RNA–Protein interactions for RNA: ENST00000555592.1

NPC2-206, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 5

Gene NPC2, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-206ENST00000555592 IFNL2Q8IZJ0 200 aa25.05■■□□□ 1.6
NPC2-206ENST00000555592 PHKG2P15735 406 aa25.04■■□□□ 1.6
NPC2-206ENST00000555592 MMP10P09238 476 aa25.03■■□□□ 1.6
NPC2-206ENST00000555592 ATG3Q9NT62 314 aa25.02■■□□□ 1.6
NPC2-206ENST00000555592 COL5A3P25940 1745 aaPredicted RBP25.02■■□□□ 1.6
NPC2-206ENST00000555592 PXDNLA1KZ92 1463 aa25.02■■□□□ 1.6
NPC2-206ENST00000555592 POLKQ9UBT6 870 aa25.01■■□□□ 1.59
NPC2-206ENST00000555592 ZNF831Q5JPB2 1677 aa25.01■■□□□ 1.59
NPC2-206ENST00000555592 KIF3CO14782 793 aa24.99■■□□□ 1.59
NPC2-206ENST00000555592 KDRP35968 1356 aa24.99■■□□□ 1.59
NPC2-206ENST00000555592 BRCA1P38398 1863 aaKnown RBP24.99■■□□□ 1.59
NPC2-206ENST00000555592 MYH14Q7Z406 1995 aaKnown RBP24.98■■□□□ 1.59
NPC2-206ENST00000555592 C4AP0C0L4 1744 aa24.98■■□□□ 1.59
NPC2-206ENST00000555592 EIF4A2Q14240 407 aaKnown RBP24.97■■□□□ 1.59
NPC2-206ENST00000555592 TRAPPC3LQ5T215 181 aa24.97■■□□□ 1.59
NPC2-206ENST00000555592 RTCBQ9Y3I0 505 aaKnown RBP24.97■■□□□ 1.59
NPC2-206ENST00000555592 TNNT2P45379 298 aaPredicted RBP24.96■■□□□ 1.59
NPC2-206ENST00000555592 RBM42Q9BTD8 480 aaKnown RBP24.96■■□□□ 1.59
NPC2-206ENST00000555592 C10orf71Q711Q0 1435 aa24.95■■□□□ 1.59
NPC2-206ENST00000555592 SLC4A9Q96Q91 983 aa24.95■■□□□ 1.58
NPC2-206ENST00000555592 BCS1LQ9Y276 419 aa24.95■■□□□ 1.58
NPC2-206ENST00000555592 A0A0G2JLW4 131 aa24.94■■□□□ 1.58
NPC2-206ENST00000555592 TGFB2P61812 414 aa24.94■■□□□ 1.58
NPC2-206ENST00000555592 NLGN1Q8N2Q7 840 aa24.94■■□□□ 1.58
NPC2-206ENST00000555592 ARFGEF1Q9Y6D6 1849 aa24.93■■□□□ 1.58
NPC2-206ENST00000555592 POLR3GLQ9BT43 218 aa24.93■■□□□ 1.58
NPC2-206ENST00000555592 ERVV-2B6SEH9 535 aa24.92■■□□□ 1.58
NPC2-206ENST00000555592 ARHGEF1Q92888 912 aaKnown RBP24.92■■□□□ 1.58
NPC2-206ENST00000555592 PLEKHG2Q9H7P9 1386 aa24.92■■□□□ 1.58
NPC2-206ENST00000555592 ADRA2BP18089 450 aa24.9■■□□□ 1.58
NPC2-206ENST00000555592 RC3H1Q5TC82 1133 aaKnown RBP24.9■■□□□ 1.58
NPC2-206ENST00000555592 ARHGAP27Q6ZUM4 889 aa24.9■■□□□ 1.58
NPC2-206ENST00000555592 DCAF5Q96JK2 942 aa24.9■■□□□ 1.58
NPC2-206ENST00000555592 CCDC87Q9NVE4 849 aa24.9■■□□□ 1.58
NPC2-206ENST00000555592 CNTNAP4Q9C0A0 1308 aa24.89■■□□□ 1.58
NPC2-206ENST00000555592 HSP90AB1P08238 724 aaKnown RBP24.89■■□□□ 1.58
NPC2-206ENST00000555592 GYS1P13807 737 aa24.89■■□□□ 1.58
NPC2-206ENST00000555592 DPEP1P16444 411 aa24.89■■□□□ 1.58
NPC2-206ENST00000555592 RFC4P35249 363 aa24.89■■□□□ 1.58
NPC2-206ENST00000555592 KDM6AO15550 1401 aaPredicted RBP24.88■■□□□ 1.57
NPC2-206ENST00000555592 RPS6KA4O75676 772 aa24.88■■□□□ 1.57
NPC2-206ENST00000555592 PARP3Q9Y6F1 533 aa24.88■■□□□ 1.57
NPC2-206ENST00000555592 FCHSD2O94868 740 aa24.87■■□□□ 1.57
NPC2-206ENST00000555592 APLP1P51693 650 aa24.87■■□□□ 1.57
NPC2-206ENST00000555592 CABP4P57796 275 aa24.87■■□□□ 1.57
NPC2-206ENST00000555592 PLEKHO1Q53GL0 409 aaPredicted RBP24.87■■□□□ 1.57
NPC2-206ENST00000555592 ZNF530Q6P9A1 599 aaPredicted RBP24.87■■□□□ 1.57
NPC2-206ENST00000555592 TOMM70O94826 608 aa24.85■■□□□ 1.57
NPC2-206ENST00000555592 NMRK2Q9NPI5 230 aa24.85■■□□□ 1.57
NPC2-206ENST00000555592 TJP1Q07157 1748 aa24.85■■□□□ 1.57
NPC2-206ENST00000555592 WDR90Q96KV7 1748 aa24.83■■□□□ 1.57
NPC2-206ENST00000555592 SCN11AQ9UI33 1791 aa24.83■■□□□ 1.57
NPC2-206ENST00000555592 PTCD1O75127 700 aaKnown RBP24.83■■□□□ 1.57
NPC2-206ENST00000555592 SBF1O95248 1867 aa24.82■■□□□ 1.56
NPC2-206ENST00000555592 AMOTQ4VCS5 1084 aa24.82■■□□□ 1.56
NPC2-206ENST00000555592 VIRMAQ69YN4 1812 aaKnown RBP24.82■■□□□ 1.56
NPC2-206ENST00000555592 MTHFSP49914 203 aa24.81■■□□□ 1.56
NPC2-206ENST00000555592 KCNA3P22001 575 aa24.8■■□□□ 1.56
NPC2-206ENST00000555592 CRKLP46109 303 aaKnown RBP24.8■■□□□ 1.56
NPC2-206ENST00000555592 C1orf141Q5JVX7 400 aa24.8■■□□□ 1.56
NPC2-206ENST00000555592 C9orf131Q5VYM1 1079 aa24.8■■□□□ 1.56
NPC2-206ENST00000555592 AEBP1Q8IUX7 1158 aa24.8■■□□□ 1.56
NPC2-206ENST00000555592 SRP68Q9UHB9 627 aaKnown RBP24.8■■□□□ 1.56
NPC2-206ENST00000555592 TRIM26Q12899 539 aaPredicted RBP24.78■■□□□ 1.56
NPC2-206ENST00000555592 NFATC2IPQ8NCF5 419 aa24.78■■□□□ 1.56
NPC2-206ENST00000555592 PIM2Q9P1W9 311 aa24.78■■□□□ 1.56
NPC2-206ENST00000555592 TIMELESSQ9UNS1 1208 aa24.78■■□□□ 1.56
NPC2-206ENST00000555592 FKBP8Q14318 412 aa24.77■■□□□ 1.56
NPC2-206ENST00000555592 DNAJC5GQ8N7S2 189 aa24.77■■□□□ 1.56
NPC2-206ENST00000555592 PANK3Q9H999 370 aa24.77■■□□□ 1.56
NPC2-206ENST00000555592 ADAMTS7Q9UKP4 1686 aa24.77■■□□□ 1.56
NPC2-206ENST00000555592 USP42Q9H9J4 1324 aaKnown RBP24.77■■□□□ 1.56
NPC2-206ENST00000555592 DDR1Q08345 913 aa24.76■■□□□ 1.55
NPC2-206ENST00000555592 AFDNP55196 1824 aaKnown RBP24.75■■□□□ 1.55
NPC2-206ENST00000555592 DALRD3Q5D0E6 543 aaKnown RBP24.75■■□□□ 1.55
NPC2-206ENST00000555592 C16orf71Q8IYS4 520 aaPredicted RBP24.75■■□□□ 1.55
NPC2-206ENST00000555592 RBM46Q8TBY0 533 aaKnown RBP24.75■■□□□ 1.55
NPC2-206ENST00000555592 KCPQ6ZWJ8 1503 aa24.75■■□□□ 1.55
NPC2-206ENST00000555592 TNRC6CQ9HCJ0 1690 aaKnown RBP24.74■■□□□ 1.55
NPC2-206ENST00000555592 CHRNA5P30532 468 aa24.73■■□□□ 1.55
NPC2-206ENST00000555592 SULT6B1Q6IMI4 303 aa24.73■■□□□ 1.55
NPC2-206ENST00000555592 MORC1Q86VD1 984 aa24.73■■□□□ 1.55
NPC2-206ENST00000555592 RNF181Q9P0P0 153 aa24.73■■□□□ 1.55
NPC2-206ENST00000555592 CCDC88AQ3V6T2 1871 aa24.71■■□□□ 1.55
NPC2-206ENST00000555592 INTS5Q6P9B9 1019 aaKnown RBP24.71■■□□□ 1.55
NPC2-206ENST00000555592 KDM2BQ8NHM5 1336 aa24.7■■□□□ 1.54
NPC2-206ENST00000555592 POLRMTO00411 1230 aaKnown RBP24.69■■□□□ 1.54
NPC2-206ENST00000555592 HTRA3P83110 453 aa24.69■■□□□ 1.54
NPC2-206ENST00000555592 DLEC1Q9Y238 1755 aa24.68■■□□□ 1.54
NPC2-206ENST00000555592 HSPA5P11021 654 aaKnown RBP24.68■■□□□ 1.54
NPC2-206ENST00000555592 EIF4G2P78344 907 aaKnown RBP eCLIP24.68■■□□□ 1.54
NPC2-206ENST00000555592 DNAJC10Q8IXB1 793 aa24.68■■□□□ 1.54
NPC2-206ENST00000555592 ZPR1O75312 459 aa24.67■■□□□ 1.54
NPC2-206ENST00000555592 TM4SF1P30408 202 aa24.67■■□□□ 1.54
NPC2-206ENST00000555592 USPL1Q5W0Q7 1092 aa24.67■■□□□ 1.54
NPC2-206ENST00000555592 FSTL1Q12841 308 aa24.66■■□□□ 1.54
NPC2-206ENST00000555592 RRAGCQ9HB90 399 aa24.66■■□□□ 1.54
NPC2-206ENST00000555592 NRXN2Q9P2S2 1712 aa24.66■■□□□ 1.54
NPC2-206ENST00000555592 IL13P35225 146 aa24.65■■□□□ 1.54
NPC2-206ENST00000555592 SOS1Q07889 1333 aaPredicted RBP24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms