RNA–Protein interactions for RNA: ENST00000555632.5

GABRB3-209, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 2,109 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-209ENST00000555632 KDM3BQ7LBC6 1761 aa23.22■■□□□ 1.31
GABRB3-209ENST00000555632 FLIIQ13045 1269 aa23.21■■□□□ 1.31
GABRB3-209ENST00000555632 MEIS3Q99687 375 aa23.21■■□□□ 1.31
GABRB3-209ENST00000555632 HDGFL1Q5TGJ6 251 aa23.2■■□□□ 1.3
GABRB3-209ENST00000555632 EIF2S2P20042 333 aaKnown RBP23.2■■□□□ 1.3
GABRB3-209ENST00000555632 IPO9Q96P70 1041 aaKnown RBP23.19■■□□□ 1.3
GABRB3-209ENST00000555632 NUCB1Q02818 461 aa23.18■■□□□ 1.3
GABRB3-209ENST00000555632 FKBP5Q13451 457 aaPredicted RBP23.18■■□□□ 1.3
GABRB3-209ENST00000555632 LNPKQ9C0E8 428 aa23.18■■□□□ 1.3
GABRB3-209ENST00000555632 PHAXQ9H814 394 aaKnown RBP23.18■■□□□ 1.3
GABRB3-209ENST00000555632 SEC24BO95487 1268 aa23.18■■□□□ 1.3
GABRB3-209ENST00000555632 PRDM11Q9NQV5 511 aa23.18■■□□□ 1.3
GABRB3-209ENST00000555632 TATP17735 454 aaPredicted RBP23.17■■□□□ 1.3
GABRB3-209ENST00000555632 ATP10DQ9P241 1426 aa23.16■■□□□ 1.3
GABRB3-209ENST00000555632 SOS1Q07889 1333 aaPredicted RBP23.16■■□□□ 1.3
GABRB3-209ENST00000555632 KDM6AO15550 1401 aaPredicted RBP23.15■■□□□ 1.3
GABRB3-209ENST00000555632 PRAMEF22A3QJZ6 481 aa23.15■■□□□ 1.3
GABRB3-209ENST00000555632 PHKG2P15735 406 aa23.15■■□□□ 1.3
GABRB3-209ENST00000555632 CHD1LQ86WJ1 897 aa23.15■■□□□ 1.3
GABRB3-209ENST00000555632 ABCC6O95255 1503 aa23.15■■□□□ 1.3
GABRB3-209ENST00000555632 CHPF2Q9P2E5 772 aa23.14■■□□□ 1.3
GABRB3-209ENST00000555632 ADAMTS7Q9UKP4 1686 aa23.14■■□□□ 1.3
GABRB3-209ENST00000555632 OVOS2A0A0G2JMS6 1433 aa23.14■■□□□ 1.29
GABRB3-209ENST00000555632 ANXA1P04083 346 aa23.14■■□□□ 1.29
GABRB3-209ENST00000555632 ANKRD45Q5TZF3 282 aa23.14■■□□□ 1.29
GABRB3-209ENST00000555632 CACNA1FO60840 1977 aa23.13■■□□□ 1.29
GABRB3-209ENST00000555632 SIPA1L3O60292 1781 aaPredicted RBP23.13■■□□□ 1.29
GABRB3-209ENST00000555632 CYP27B1O15528 508 aa23.13■■□□□ 1.29
GABRB3-209ENST00000555632 GCC1Q96CN9 775 aa23.13■■□□□ 1.29
GABRB3-209ENST00000555632 CCT4P50991 539 aaKnown RBP23.12■■□□□ 1.29
GABRB3-209ENST00000555632 CEP85Q6P2H3 762 aa23.12■■□□□ 1.29
GABRB3-209ENST00000555632 SPG7Q9UQ90 795 aa23.12■■□□□ 1.29
GABRB3-209ENST00000555632 NHSL1Q5SYE7 1610 aa23.11■■□□□ 1.29
GABRB3-209ENST00000555632 SLC39A6Q13433 755 aa23.11■■□□□ 1.29
GABRB3-209ENST00000555632 ANKRD44Q8N8A2 993 aa23.11■■□□□ 1.29
GABRB3-209ENST00000555632 ABCA3Q99758 1704 aa23.11■■□□□ 1.29
GABRB3-209ENST00000555632 NFATC2IPQ8NCF5 419 aa23.11■■□□□ 1.29
GABRB3-209ENST00000555632 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.11■■□□□ 1.29
GABRB3-209ENST00000555632 WDR17Q8IZU2 1322 aa23.1■■□□□ 1.29
GABRB3-209ENST00000555632 GIGYF1O75420 1035 aaPredicted RBP23.1■■□□□ 1.29
GABRB3-209ENST00000555632 HOXB7P09629 217 aa23.1■■□□□ 1.29
GABRB3-209ENST00000555632 HEG1Q9ULI3 1381 aa23.09■■□□□ 1.29
GABRB3-209ENST00000555632 IFNL2Q8IZJ0 200 aa23.09■■□□□ 1.29
GABRB3-209ENST00000555632 SCN11AQ9UI33 1791 aa23.09■■□□□ 1.29
GABRB3-209ENST00000555632 COL5A2P05997 1499 aaPredicted RBP23.09■■□□□ 1.29
GABRB3-209ENST00000555632 TOM1L2Q6ZVM7 507 aa23.09■■□□□ 1.29
GABRB3-209ENST00000555632 SLC52A2Q9HAB3 445 aa23.09■■□□□ 1.29
GABRB3-209ENST00000555632 NOP58Q9Y2X3 529 aaKnown RBP23.09■■□□□ 1.29
GABRB3-209ENST00000555632 DCTPP1Q9H773 170 aa23.08■■□□□ 1.28
GABRB3-209ENST00000555632 PROSER3Q2NL68 480 aa23.07■■□□□ 1.28
GABRB3-209ENST00000555632 RPAP2Q8IXW5 612 aaPredicted RBP23.07■■□□□ 1.28
GABRB3-209ENST00000555632 STRN4Q9NRL3 753 aa23.06■■□□□ 1.28
GABRB3-209ENST00000555632 ZNF790Q6PG37 636 aa23.06■■□□□ 1.28
GABRB3-209ENST00000555632 BCL11AQ9H165 835 aa23.06■■□□□ 1.28
GABRB3-209ENST00000555632 PKD1L3Q7Z443 1732 aa23.06■■□□□ 1.28
GABRB3-209ENST00000555632 LARP1Q6PKG0 1096 aaKnown RBP23.05■■□□□ 1.28
GABRB3-209ENST00000555632 ZBTB47Q9UFB7 747 aaPredicted RBP23.05■■□□□ 1.28
GABRB3-209ENST00000555632 PI4KAP2A4QPH2 592 aa23.03■■□□□ 1.28
GABRB3-209ENST00000555632 PI4KAP1Q8N8J0 262 aa23.03■■□□□ 1.28
GABRB3-209ENST00000555632 DCAF5Q96JK2 942 aa23.03■■□□□ 1.28
GABRB3-209ENST00000555632 USP44Q9H0E7 712 aa23.03■■□□□ 1.28
GABRB3-209ENST00000555632 DBF4Q9UBU7 674 aaPredicted RBP23.02■■□□□ 1.28
GABRB3-209ENST00000555632 APBB1O00213 710 aa23.02■■□□□ 1.28
GABRB3-209ENST00000555632 GNAI2P04899 355 aa23.02■■□□□ 1.28
GABRB3-209ENST00000555632 C16orf71Q8IYS4 520 aaPredicted RBP23.02■■□□□ 1.28
GABRB3-209ENST00000555632 ERICH6Q7L0X2 663 aa23.01■■□□□ 1.27
GABRB3-209ENST00000555632 PXDNLA1KZ92 1463 aa23.01■■□□□ 1.27
GABRB3-209ENST00000555632 ADCY9O60503 1353 aa23.01■■□□□ 1.27
GABRB3-209ENST00000555632 ZNF496Q96IT1 587 aaPredicted RBP23■■□□□ 1.27
GABRB3-209ENST00000555632 ROBO1Q9Y6N7 1651 aa23■■□□□ 1.27
GABRB3-209ENST00000555632 N4BP2Q86UW6 1770 aaPredicted RBP23■■□□□ 1.27
GABRB3-209ENST00000555632 PNMA6EA0A0J9YXQ4 647 aa22.99■■□□□ 1.27
GABRB3-209ENST00000555632 SMARCA5O60264 1052 aaPredicted RBP22.99■■□□□ 1.27
GABRB3-209ENST00000555632 ANP32EQ9BTT0 268 aa22.99■■□□□ 1.27
GABRB3-209ENST00000555632 CARD10Q9BWT7 1032 aa22.99■■□□□ 1.27
GABRB3-209ENST00000555632 USP35Q9P2H5 1018 aa22.99■■□□□ 1.27
GABRB3-209ENST00000555632 EVA1CP58658 441 aa22.99■■□□□ 1.27
GABRB3-209ENST00000555632 PDIA6Q15084 440 aa22.99■■□□□ 1.27
GABRB3-209ENST00000555632 ZCRB1Q8TBF4 217 aaKnown RBP22.99■■□□□ 1.27
GABRB3-209ENST00000555632 DNAAF4Q8WXU2 420 aa22.99■■□□□ 1.27
GABRB3-209ENST00000555632 LRRFIP2Q9Y608 721 aaKnown RBP22.99■■□□□ 1.27
GABRB3-209ENST00000555632 PLEKHG2Q9H7P9 1386 aa22.98■■□□□ 1.27
GABRB3-209ENST00000555632 C5P01031 1676 aa22.98■■□□□ 1.27
GABRB3-209ENST00000555632 MRC1P22897 1456 aa22.98■■□□□ 1.27
GABRB3-209ENST00000555632 GNAI3P08754 354 aa22.98■■□□□ 1.27
GABRB3-209ENST00000555632 BEND3Q5T5X7 828 aa22.98■■□□□ 1.27
GABRB3-209ENST00000555632 OTUD7AQ8TE49 926 aaPredicted RBP22.98■■□□□ 1.27
GABRB3-209ENST00000555632 SLC4A3P48751 1232 aa22.97■■□□□ 1.27
GABRB3-209ENST00000555632 SRCIN1Q9C0H9 1055 aa22.97■■□□□ 1.27
GABRB3-209ENST00000555632 PARP4Q9UKK3 1724 aaKnown RBP22.96■■□□□ 1.27
GABRB3-209ENST00000555632 IL2RBP14784 551 aa22.96■■□□□ 1.27
GABRB3-209ENST00000555632 CABP4P57796 275 aa22.96■■□□□ 1.27
GABRB3-209ENST00000555632 CHMP4AQ9BY43 222 aa22.96■■□□□ 1.27
GABRB3-209ENST00000555632 BTG4Q9NY30 223 aa22.96■■□□□ 1.27
GABRB3-209ENST00000555632 LTBP4Q8N2S1 1624 aa22.96■■□□□ 1.27
GABRB3-209ENST00000555632 NBPF7P0C2Y1 421 aaPredicted RBP22.96■■□□□ 1.27
GABRB3-209ENST00000555632 PLEKHM2Q8IWE5 1019 aa22.96■■□□□ 1.27
GABRB3-209ENST00000555632 HSP90AB1P08238 724 aaKnown RBP22.95■■□□□ 1.26
GABRB3-209ENST00000555632 PCDH11XQ9BZA7 1347 aa22.95■■□□□ 1.26
GABRB3-209ENST00000555632 PCDH11YQ9BZA8 1340 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms