RNA–Protein interactions for RNA: ENST00000555964.5

XRCC3-215, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-215ENST00000555964 AMIGO3Q86WK7 504 aa23.27■■□□□ 1.32
XRCC3-215ENST00000555964 ATG3Q9NT62 314 aa23.26■■□□□ 1.31
XRCC3-215ENST00000555964 ITPK1Q13572 414 aa23.25■■□□□ 1.31
XRCC3-215ENST00000555964 AMOTQ4VCS5 1084 aa23.25■■□□□ 1.31
XRCC3-215ENST00000555964 PLEKHO1Q53GL0 409 aaPredicted RBP23.25■■□□□ 1.31
XRCC3-215ENST00000555964 DCAF5Q96JK2 942 aa23.25■■□□□ 1.31
XRCC3-215ENST00000555964 GPBP1L1Q9HC44 474 aaPredicted RBP23.25■■□□□ 1.31
XRCC3-215ENST00000555964 KDRP35968 1356 aa23.25■■□□□ 1.31
XRCC3-215ENST00000555964 KIF13BQ9NQT8 1826 aa23.24■■□□□ 1.31
XRCC3-215ENST00000555964 ADRA2BP18089 450 aa23.24■■□□□ 1.31
XRCC3-215ENST00000555964 RTCBQ9Y3I0 505 aaKnown RBP23.24■■□□□ 1.31
XRCC3-215ENST00000555964 COL5A3P25940 1745 aaPredicted RBP23.24■■□□□ 1.31
XRCC3-215ENST00000555964 ADCY9O60503 1353 aa23.24■■□□□ 1.31
XRCC3-215ENST00000555964 TRAPPC3LQ5T215 181 aa23.22■■□□□ 1.31
XRCC3-215ENST00000555964 PCGF6Q9BYE7 350 aa23.22■■□□□ 1.31
XRCC3-215ENST00000555964 RC3H1Q5TC82 1133 aaKnown RBP23.21■■□□□ 1.31
XRCC3-215ENST00000555964 NLGN1Q8N2Q7 840 aa23.21■■□□□ 1.31
XRCC3-215ENST00000555964 PANK3Q9H999 370 aa23.21■■□□□ 1.31
XRCC3-215ENST00000555964 CICQ96RK0 1608 aaPredicted RBP23.2■■□□□ 1.3
XRCC3-215ENST00000555964 CNTNAP4Q9C0A0 1308 aa23.2■■□□□ 1.3
XRCC3-215ENST00000555964 MMP10P09238 476 aa23.2■■□□□ 1.3
XRCC3-215ENST00000555964 ZNF530Q6P9A1 599 aaPredicted RBP23.2■■□□□ 1.3
XRCC3-215ENST00000555964 SMIM5Q71RC9 77 aa23.2■■□□□ 1.3
XRCC3-215ENST00000555964 RBM42Q9BTD8 480 aaKnown RBP23.2■■□□□ 1.3
XRCC3-215ENST00000555964 CABP4P57796 275 aa23.19■■□□□ 1.3
XRCC3-215ENST00000555964 C1orf141Q5JVX7 400 aa23.19■■□□□ 1.3
XRCC3-215ENST00000555964 MORC1Q86VD1 984 aa23.18■■□□□ 1.3
XRCC3-215ENST00000555964 HSPA5P11021 654 aaKnown RBP23.17■■□□□ 1.3
XRCC3-215ENST00000555964 TGFB2P61812 414 aa23.17■■□□□ 1.3
XRCC3-215ENST00000555964 KDM6AO15550 1401 aaPredicted RBP23.16■■□□□ 1.3
XRCC3-215ENST00000555964 RFC4P35249 363 aa23.16■■□□□ 1.3
XRCC3-215ENST00000555964 MTHFSP49914 203 aa23.16■■□□□ 1.3
XRCC3-215ENST00000555964 CCDC87Q9NVE4 849 aa23.16■■□□□ 1.3
XRCC3-215ENST00000555964 C4AP0C0L4 1744 aa23.16■■□□□ 1.3
XRCC3-215ENST00000555964 N4BP2Q86UW6 1770 aaPredicted RBP23.15■■□□□ 1.3
XRCC3-215ENST00000555964 MYH14Q7Z406 1995 aaKnown RBP23.15■■□□□ 1.3
XRCC3-215ENST00000555964 WWC3Q9ULE0 1092 aa23.15■■□□□ 1.3
XRCC3-215ENST00000555964 KNSTRNQ9Y448 316 aa23.15■■□□□ 1.3
XRCC3-215ENST00000555964 PXDNLA1KZ92 1463 aa23.15■■□□□ 1.3
XRCC3-215ENST00000555964 C10orf71Q711Q0 1435 aa23.15■■□□□ 1.3
XRCC3-215ENST00000555964 RPS6KA4O75676 772 aa23.14■■□□□ 1.29
XRCC3-215ENST00000555964 SCN11AQ9UI33 1791 aa23.14■■□□□ 1.29
XRCC3-215ENST00000555964 KIAA1551Q9HCM1 1747 aa23.13■■□□□ 1.29
XRCC3-215ENST00000555964 ZNF526Q8TF50 670 aaPredicted RBP23.13■■□□□ 1.29
XRCC3-215ENST00000555964 ARHGEF1Q92888 912 aaKnown RBP23.13■■□□□ 1.29
XRCC3-215ENST00000555964 PARP3Q9Y6F1 533 aa23.13■■□□□ 1.29
XRCC3-215ENST00000555964 SLC4A9Q96Q91 983 aa23.12■■□□□ 1.29
XRCC3-215ENST00000555964 BRCA1P38398 1863 aaKnown RBP23.11■■□□□ 1.29
XRCC3-215ENST00000555964 SULT6B1Q6IMI4 303 aa23.1■■□□□ 1.29
XRCC3-215ENST00000555964 GYS1P13807 737 aa23.09■■□□□ 1.29
XRCC3-215ENST00000555964 HSPA6P17066 643 aa23.09■■□□□ 1.29
XRCC3-215ENST00000555964 AEBP1Q8IUX7 1158 aa23.09■■□□□ 1.29
XRCC3-215ENST00000555964 BCS1LQ9Y276 419 aa23.09■■□□□ 1.29
XRCC3-215ENST00000555964 ARFGEF1Q9Y6D6 1849 aa23.09■■□□□ 1.29
XRCC3-215ENST00000555964 PTCD1O75127 700 aaKnown RBP23.08■■□□□ 1.29
XRCC3-215ENST00000555964 TJP1Q07157 1748 aa23.08■■□□□ 1.28
XRCC3-215ENST00000555964 NFATC2IPQ8NCF5 419 aa23.07■■□□□ 1.28
XRCC3-215ENST00000555964 VIRMAQ69YN4 1812 aaKnown RBP23.07■■□□□ 1.28
XRCC3-215ENST00000555964 CRKLP46109 303 aaKnown RBP23.06■■□□□ 1.28
XRCC3-215ENST00000555964 A0A0G2JLW4 131 aa23.05■■□□□ 1.28
XRCC3-215ENST00000555964 AKAP4Q5JQC9 854 aa23.05■■□□□ 1.28
XRCC3-215ENST00000555964 FCHSD2O94868 740 aa23.04■■□□□ 1.28
XRCC3-215ENST00000555964 IL13P35225 146 aa23.04■■□□□ 1.28
XRCC3-215ENST00000555964 CCER1Q8TC90 406 aaPredicted RBP23.04■■□□□ 1.28
XRCC3-215ENST00000555964 DPEP1P16444 411 aa23.03■■□□□ 1.28
XRCC3-215ENST00000555964 USP42Q9H9J4 1324 aaKnown RBP23.03■■□□□ 1.28
XRCC3-215ENST00000555964 ARHGAP27Q6ZUM4 889 aa23.02■■□□□ 1.28
XRCC3-215ENST00000555964 MRC1P22897 1456 aa23.01■■□□□ 1.27
XRCC3-215ENST00000555964 KIF3CO14782 793 aa23.01■■□□□ 1.27
XRCC3-215ENST00000555964 PIM2Q9P1W9 311 aa23.01■■□□□ 1.27
XRCC3-215ENST00000555964 AMER1Q5JTC6 1135 aaPredicted RBP23■■□□□ 1.27
XRCC3-215ENST00000555964 SLC52A2Q9HAB3 445 aa23■■□□□ 1.27
XRCC3-215ENST00000555964 ZPR1O75312 459 aa22.99■■□□□ 1.27
XRCC3-215ENST00000555964 SRP68Q9UHB9 627 aaKnown RBP22.98■■□□□ 1.27
XRCC3-215ENST00000555964 CEP350Q5VT06 3117 aa22.97■■□□□ 1.27
XRCC3-215ENST00000555964 FKBP8Q14318 412 aa22.97■■□□□ 1.27
XRCC3-215ENST00000555964 DALRD3Q5D0E6 543 aaKnown RBP22.97■■□□□ 1.27
XRCC3-215ENST00000555964 ADAMTS7Q9UKP4 1686 aa22.97■■□□□ 1.27
XRCC3-215ENST00000555964 TOMM70O94826 608 aa22.96■■□□□ 1.27
XRCC3-215ENST00000555964 APLP1P51693 650 aa22.95■■□□□ 1.26
XRCC3-215ENST00000555964 SOS1Q07889 1333 aaPredicted RBP22.95■■□□□ 1.26
XRCC3-215ENST00000555964 INTS5Q6P9B9 1019 aaKnown RBP22.95■■□□□ 1.26
XRCC3-215ENST00000555964 KIF7Q2M1P5 1343 aa22.94■■□□□ 1.26
XRCC3-215ENST00000555964 RNMTO43148 476 aaKnown RBP22.94■■□□□ 1.26
XRCC3-215ENST00000555964 DDR1Q08345 913 aa22.94■■□□□ 1.26
XRCC3-215ENST00000555964 DNAJC10Q8IXB1 793 aa22.94■■□□□ 1.26
XRCC3-215ENST00000555964 DIAPH1O60610 1272 aaKnown RBP22.93■■□□□ 1.26
XRCC3-215ENST00000555964 KCNA3P22001 575 aa22.93■■□□□ 1.26
XRCC3-215ENST00000555964 IFFO2Q5TF58 517 aa22.93■■□□□ 1.26
XRCC3-215ENST00000555964 C9orf131Q5VYM1 1079 aa22.93■■□□□ 1.26
XRCC3-215ENST00000555964 VSIG10Q8N0Z9 540 aa22.93■■□□□ 1.26
XRCC3-215ENST00000555964 AFDNP55196 1824 aaKnown RBP22.92■■□□□ 1.26
XRCC3-215ENST00000555964 UBR2Q8IWV8 1755 aa22.92■■□□□ 1.26
XRCC3-215ENST00000555964 POLRMTO00411 1230 aaKnown RBP22.92■■□□□ 1.26
XRCC3-215ENST00000555964 HMOX1P09601 288 aa22.92■■□□□ 1.26
XRCC3-215ENST00000555964 C16orf71Q8IYS4 520 aaPredicted RBP22.92■■□□□ 1.26
XRCC3-215ENST00000555964 KCPQ6ZWJ8 1503 aa22.92■■□□□ 1.26
XRCC3-215ENST00000555964 SBF1O95248 1867 aa22.92■■□□□ 1.26
XRCC3-215ENST00000555964 COL15A1P39059 1388 aa22.91■■□□□ 1.26
XRCC3-215ENST00000555964 KDM2BQ8NHM5 1336 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms