RNA–Protein interactions for RNA: ENST00000555855.5

FOXN3-211, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-211ENST00000555855 TRAPPC3LQ5T215 181 aa26.76■■□□□ 1.87
FOXN3-211ENST00000555855 RTCBQ9Y3I0 505 aaKnown RBP26.75■■□□□ 1.87
FOXN3-211ENST00000555855 HSP90AB1P08238 724 aaKnown RBP26.74■■□□□ 1.87
FOXN3-211ENST00000555855 MMP10P09238 476 aa26.74■■□□□ 1.87
FOXN3-211ENST00000555855 NLGN1Q8N2Q7 840 aa26.74■■□□□ 1.87
FOXN3-211ENST00000555855 RBM42Q9BTD8 480 aaKnown RBP26.74■■□□□ 1.87
FOXN3-211ENST00000555855 ERVV-2B6SEH9 535 aa26.73■■□□□ 1.87
FOXN3-211ENST00000555855 PLEKHO1Q53GL0 409 aaPredicted RBP26.72■■□□□ 1.87
FOXN3-211ENST00000555855 ADCY9O60503 1353 aa26.71■■□□□ 1.87
FOXN3-211ENST00000555855 ANKRD26Q9UPS8 1709 aa26.7■■□□□ 1.87
FOXN3-211ENST00000555855 TGFB2P61812 414 aa26.7■■□□□ 1.86
FOXN3-211ENST00000555855 DCAF5Q96JK2 942 aa26.7■■□□□ 1.86
FOXN3-211ENST00000555855 HSPA6P17066 643 aa26.69■■□□□ 1.86
FOXN3-211ENST00000555855 RC3H1Q5TC82 1133 aaKnown RBP26.69■■□□□ 1.86
FOXN3-211ENST00000555855 PLEKHG2Q9H7P9 1386 aa26.69■■□□□ 1.86
FOXN3-211ENST00000555855 CABP4P57796 275 aa26.68■■□□□ 1.86
FOXN3-211ENST00000555855 ADRA2BP18089 450 aa26.67■■□□□ 1.86
FOXN3-211ENST00000555855 RFC4P35249 363 aa26.67■■□□□ 1.86
FOXN3-211ENST00000555855 AMOTQ4VCS5 1084 aa26.67■■□□□ 1.86
FOXN3-211ENST00000555855 ARHGEF1Q92888 912 aaKnown RBP26.67■■□□□ 1.86
FOXN3-211ENST00000555855 IFFO2Q5TF58 517 aa26.66■■□□□ 1.86
FOXN3-211ENST00000555855 CCDC87Q9NVE4 849 aa26.66■■□□□ 1.86
FOXN3-211ENST00000555855 BCS1LQ9Y276 419 aa26.65■■□□□ 1.86
FOXN3-211ENST00000555855 A0A0G2JLW4 131 aa26.64■■□□□ 1.86
FOXN3-211ENST00000555855 RPS6KA4O75676 772 aa26.64■■□□□ 1.86
FOXN3-211ENST00000555855 ZNF530Q6P9A1 599 aaPredicted RBP26.64■■□□□ 1.86
FOXN3-211ENST00000555855 SLC4A9Q96Q91 983 aa26.64■■□□□ 1.86
FOXN3-211ENST00000555855 PARP3Q9Y6F1 533 aa26.64■■□□□ 1.86
FOXN3-211ENST00000555855 MTHFSP49914 203 aa26.63■■□□□ 1.85
FOXN3-211ENST00000555855 PANK3Q9H999 370 aa26.63■■□□□ 1.85
FOXN3-211ENST00000555855 C1orf141Q5JVX7 400 aa26.62■■□□□ 1.85
FOXN3-211ENST00000555855 ARHGAP27Q6ZUM4 889 aa26.62■■□□□ 1.85
FOXN3-211ENST00000555855 CNTNAP4Q9C0A0 1308 aa26.62■■□□□ 1.85
FOXN3-211ENST00000555855 KDRP35968 1356 aa26.61■■□□□ 1.85
FOXN3-211ENST00000555855 EIF4G2P78344 907 aaKnown RBP eCLIP26.61■■□□□ 1.85
FOXN3-211ENST00000555855 KIF3CO14782 793 aa26.6■■□□□ 1.85
FOXN3-211ENST00000555855 GYS1P13807 737 aa26.6■■□□□ 1.85
FOXN3-211ENST00000555855 CLSPNQ9HAW4 1339 aa26.6■■□□□ 1.85
FOXN3-211ENST00000555855 FCHSD2O94868 740 aa26.59■■□□□ 1.85
FOXN3-211ENST00000555855 MORC1Q86VD1 984 aa26.59■■□□□ 1.85
FOXN3-211ENST00000555855 PCGF6Q9BYE7 350 aa26.59■■□□□ 1.85
FOXN3-211ENST00000555855 PXDNLA1KZ92 1463 aa26.58■■□□□ 1.85
FOXN3-211ENST00000555855 PTCD1O75127 700 aaKnown RBP26.58■■□□□ 1.85
FOXN3-211ENST00000555855 DPEP1P16444 411 aa26.58■■□□□ 1.85
FOXN3-211ENST00000555855 NFATC2IPQ8NCF5 419 aa26.57■■□□□ 1.84
FOXN3-211ENST00000555855 CICQ96RK0 1608 aaPredicted RBP26.56■■□□□ 1.84
FOXN3-211ENST00000555855 CEP350Q5VT06 3117 aa26.55■■□□□ 1.84
FOXN3-211ENST00000555855 ZNF831Q5JPB2 1677 aa26.55■■□□□ 1.84
FOXN3-211ENST00000555855 KIF13BQ9NQT8 1826 aa26.55■■□□□ 1.84
FOXN3-211ENST00000555855 N4BP2Q86UW6 1770 aaPredicted RBP26.54■■□□□ 1.84
FOXN3-211ENST00000555855 HSPA5P11021 654 aaKnown RBP26.54■■□□□ 1.84
FOXN3-211ENST00000555855 C10orf71Q711Q0 1435 aa26.54■■□□□ 1.84
FOXN3-211ENST00000555855 TOMM70O94826 608 aa26.53■■□□□ 1.84
FOXN3-211ENST00000555855 CRKLP46109 303 aaKnown RBP26.53■■□□□ 1.84
FOXN3-211ENST00000555855 SULT6B1Q6IMI4 303 aa26.53■■□□□ 1.84
FOXN3-211ENST00000555855 AEBP1Q8IUX7 1158 aa26.53■■□□□ 1.84
FOXN3-211ENST00000555855 KDM6AO15550 1401 aaPredicted RBP26.52■■□□□ 1.84
FOXN3-211ENST00000555855 PIM2Q9P1W9 311 aa26.52■■□□□ 1.84
FOXN3-211ENST00000555855 APLP1P51693 650 aa26.51■■□□□ 1.83
FOXN3-211ENST00000555855 KNSTRNQ9Y448 316 aa26.51■■□□□ 1.83
FOXN3-211ENST00000555855 MYH14Q7Z406 1995 aaKnown RBP26.49■■□□□ 1.83
FOXN3-211ENST00000555855 C4AP0C0L4 1744 aa26.49■■□□□ 1.83
FOXN3-211ENST00000555855 SRP68Q9UHB9 627 aaKnown RBP26.49■■□□□ 1.83
FOXN3-211ENST00000555855 COL5A3P25940 1745 aaPredicted RBP26.48■■□□□ 1.83
FOXN3-211ENST00000555855 KCNA3P22001 575 aa26.48■■□□□ 1.83
FOXN3-211ENST00000555855 DALRD3Q5D0E6 543 aaKnown RBP26.48■■□□□ 1.83
FOXN3-211ENST00000555855 FKBP8Q14318 412 aa26.47■■□□□ 1.83
FOXN3-211ENST00000555855 C9orf131Q5VYM1 1079 aa26.47■■□□□ 1.83
FOXN3-211ENST00000555855 USP42Q9H9J4 1324 aaKnown RBP26.46■■□□□ 1.83
FOXN3-211ENST00000555855 KIAA1551Q9HCM1 1747 aa26.46■■□□□ 1.83
FOXN3-211ENST00000555855 ZPR1O75312 459 aa26.46■■□□□ 1.83
FOXN3-211ENST00000555855 C16orf71Q8IYS4 520 aaPredicted RBP26.46■■□□□ 1.83
FOXN3-211ENST00000555855 IL13P35225 146 aa26.45■■□□□ 1.82
FOXN3-211ENST00000555855 AKAP4Q5JQC9 854 aa26.45■■□□□ 1.82
FOXN3-211ENST00000555855 NMRK2Q9NPI5 230 aa26.45■■□□□ 1.82
FOXN3-211ENST00000555855 INTS5Q6P9B9 1019 aaKnown RBP26.43■■□□□ 1.82
FOXN3-211ENST00000555855 DDR1Q08345 913 aa26.42■■□□□ 1.82
FOXN3-211ENST00000555855 TM4SF1P30408 202 aa26.41■■□□□ 1.82
FOXN3-211ENST00000555855 DNAJC10Q8IXB1 793 aa26.41■■□□□ 1.82
FOXN3-211ENST00000555855 SLC52A2Q9HAB3 445 aa26.41■■□□□ 1.82
FOXN3-211ENST00000555855 RBM46Q8TBY0 533 aaKnown RBP26.4■■□□□ 1.82
FOXN3-211ENST00000555855 KDM2BQ8NHM5 1336 aa26.39■■□□□ 1.82
FOXN3-211ENST00000555855 CHRNA5P30532 468 aa26.39■■□□□ 1.82
FOXN3-211ENST00000555855 USPL1Q5W0Q7 1092 aa26.39■■□□□ 1.82
FOXN3-211ENST00000555855 LGR6Q9HBX8 967 aa26.39■■□□□ 1.82
FOXN3-211ENST00000555855 RNF181Q9P0P0 153 aa26.39■■□□□ 1.82
FOXN3-211ENST00000555855 POLRMTO00411 1230 aaKnown RBP26.38■■□□□ 1.81
FOXN3-211ENST00000555855 BRCA1P38398 1863 aaKnown RBP26.38■■□□□ 1.81
FOXN3-211ENST00000555855 ARFGEF1Q9Y6D6 1849 aa26.37■■□□□ 1.81
FOXN3-211ENST00000555855 RNMTO43148 476 aaKnown RBP26.37■■□□□ 1.81
FOXN3-211ENST00000555855 DNAJC5GQ8N7S2 189 aa26.36■■□□□ 1.81
FOXN3-211ENST00000555855 CYP19A1P11511 503 aaPredicted RBP26.35■■□□□ 1.81
FOXN3-211ENST00000555855 SLC39A6Q13433 755 aa26.35■■□□□ 1.81
FOXN3-211ENST00000555855 SCN11AQ9UI33 1791 aa26.35■■□□□ 1.81
FOXN3-211ENST00000555855 HMOX1P09601 288 aa26.34■■□□□ 1.81
FOXN3-211ENST00000555855 FSTL1Q12841 308 aa26.34■■□□□ 1.81
FOXN3-211ENST00000555855 RRAGCQ9HB90 399 aa26.34■■□□□ 1.81
FOXN3-211ENST00000555855 NARFQ9UHQ1 456 aa26.34■■□□□ 1.81
FOXN3-211ENST00000555855 SOS1Q07889 1333 aaPredicted RBP26.34■■□□□ 1.81
FOXN3-211ENST00000555855 TJP1Q07157 1748 aa26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms