RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 KCNQ2O43526 872 aa9.98□□□□□ -0.81
TDP1-214ENST00000556063 BAG6P46379 1132 aa9.98□□□□□ -0.81
TDP1-214ENST00000556063 TAF7Q15545 349 aaPredicted RBP9.98□□□□□ -0.81
TDP1-214ENST00000556063 NFATC2IPQ8NCF5 419 aa9.98□□□□□ -0.81
TDP1-214ENST00000556063 NHSQ6T4R5 1651 aa9.98□□□□□ -0.81
TDP1-214ENST00000556063 CEMIPQ8WUJ3 1361 aa9.98□□□□□ -0.81
TDP1-214ENST00000556063 ITGB4P16144 1822 aa9.98□□□□□ -0.81
TDP1-214ENST00000556063 APBA3O96018 575 aa9.97□□□□□ -0.81
TDP1-214ENST00000556063 DCTN1Q14203 1278 aa9.97□□□□□ -0.81
TDP1-214ENST00000556063 TTC5Q8N0Z6 440 aa9.97□□□□□ -0.81
TDP1-214ENST00000556063 PIGBQ92521 554 aa9.97□□□□□ -0.81
TDP1-214ENST00000556063 BABAM1Q9NWV8 329 aa9.97□□□□□ -0.81
TDP1-214ENST00000556063 TRIM35Q9UPQ4 493 aa9.97□□□□□ -0.81
TDP1-214ENST00000556063 SALL2Q9Y467 1007 aaPredicted RBP9.97□□□□□ -0.81
TDP1-214ENST00000556063 ADAMTS7Q9UKP4 1686 aa9.96□□□□□ -0.81
TDP1-214ENST00000556063 BTBD11A6QL63 1104 aa9.96□□□□□ -0.82
TDP1-214ENST00000556063 WDR63Q8IWG1 891 aa9.96□□□□□ -0.82
TDP1-214ENST00000556063 WWC1Q8IX03 1113 aa9.96□□□□□ -0.82
TDP1-214ENST00000556063 THUMPD2Q9BTF0 503 aaKnown RBP9.96□□□□□ -0.82
TDP1-214ENST00000556063 MRC1P22897 1456 aa9.96□□□□□ -0.82
TDP1-214ENST00000556063 PLSCR1O15162 318 aa9.95□□□□□ -0.82
TDP1-214ENST00000556063 GNAI1P63096 354 aa9.95□□□□□ -0.82
TDP1-214ENST00000556063 HNRNPUQ00839 825 aaKnown RBP eCLIP9.95□□□□□ -0.82
TDP1-214ENST00000556063 UPF1Q92900 1129 aaKnown RBP eCLIP9.95□□□□□ -0.82
TDP1-214ENST00000556063 IL16Q14005 1332 aa9.95□□□□□ -0.82
TDP1-214ENST00000556063 TOGARAM1Q9Y4F4 1720 aa9.95□□□□□ -0.82
TDP1-214ENST00000556063 BTAF1O14981 1849 aa9.95□□□□□ -0.82
TDP1-214ENST00000556063 PALLDQ8WX93 1383 aa9.94□□□□□ -0.82
TDP1-214ENST00000556063 CFAP44Q96MT7 982 aa9.94□□□□□ -0.82
TDP1-214ENST00000556063 ATG3Q9NT62 314 aa9.94□□□□□ -0.82
TDP1-214ENST00000556063 IFT57Q9NWB7 429 aa9.94□□□□□ -0.82
TDP1-214ENST00000556063 TSPYL4Q9UJ04 414 aa9.94□□□□□ -0.82
TDP1-214ENST00000556063 ASAP1Q9ULH1 1129 aa9.94□□□□□ -0.82
TDP1-214ENST00000556063 LAS1LQ9Y4W2 734 aaKnown RBP9.94□□□□□ -0.82
TDP1-214ENST00000556063 SENP3-EIF4A1A0A087X0R7 540 aa9.93□□□□□ -0.82
TDP1-214ENST00000556063 CHL1O00533 1208 aa9.93□□□□□ -0.82
TDP1-214ENST00000556063 SLC27A3Q5K4L6 730 aa9.93□□□□□ -0.82
TDP1-214ENST00000556063 ZNF790Q6PG37 636 aa9.93□□□□□ -0.82
TDP1-214ENST00000556063 PPP4R3CPQ6ZMV5 832 aa9.93□□□□□ -0.82
TDP1-214ENST00000556063 PTF1AQ7RTS3 328 aa9.93□□□□□ -0.82
TDP1-214ENST00000556063 FMNL2Q96PY5 1086 aa9.93□□□□□ -0.82
TDP1-214ENST00000556063 MYH16Q9H6N6 1097 aa9.93□□□□□ -0.82
TDP1-214ENST00000556063 LOC102724428A0A0B4J2F2 783 aa9.92□□□□□ -0.82
TDP1-214ENST00000556063 PTCD1O75127 700 aaKnown RBP9.92□□□□□ -0.82
TDP1-214ENST00000556063 SIK1P57059 783 aa9.92□□□□□ -0.82
TDP1-214ENST00000556063 GOLGA2Q08379 1002 aa9.92□□□□□ -0.82
TDP1-214ENST00000556063 SLC39A6Q13433 755 aa9.92□□□□□ -0.82
TDP1-214ENST00000556063 RBM42Q9BTD8 480 aaKnown RBP9.92□□□□□ -0.82
TDP1-214ENST00000556063 TEX13AQ9BXU3 409 aaPredicted RBP9.92□□□□□ -0.82
TDP1-214ENST00000556063 SIPA1L3O60292 1781 aaPredicted RBP9.92□□□□□ -0.82
TDP1-214ENST00000556063 TNS1Q9HBL0 1735 aaKnown RBP9.92□□□□□ -0.82
TDP1-214ENST00000556063 SOCS7O14512 581 aa9.91□□□□□ -0.82
TDP1-214ENST00000556063 EN1Q05925 392 aaPredicted RBP9.91□□□□□ -0.82
TDP1-214ENST00000556063 TXNRD1Q16881 649 aa9.91□□□□□ -0.82
TDP1-214ENST00000556063 VSIG10Q8N0Z9 540 aa9.91□□□□□ -0.82
TDP1-214ENST00000556063 CHMP4AQ9BY43 222 aa9.91□□□□□ -0.82
TDP1-214ENST00000556063 MIS18AQ9NYP9 233 aa9.91□□□□□ -0.82
TDP1-214ENST00000556063 CCNL1Q9UK58 526 aaPredicted RBP9.91□□□□□ -0.82
TDP1-214ENST00000556063 RGPD3A6NKT7 1758 aaPredicted RBP9.91□□□□□ -0.82
TDP1-214ENST00000556063 RGPD4Q7Z3J3 1758 aa9.91□□□□□ -0.82
TDP1-214ENST00000556063 ZBED9Q6R2W3 1325 aa9.9□□□□□ -0.82
TDP1-214ENST00000556063 ZNF521Q96K83 1311 aa9.9□□□□□ -0.82
TDP1-214ENST00000556063 E9PSI1 815 aa9.9□□□□□ -0.82
TDP1-214ENST00000556063 SNRPA1P09661 255 aaKnown RBP9.9□□□□□ -0.82
TDP1-214ENST00000556063 ZNF853P0CG23 659 aa9.9□□□□□ -0.82
TDP1-214ENST00000556063 ATP6V1AP38606 617 aa9.9□□□□□ -0.82
TDP1-214ENST00000556063 DEFB132Q7Z7B7 95 aa9.9□□□□□ -0.82
TDP1-214ENST00000556063 ZNF496Q96IT1 587 aaPredicted RBP9.9□□□□□ -0.82
TDP1-214ENST00000556063 CAMKK2Q96RR4 588 aa9.9□□□□□ -0.82
TDP1-214ENST00000556063 RNF216Q9NWF9 866 aaPredicted RBP9.9□□□□□ -0.82
TDP1-214ENST00000556063 HEG1Q9ULI3 1381 aa9.89□□□□□ -0.83
TDP1-214ENST00000556063 STARD3NLO95772 234 aa9.89□□□□□ -0.83
TDP1-214ENST00000556063 EIF4A1P60842 406 aaKnown RBP9.89□□□□□ -0.83
TDP1-214ENST00000556063 EZH2Q15910 746 aaKnown RBP9.89□□□□□ -0.83
TDP1-214ENST00000556063 NBPF14Q5TI25 921 aa9.89□□□□□ -0.83
TDP1-214ENST00000556063 MBIPQ9NS73 344 aa9.89□□□□□ -0.83
TDP1-214ENST00000556063 SOS1Q07889 1333 aaPredicted RBP9.88□□□□□ -0.83
TDP1-214ENST00000556063 LY75O60449 1722 aa9.88□□□□□ -0.83
TDP1-214ENST00000556063 KCNQ3O43525 872 aa9.88□□□□□ -0.83
TDP1-214ENST00000556063 PAPPAQ13219 1627 aa9.88□□□□□ -0.83
TDP1-214ENST00000556063 KDM3BQ7LBC6 1761 aa9.88□□□□□ -0.83
TDP1-214ENST00000556063 GIGYF1O75420 1035 aaPredicted RBP9.87□□□□□ -0.83
TDP1-214ENST00000556063 HOXB7P09629 217 aa9.87□□□□□ -0.83
TDP1-214ENST00000556063 SLFN5Q08AF3 891 aa9.87□□□□□ -0.83
TDP1-214ENST00000556063 NPM2Q86SE8 214 aaKnown RBP9.87□□□□□ -0.83
TDP1-214ENST00000556063 PROM2Q8N271 834 aa9.87□□□□□ -0.83
TDP1-214ENST00000556063 UBR2Q8IWV8 1755 aa9.87□□□□□ -0.83
TDP1-214ENST00000556063 KCPQ6ZWJ8 1503 aa9.87□□□□□ -0.83
TDP1-214ENST00000556063 ZNF831Q5JPB2 1677 aa9.87□□□□□ -0.83
TDP1-214ENST00000556063 FANCIQ9NVI1 1328 aa9.86□□□□□ -0.83
TDP1-214ENST00000556063 ITPK1Q13572 414 aa9.86□□□□□ -0.83
TDP1-214ENST00000556063 RC3H1Q5TC82 1133 aaKnown RBP9.86□□□□□ -0.83
TDP1-214ENST00000556063 DUSP27Q5VZP5 1158 aa9.86□□□□□ -0.83
TDP1-214ENST00000556063 DNAJC10Q8IXB1 793 aa9.86□□□□□ -0.83
TDP1-214ENST00000556063 TSR2Q969E8 191 aaKnown RBP9.86□□□□□ -0.83
TDP1-214ENST00000556063 AK7Q96M32 723 aa9.86□□□□□ -0.83
TDP1-214ENST00000556063 YTHDC1Q96MU7 727 aaKnown RBP9.86□□□□□ -0.83
TDP1-214ENST00000556063 STK32BQ9NY57 414 aa9.86□□□□□ -0.83
TDP1-214ENST00000556063 CNTNAP4Q9C0A0 1308 aa9.85□□□□□ -0.83
TDP1-214ENST00000556063 KCNQ4P56696 695 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms