RNA–Protein interactions for RNA: ENST00000555941.1

LRP1-209, Transcript of LDL receptor related protein 1, humanhuman

TSL 3

Gene LRP1, Length 499 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-209ENST00000555941 PELP1Q8IZL8 1130 aaKnown RBP15.71■□□□□ 0.11
LRP1-209ENST00000555941 LINC00116Q8NCU8 138 aa15.71■□□□□ 0.11
LRP1-209ENST00000555941 ITPK1Q13572 414 aa15.69■□□□□ 0.1
LRP1-209ENST00000555941 ZNF530Q6P9A1 599 aaPredicted RBP15.69■□□□□ 0.1
LRP1-209ENST00000555941 GNPATO15228 680 aa15.68■□□□□ 0.1
LRP1-209ENST00000555941 PHF14O94880 888 aa15.68■□□□□ 0.1
LRP1-209ENST00000555941 AMIGO3Q86WK7 504 aa15.68■□□□□ 0.1
LRP1-209ENST00000555941 KDRP35968 1356 aa15.67■□□□□ 0.1
LRP1-209ENST00000555941 YBX3P16989 372 aaKnown RBP eCLIP15.67■□□□□ 0.1
LRP1-209ENST00000555941 MTHFSP49914 203 aa15.67■□□□□ 0.1
LRP1-209ENST00000555941 CABP4P57796 275 aa15.67■□□□□ 0.1
LRP1-209ENST00000555941 AMER1Q5JTC6 1135 aaPredicted RBP15.67■□□□□ 0.1
LRP1-209ENST00000555941 C1orf141Q5JVX7 400 aa15.67■□□□□ 0.1
LRP1-209ENST00000555941 RC3H1Q5TC82 1133 aaKnown RBP15.67■□□□□ 0.1
LRP1-209ENST00000555941 ADRA2BP18089 450 aa15.66■□□□□ 0.1
LRP1-209ENST00000555941 IL13P35225 146 aa15.66■□□□□ 0.1
LRP1-209ENST00000555941 SULT6B1Q6IMI4 303 aa15.66■□□□□ 0.1
LRP1-209ENST00000555941 RTCBQ9Y3I0 505 aaKnown RBP15.66■□□□□ 0.1
LRP1-209ENST00000555941 KIF7Q2M1P5 1343 aa15.66■□□□□ 0.1
LRP1-209ENST00000555941 GOLGB1Q14789 3259 aaKnown RBP15.65■□□□□ 0.1
LRP1-209ENST00000555941 TRAPPC3LQ5T215 181 aa15.65■□□□□ 0.1
LRP1-209ENST00000555941 AEBP1Q8IUX7 1158 aa15.65■□□□□ 0.1
LRP1-209ENST00000555941 KDM6AO15550 1401 aaPredicted RBP15.65■□□□□ 0.1
LRP1-209ENST00000555941 CNTNAP4Q9C0A0 1308 aa15.65■□□□□ 0.1
LRP1-209ENST00000555941 NLGN1Q8N2Q7 840 aa15.64■□□□□ 0.09
LRP1-209ENST00000555941 RBM42Q9BTD8 480 aaKnown RBP15.64■□□□□ 0.09
LRP1-209ENST00000555941 SMIM5Q71RC9 77 aa15.63■□□□□ 0.09
LRP1-209ENST00000555941 SLC4A9Q96Q91 983 aa15.63■□□□□ 0.09
LRP1-209ENST00000555941 PER1O15534 1290 aaPredicted RBP15.62■□□□□ 0.09
LRP1-209ENST00000555941 RPS6KA4O75676 772 aa15.62■□□□□ 0.09
LRP1-209ENST00000555941 C1QTNF8P60827 252 aa15.62■□□□□ 0.09
LRP1-209ENST00000555941 NFATC2IPQ8NCF5 419 aa15.62■□□□□ 0.09
LRP1-209ENST00000555941 COL5A3P25940 1745 aaPredicted RBP15.62■□□□□ 0.09
LRP1-209ENST00000555941 MMP10P09238 476 aa15.61■□□□□ 0.09
LRP1-209ENST00000555941 AKAP4Q5JQC9 854 aa15.61■□□□□ 0.09
LRP1-209ENST00000555941 SCN11AQ9UI33 1791 aa15.6■□□□□ 0.09
LRP1-209ENST00000555941 RFC4P35249 363 aa15.6■□□□□ 0.09
LRP1-209ENST00000555941 ARHGEF1Q92888 912 aaKnown RBP15.6■□□□□ 0.09
LRP1-209ENST00000555941 NPC1L1Q9UHC9 1359 aa15.6■□□□□ 0.09
LRP1-209ENST00000555941 GIGYF1O75420 1035 aaPredicted RBP15.59■□□□□ 0.09
LRP1-209ENST00000555941 CICQ96RK0 1608 aaPredicted RBP15.58■□□□□ 0.09
LRP1-209ENST00000555941 PTCD1O75127 700 aaKnown RBP15.58■□□□□ 0.08
LRP1-209ENST00000555941 TGFB2P61812 414 aa15.58■□□□□ 0.08
LRP1-209ENST00000555941 KIF13BQ9NQT8 1826 aa15.58■□□□□ 0.08
LRP1-209ENST00000555941 MYH14Q7Z406 1995 aaKnown RBP15.57■□□□□ 0.08
LRP1-209ENST00000555941 DIAPH1O60610 1272 aaKnown RBP15.57■□□□□ 0.08
LRP1-209ENST00000555941 GYS1P13807 737 aa15.57■□□□□ 0.08
LRP1-209ENST00000555941 SLC52A2Q9HAB3 445 aa15.57■□□□□ 0.08
LRP1-209ENST00000555941 CRKLP46109 303 aaKnown RBP15.56■□□□□ 0.08
LRP1-209ENST00000555941 CCDC87Q9NVE4 849 aa15.56■□□□□ 0.08
LRP1-209ENST00000555941 CC2D1BQ5T0F9 858 aaKnown RBP15.55■□□□□ 0.08
LRP1-209ENST00000555941 PARP3Q9Y6F1 533 aa15.55■□□□□ 0.08
LRP1-209ENST00000555941 C4AP0C0L4 1744 aa15.54■□□□□ 0.08
LRP1-209ENST00000555941 MRC1P22897 1456 aa15.54■□□□□ 0.08
LRP1-209ENST00000555941 C10orf71Q711Q0 1435 aa15.54■□□□□ 0.08
LRP1-209ENST00000555941 ATP10DQ9P241 1426 aa15.54■□□□□ 0.08
LRP1-209ENST00000555941 ADCY9O60503 1353 aa15.54■□□□□ 0.08
LRP1-209ENST00000555941 RNMTO43148 476 aaKnown RBP15.54■□□□□ 0.08
LRP1-209ENST00000555941 HMOX1P09601 288 aa15.54■□□□□ 0.08
LRP1-209ENST00000555941 LGR6Q9HBX8 967 aa15.54■□□□□ 0.08
LRP1-209ENST00000555941 TJP1Q07157 1748 aa15.54■□□□□ 0.08
LRP1-209ENST00000555941 PXDNLA1KZ92 1463 aa15.53■□□□□ 0.08
LRP1-209ENST00000555941 SENP3-EIF4A1A0A087X0R7 540 aa15.53■□□□□ 0.08
LRP1-209ENST00000555941 USP42Q9H9J4 1324 aaKnown RBP15.52■□□□□ 0.08
LRP1-209ENST00000555941 ADAMTS7Q9UKP4 1686 aa15.52■□□□□ 0.08
LRP1-209ENST00000555941 MTHFSDQ2M296 383 aaKnown RBP15.52■□□□□ 0.08
LRP1-209ENST00000555941 INTS5Q6P9B9 1019 aaKnown RBP15.52■□□□□ 0.08
LRP1-209ENST00000555941 VSIG10Q8N0Z9 540 aa15.52■□□□□ 0.08
LRP1-209ENST00000555941 GPBP1L1Q9HC44 474 aaPredicted RBP15.52■□□□□ 0.08
LRP1-209ENST00000555941 VIRMAQ69YN4 1812 aaKnown RBP15.52■□□□□ 0.07
LRP1-209ENST00000555941 KIAA1551Q9HCM1 1747 aa15.51■□□□□ 0.07
LRP1-209ENST00000555941 A0A0G2JLW4 131 aa15.5■□□□□ 0.07
LRP1-209ENST00000555941 CYP19A1P11511 503 aaPredicted RBP15.5■□□□□ 0.07
LRP1-209ENST00000555941 DNAJC10Q8IXB1 793 aa15.5■□□□□ 0.07
LRP1-209ENST00000555941 N4BP2Q86UW6 1770 aaPredicted RBP15.49■□□□□ 0.07
LRP1-209ENST00000555941 COL3A1P02461 1466 aaPredicted RBP15.49■□□□□ 0.07
LRP1-209ENST00000555941 ZPR1O75312 459 aa15.49■□□□□ 0.07
LRP1-209ENST00000555941 FKBP8Q14318 412 aa15.49■□□□□ 0.07
LRP1-209ENST00000555941 GAS2L2Q8NHY3 880 aa15.49■□□□□ 0.07
LRP1-209ENST00000555941 WWC3Q9ULE0 1092 aa15.49■□□□□ 0.07
LRP1-209ENST00000555941 SOS1Q07889 1333 aaPredicted RBP15.48■□□□□ 0.07
LRP1-209ENST00000555941 DPEP1P16444 411 aa15.48■□□□□ 0.07
LRP1-209ENST00000555941 SLC39A6Q13433 755 aa15.48■□□□□ 0.07
LRP1-209ENST00000555941 SRP68Q9UHB9 627 aaKnown RBP15.48■□□□□ 0.07
LRP1-209ENST00000555941 BCS1LQ9Y276 419 aa15.48■□□□□ 0.07
LRP1-209ENST00000555941 KCPQ6ZWJ8 1503 aa15.48■□□□□ 0.07
LRP1-209ENST00000555941 GNAT3A8MTJ3 354 aa15.47■□□□□ 0.07
LRP1-209ENST00000555941 U2SURPO15042 1029 aaKnown RBP15.47■□□□□ 0.07
LRP1-209ENST00000555941 TM4SF1P30408 202 aa15.47■□□□□ 0.07
LRP1-209ENST00000555941 BRCA1P38398 1863 aaKnown RBP15.47■□□□□ 0.07
LRP1-209ENST00000555941 CFAP53Q96M91 514 aa15.47■□□□□ 0.07
LRP1-209ENST00000555941 PIM2Q9P1W9 311 aa15.47■□□□□ 0.07
LRP1-209ENST00000555941 FCHSD2O94868 740 aa15.46■□□□□ 0.07
LRP1-209ENST00000555941 STARD3NLO95772 234 aa15.46■□□□□ 0.07
LRP1-209ENST00000555941 KCNA3P22001 575 aa15.46■□□□□ 0.07
LRP1-209ENST00000555941 DDR1Q08345 913 aa15.46■□□□□ 0.07
LRP1-209ENST00000555941 TTC5Q8N0Z6 440 aa15.46■□□□□ 0.07
LRP1-209ENST00000555941 TEX13AQ9BXU3 409 aaPredicted RBP15.46■□□□□ 0.07
LRP1-209ENST00000555941 NARFQ9UHQ1 456 aa15.46■□□□□ 0.07
LRP1-209ENST00000555941 UBR2Q8IWV8 1755 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms