11.2□□□□□ -0.62
LINC00871-202ENST00000556071 TIMMDC1Q9NPL8 285 aa11.2□□□□□ -0.62
LINC00871-202ENST00000556071 ATAD2Q6PL18 1390 aa11.19□□□□□ -0.62
LINC00871-202ENST00000556071 SLC35F4A4IF30 521 aa11.19□□□□□ -0.62
LINC00871-202ENST00000556071 PRMT3O60678 531 aa11.19□□□□□ -0.62
LINC00871-202ENST00000556071 SLAIN2Q9P270 581 aa11.19□□□□□ -0.62
LINC00871-202ENST00000556071 PPP1R12BO60237 982 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms