RNA–Protein interactions for RNA: ENST00000555867.1

PSEN1-214, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 876 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-214ENST00000555867 PRKRIP1Q9H875 184 aaPredicted RBP8.83□□□□□ -1
PSEN1-214ENST00000555867 PRDM11Q9NQV5 511 aa8.83□□□□□ -1
PSEN1-214ENST00000555867 STRN4Q9NRL3 753 aa8.83□□□□□ -1
PSEN1-214ENST00000555867 GOLGB1Q14789 3259 aaKnown RBP8.83□□□□□ -1
PSEN1-214ENST00000555867 PPLO60437 1756 aa8.82□□□□□ -1
PSEN1-214ENST00000555867 SLC24A1O60721 1099 aa8.82□□□□□ -1
PSEN1-214ENST00000555867 DDX27Q96GQ7 796 aaKnown RBP8.82□□□□□ -1
PSEN1-214ENST00000555867 ADAM33Q9BZ11 813 aa8.82□□□□□ -1
PSEN1-214ENST00000555867 TRPM3Q9HCF6 1732 aaPredicted RBP8.82□□□□□ -1
PSEN1-214ENST00000555867 PLSCR1O15162 318 aa8.81□□□□□ -1
PSEN1-214ENST00000555867 BARGINQ6ZT62 677 aa8.81□□□□□ -1
PSEN1-214ENST00000555867 KDM2AQ9Y2K7 1162 aa8.81□□□□□ -1
PSEN1-214ENST00000555867 EIF3AQ14152 1382 aaKnown RBP8.81□□□□□ -1
PSEN1-214ENST00000555867 ALS2Q96Q42 1657 aa8.81□□□□□ -1
PSEN1-214ENST00000555867 C11orf95C9JLR9 678 aaPredicted RBP8.8□□□□□ -1
PSEN1-214ENST00000555867 MAP3K9P80192 1104 aa8.8□□□□□ -1
PSEN1-214ENST00000555867 LARP6Q9BRS8 491 aaKnown RBP8.8□□□□□ -1
PSEN1-214ENST00000555867 KIAA0232Q92628 1395 aa8.8□□□□□ -1
PSEN1-214ENST00000555867 SHANK3Q9BYB0 1731 aa8.8□□□□□ -1
PSEN1-214ENST00000555867 CRYBG1Q9Y4K1 1723 aa8.8□□□□□ -1
PSEN1-214ENST00000555867 PPP1R3GB7ZBB8 358 aa8.79□□□□□ -1
PSEN1-214ENST00000555867 ZC3H6P61129 1189 aaKnown RBP8.79□□□□□ -1
PSEN1-214ENST00000555867 SAFB2Q14151 953 aaKnown RBP eCLIP8.79□□□□□ -1
PSEN1-214ENST00000555867 MFSD10Q14728 455 aa8.79□□□□□ -1
PSEN1-214ENST00000555867 GPR162Q16538 588 aa8.79□□□□□ -1
PSEN1-214ENST00000555867 LARP1Q6PKG0 1096 aaKnown RBP8.79□□□□□ -1
PSEN1-214ENST00000555867 SBF2Q86WG5 1849 aa8.78□□□□□ -1
PSEN1-214ENST00000555867 KNDC1Q76NI1 1749 aa8.78□□□□□ -1
PSEN1-214ENST00000555867 ST20-MTHFSA0A0A6YYL1 179 aa8.78□□□□□ -1
PSEN1-214ENST00000555867 GTPBP6O43824 516 aaPredicted RBP8.78□□□□□ -1
PSEN1-214ENST00000555867 RGL3Q3MIN7 710 aa8.78□□□□□ -1
PSEN1-214ENST00000555867 CDCA8Q53HL2 280 aa8.78□□□□□ -1
PSEN1-214ENST00000555867 TCP11L2Q8N4U5 519 aa8.78□□□□□ -1
PSEN1-214ENST00000555867 YTHDC2Q9H6S0 1430 aaKnown RBP8.78□□□□□ -1
PSEN1-214ENST00000555867 DLC1Q96QB1 1528 aa8.77□□□□□ -1.01
PSEN1-214ENST00000555867 NEFLP07196 543 aa8.77□□□□□ -1.01
PSEN1-214ENST00000555867 RALBP1Q15311 655 aa8.77□□□□□ -1.01
PSEN1-214ENST00000555867 SIRT1Q96EB6 747 aa8.77□□□□□ -1.01
PSEN1-214ENST00000555867 ARXQ96QS3 562 aa8.77□□□□□ -1.01
PSEN1-214ENST00000555867 MTFR1LQ9H019 292 aa8.77□□□□□ -1.01
PSEN1-214ENST00000555867 SSH2Q76I76 1423 aa8.77□□□□□ -1.01
PSEN1-214ENST00000555867 PRR36Q9H6K5 1346 aa8.77□□□□□ -1.01
PSEN1-214ENST00000555867 HSPA6P17066 643 aa8.76□□□□□ -1.01
PSEN1-214ENST00000555867 EVA1CP58658 441 aa8.76□□□□□ -1.01
PSEN1-214ENST00000555867 TMF1P82094 1093 aa8.76□□□□□ -1.01
PSEN1-214ENST00000555867 SLC15A2Q16348 729 aa8.76□□□□□ -1.01
PSEN1-214ENST00000555867 IRX2Q9BZI1 471 aaPredicted RBP8.76□□□□□ -1.01
PSEN1-214ENST00000555867 MRS2Q9HD23 443 aa8.76□□□□□ -1.01
PSEN1-214ENST00000555867 RABGEF1Q9UJ41 708 aa8.76□□□□□ -1.01
PSEN1-214ENST00000555867 PEAK1Q9H792 1746 aa8.76□□□□□ -1.01
PSEN1-214ENST00000555867 RGPD3A6NKT7 1758 aaPredicted RBP8.76□□□□□ -1.01
PSEN1-214ENST00000555867 RGPD4Q7Z3J3 1758 aa8.76□□□□□ -1.01
PSEN1-214ENST00000555867 BRD4O60885 1362 aaPredicted RBP8.75□□□□□ -1.01
PSEN1-214ENST00000555867 MAP3K5Q99683 1374 aa8.75□□□□□ -1.01
PSEN1-214ENST00000555867 TXNRD1Q16881 649 aa8.75□□□□□ -1.01
PSEN1-214ENST00000555867 NUTM2GQ5VZR2 741 aa8.75□□□□□ -1.01
PSEN1-214ENST00000555867 ANKK1Q8NFD2 765 aa8.75□□□□□ -1.01
PSEN1-214ENST00000555867 PRAM1Q96QH2 718 aa8.75□□□□□ -1.01
PSEN1-214ENST00000555867 STK32BQ9NY57 414 aa8.75□□□□□ -1.01
PSEN1-214ENST00000555867 ZBED9Q6R2W3 1325 aa8.75□□□□□ -1.01
PSEN1-214ENST00000555867 HNRNPUQ00839 825 aaKnown RBP eCLIP8.74□□□□□ -1.01
PSEN1-214ENST00000555867 FBXW7Q969H0 707 aa8.74□□□□□ -1.01
PSEN1-214ENST00000555867 EMILIN3Q9NT22 766 aa8.74□□□□□ -1.01
PSEN1-214ENST00000555867 PCDHGA10Q9Y5H3 936 aa8.74□□□□□ -1.01
PSEN1-214ENST00000555867 MYBBP1AQ9BQG0 1328 aaKnown RBP8.74□□□□□ -1.01
PSEN1-214ENST00000555867 INSRP06213 1382 aa8.73□□□□□ -1.01
PSEN1-214ENST00000555867 SBNO2Q9Y2G9 1366 aa8.73□□□□□ -1.01
PSEN1-214ENST00000555867 ANKARQ7Z5J8 1434 aa8.73□□□□□ -1.01
PSEN1-214ENST00000555867 KAT6BQ8WYB5 2073 aa8.73□□□□□ -1.01
PSEN1-214ENST00000555867 TESK2Q96S53 571 aa8.73□□□□□ -1.01
PSEN1-214ENST00000555867 OVOS2A0A0G2JMS6 1433 aa8.72□□□□□ -1.01
PSEN1-214ENST00000555867 OVOS2A0A0J9YW53 1432 aa8.72□□□□□ -1.01
PSEN1-214ENST00000555867 PIK3C2GO75747 1445 aa8.72□□□□□ -1.01
PSEN1-214ENST00000555867 OVOS2Q6IE36 1432 aa8.72□□□□□ -1.01
PSEN1-214ENST00000555867 PARP4Q9UKK3 1724 aaKnown RBP8.72□□□□□ -1.01
PSEN1-214ENST00000555867 PHF14O94880 888 aa8.72□□□□□ -1.01
PSEN1-214ENST00000555867 YBX3P16989 372 aaKnown RBP eCLIP8.72□□□□□ -1.01
PSEN1-214ENST00000555867 PROX2Q3B8N5 592 aa8.72□□□□□ -1.01
PSEN1-214ENST00000555867 NBPF1Q3BBV0 1214 aa8.72□□□□□ -1.01
PSEN1-214ENST00000555867 TYW1BQ6NUM6 668 aa8.72□□□□□ -1.01
PSEN1-214ENST00000555867 LAPTM4BQ86VI4 370 aa8.72□□□□□ -1.01
PSEN1-214ENST00000555867 MARCH10Q8NA82 808 aaPredicted RBP8.72□□□□□ -1.01
PSEN1-214ENST00000555867 NGDNQ8NEJ9 315 aaKnown RBP8.72□□□□□ -1.01
PSEN1-214ENST00000555867 NLGN2Q8NFZ4 835 aa8.72□□□□□ -1.01
PSEN1-214ENST00000555867 POLR3GLQ9BT43 218 aa8.72□□□□□ -1.01
PSEN1-214ENST00000555867 THRAP3Q9Y2W1 955 aaKnown RBP8.72□□□□□ -1.01
PSEN1-214ENST00000555867 SUPT16HQ9Y5B9 1047 aaKnown RBP8.72□□□□□ -1.01
PSEN1-214ENST00000555867 ATP10DQ9P241 1426 aa8.71□□□□□ -1.01
PSEN1-214ENST00000555867 ITGBL1O95965 494 aaPredicted RBP8.71□□□□□ -1.02
PSEN1-214ENST00000555867 CFAP70Q5T0N1 1121 aa8.71□□□□□ -1.02
PSEN1-214ENST00000555867 COL13A1Q5TAT6 717 aaPredicted RBP8.71□□□□□ -1.02
PSEN1-214ENST00000555867 ERICH6BQ5W0A0 696 aa8.71□□□□□ -1.02
PSEN1-214ENST00000555867 C14orf93Q9H972 538 aaKnown RBP8.71□□□□□ -1.02
PSEN1-214ENST00000555867 ATP7BP35670 1465 aa8.7□□□□□ -1.02
PSEN1-214ENST00000555867 PHRF1Q9P1Y6 1649 aaKnown RBP8.7□□□□□ -1.02
PSEN1-214ENST00000555867 QRICH2Q9H0J4 1663 aa8.7□□□□□ -1.02
PSEN1-214ENST00000555867 COL9A1P20849 921 aa8.7□□□□□ -1.02
PSEN1-214ENST00000555867 NLRP13Q86W25 1043 aa8.7□□□□□ -1.02
PSEN1-214ENST00000555867 DNAJC5GQ8N7S2 189 aa8.7□□□□□ -1.02
PSEN1-214ENST00000555867 NPC1L1Q9UHC9 1359 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms