RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 NLGN1Q8N2Q7 840 aa10.59□□□□□ -0.71
PTCSC3-201ENST00000556013 LINC00116Q8NCU8 138 aa10.59□□□□□ -0.71
PTCSC3-201ENST00000556013 NLGN2Q8NFZ4 835 aa10.59□□□□□ -0.71
PTCSC3-201ENST00000556013 RTCBQ9Y3I0 505 aaKnown RBP10.59□□□□□ -0.71
PTCSC3-201ENST00000556013 ITGB4P16144 1822 aa10.58□□□□□ -0.72
PTCSC3-201ENST00000556013 CHD4Q14839 1912 aa10.58□□□□□ -0.72
PTCSC3-201ENST00000556013 NPC1L1Q9UHC9 1359 aa10.58□□□□□ -0.72
PTCSC3-201ENST00000556013 SULT6B1Q6IMI4 303 aa10.58□□□□□ -0.72
PTCSC3-201ENST00000556013 ZNF530Q6P9A1 599 aaPredicted RBP10.58□□□□□ -0.72
PTCSC3-201ENST00000556013 KIF7Q2M1P5 1343 aa10.58□□□□□ -0.72
PTCSC3-201ENST00000556013 TAF1LQ8IZX4 1826 aa10.57□□□□□ -0.72
PTCSC3-201ENST00000556013 GNPATO15228 680 aa10.57□□□□□ -0.72
PTCSC3-201ENST00000556013 RPS6KA4O75676 772 aa10.57□□□□□ -0.72
PTCSC3-201ENST00000556013 AKAP4Q5JQC9 854 aa10.57□□□□□ -0.72
PTCSC3-201ENST00000556013 AMIGO3Q86WK7 504 aa10.57□□□□□ -0.72
PTCSC3-201ENST00000556013 CNTNAP4Q9C0A0 1308 aa10.57□□□□□ -0.72
PTCSC3-201ENST00000556013 C5P01031 1676 aa10.57□□□□□ -0.72
PTCSC3-201ENST00000556013 C4BP0C0L5 1744 aa10.56□□□□□ -0.72
PTCSC3-201ENST00000556013 TGFB2P61812 414 aa10.56□□□□□ -0.72
PTCSC3-201ENST00000556013 MSL1Q68DK7 614 aa10.56□□□□□ -0.72
PTCSC3-201ENST00000556013 NFATC2IPQ8NCF5 419 aa10.56□□□□□ -0.72
PTCSC3-201ENST00000556013 SLC4A9Q96Q91 983 aa10.56□□□□□ -0.72
PTCSC3-201ENST00000556013 RBM42Q9BTD8 480 aaKnown RBP10.56□□□□□ -0.72
PTCSC3-201ENST00000556013 TUBGCP6Q96RT7 1819 aa10.56□□□□□ -0.72
PTCSC3-201ENST00000556013 TOGARAM1Q9Y4F4 1720 aa10.55□□□□□ -0.72
PTCSC3-201ENST00000556013 PHF14O94880 888 aa10.55□□□□□ -0.72
PTCSC3-201ENST00000556013 YBX3P16989 372 aaKnown RBP eCLIP10.55□□□□□ -0.72
PTCSC3-201ENST00000556013 AEBP1Q8IUX7 1158 aa10.55□□□□□ -0.72
PTCSC3-201ENST00000556013 ZNF831Q5JPB2 1677 aa10.54□□□□□ -0.72
PTCSC3-201ENST00000556013 DIAPH1O60610 1272 aaKnown RBP10.54□□□□□ -0.72
PTCSC3-201ENST00000556013 RFC4P35249 363 aa10.54□□□□□ -0.72
PTCSC3-201ENST00000556013 PELP1Q8IZL8 1130 aaKnown RBP10.54□□□□□ -0.72
PTCSC3-201ENST00000556013 ARHGEF1Q92888 912 aaKnown RBP10.54□□□□□ -0.72
PTCSC3-201ENST00000556013 GOLGB1Q14789 3259 aaKnown RBP10.54□□□□□ -0.72
PTCSC3-201ENST00000556013 KDM6AO15550 1401 aaPredicted RBP10.53□□□□□ -0.72
PTCSC3-201ENST00000556013 C1QTNF8P60827 252 aa10.53□□□□□ -0.72
PTCSC3-201ENST00000556013 SLC52A2Q9HAB3 445 aa10.53□□□□□ -0.72
PTCSC3-201ENST00000556013 UBR3Q6ZT12 1888 aa10.53□□□□□ -0.72
PTCSC3-201ENST00000556013 RNMTO43148 476 aaKnown RBP10.52□□□□□ -0.73
PTCSC3-201ENST00000556013 MMP10P09238 476 aa10.52□□□□□ -0.73
PTCSC3-201ENST00000556013 GYS1P13807 737 aa10.52□□□□□ -0.73
PTCSC3-201ENST00000556013 VSIG10Q8N0Z9 540 aa10.52□□□□□ -0.73
PTCSC3-201ENST00000556013 PTCD1O75127 700 aaKnown RBP10.51□□□□□ -0.73
PTCSC3-201ENST00000556013 SMIM5Q71RC9 77 aa10.51□□□□□ -0.73
PTCSC3-201ENST00000556013 LGR6Q9HBX8 967 aa10.51□□□□□ -0.73
PTCSC3-201ENST00000556013 CCDC87Q9NVE4 849 aa10.51□□□□□ -0.73
PTCSC3-201ENST00000556013 PARP3Q9Y6F1 533 aa10.51□□□□□ -0.73
PTCSC3-201ENST00000556013 GIGYF1O75420 1035 aaPredicted RBP10.5□□□□□ -0.73
PTCSC3-201ENST00000556013 CRKLP46109 303 aaKnown RBP10.5□□□□□ -0.73
PTCSC3-201ENST00000556013 MTHFSDQ2M296 383 aaKnown RBP10.5□□□□□ -0.73
PTCSC3-201ENST00000556013 CC2D1BQ5T0F9 858 aaKnown RBP10.5□□□□□ -0.73
PTCSC3-201ENST00000556013 HMOX1P09601 288 aa10.49□□□□□ -0.73
PTCSC3-201ENST00000556013 INTS5Q6P9B9 1019 aaKnown RBP10.49□□□□□ -0.73
PTCSC3-201ENST00000556013 GAS2L2Q8NHY3 880 aa10.49□□□□□ -0.73
PTCSC3-201ENST00000556013 TEX13AQ9BXU3 409 aaPredicted RBP10.49□□□□□ -0.73
PTCSC3-201ENST00000556013 CYP19A1P11511 503 aaPredicted RBP10.48□□□□□ -0.73
PTCSC3-201ENST00000556013 TM4SF1P30408 202 aa10.48□□□□□ -0.73
PTCSC3-201ENST00000556013 USP42Q9H9J4 1324 aaKnown RBP10.48□□□□□ -0.73
PTCSC3-201ENST00000556013 ZPR1O75312 459 aa10.47□□□□□ -0.73
PTCSC3-201ENST00000556013 DNAJC10Q8IXB1 793 aa10.47□□□□□ -0.73
PTCSC3-201ENST00000556013 CFAP53Q96M91 514 aa10.47□□□□□ -0.73
PTCSC3-201ENST00000556013 NARFQ9UHQ1 456 aa10.47□□□□□ -0.73
PTCSC3-201ENST00000556013 NUDCQ9Y266 331 aa10.47□□□□□ -0.73
PTCSC3-201ENST00000556013 GNAT3A8MTJ3 354 aa10.46□□□□□ -0.73
PTCSC3-201ENST00000556013 STARD3NLO95772 234 aa10.46□□□□□ -0.73
PTCSC3-201ENST00000556013 GPBP1L1Q9HC44 474 aaPredicted RBP10.46□□□□□ -0.73
PTCSC3-201ENST00000556013 PIM2Q9P1W9 311 aa10.46□□□□□ -0.73
PTCSC3-201ENST00000556013 ADCY9O60503 1353 aa10.46□□□□□ -0.74
PTCSC3-201ENST00000556013 MYH14Q7Z406 1995 aaKnown RBP10.46□□□□□ -0.74
PTCSC3-201ENST00000556013 C10orf71Q711Q0 1435 aa10.45□□□□□ -0.74
PTCSC3-201ENST00000556013 SOS1Q07889 1333 aaPredicted RBP10.45□□□□□ -0.74
PTCSC3-201ENST00000556013 A0A087WZG4 1122 aa10.45□□□□□ -0.74
PTCSC3-201ENST00000556013 A0A0G2JLW4 131 aa10.45□□□□□ -0.74
PTCSC3-201ENST00000556013 KCNA3P22001 575 aa10.45□□□□□ -0.74
PTCSC3-201ENST00000556013 SLC39A6Q13433 755 aa10.45□□□□□ -0.74
PTCSC3-201ENST00000556013 FKBP8Q14318 412 aa10.45□□□□□ -0.74
PTCSC3-201ENST00000556013 TTC5Q8N0Z6 440 aa10.45□□□□□ -0.74
PTCSC3-201ENST00000556013 IL17REQ8NFR9 667 aa10.45□□□□□ -0.74
PTCSC3-201ENST00000556013 SCN11AQ9UI33 1791 aa10.44□□□□□ -0.74
PTCSC3-201ENST00000556013 COL5A3P25940 1745 aaPredicted RBP10.44□□□□□ -0.74
PTCSC3-201ENST00000556013 CICQ96RK0 1608 aaPredicted RBP10.44□□□□□ -0.74
PTCSC3-201ENST00000556013 PXDNLA1KZ92 1463 aa10.44□□□□□ -0.74
PTCSC3-201ENST00000556013 MRC1P22897 1456 aa10.44□□□□□ -0.74
PTCSC3-201ENST00000556013 ATP10DQ9P241 1426 aa10.44□□□□□ -0.74
PTCSC3-201ENST00000556013 U2SURPO15042 1029 aaKnown RBP10.44□□□□□ -0.74
PTCSC3-201ENST00000556013 HTATSF1O43719 755 aaKnown RBP10.44□□□□□ -0.74
PTCSC3-201ENST00000556013 FCHSD2O94868 740 aa10.44□□□□□ -0.74
PTCSC3-201ENST00000556013 DPEP1P16444 411 aa10.44□□□□□ -0.74
PTCSC3-201ENST00000556013 EIF5P55010 431 aaKnown RBP10.44□□□□□ -0.74
PTCSC3-201ENST00000556013 TEFQ10587 303 aa10.44□□□□□ -0.74
PTCSC3-201ENST00000556013 ZNF790Q6PG37 636 aa10.44□□□□□ -0.74
PTCSC3-201ENST00000556013 PDZRN3Q9UPQ7 1066 aa10.44□□□□□ -0.74
PTCSC3-201ENST00000556013 BCS1LQ9Y276 419 aa10.44□□□□□ -0.74
PTCSC3-201ENST00000556013 SENP3-EIF4A1A0A087X0R7 540 aa10.43□□□□□ -0.74
PTCSC3-201ENST00000556013 POLRMTO00411 1230 aaKnown RBP10.43□□□□□ -0.74
PTCSC3-201ENST00000556013 USPL1Q5W0Q7 1092 aa10.43□□□□□ -0.74
PTCSC3-201ENST00000556013 SRP68Q9UHB9 627 aaKnown RBP10.43□□□□□ -0.74
PTCSC3-201ENST00000556013 COL3A1P02461 1466 aaPredicted RBP10.42□□□□□ -0.74
PTCSC3-201ENST00000556013 KIF13BQ9NQT8 1826 aa10.42□□□□□ -0.74
PTCSC3-201ENST00000556013 CEMIPQ8WUJ3 1361 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms