RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 PHF24Q9UPV7 400 aa11.43□□□□□ -0.58
VRK1-205ENST00000555402 COL8A1P27658 744 aa11.42□□□□□ -0.58
VRK1-205ENST00000555402 CENPCQ03188 943 aa11.42□□□□□ -0.58
VRK1-205ENST00000555402 RRAGCQ9HB90 399 aa11.42□□□□□ -0.58
VRK1-205ENST00000555402 GPAMQ9HCL2 828 aa11.42□□□□□ -0.58
VRK1-205ENST00000555402 RAB6BQ9NRW1 208 aa11.42□□□□□ -0.58
VRK1-205ENST00000555402 PHKA2P46019 1235 aa11.41□□□□□ -0.58
VRK1-205ENST00000555402 CNKSR1Q969H4 720 aa11.41□□□□□ -0.58
VRK1-205ENST00000555402 ESYT1Q9BSJ8 1104 aa11.41□□□□□ -0.58
VRK1-205ENST00000555402 GDF2Q9UK05 429 aaPredicted RBP11.41□□□□□ -0.58
VRK1-205ENST00000555402 GNRH1P01148 92 aa11.4□□□□□ -0.58
VRK1-205ENST00000555402 NR1H3Q13133 447 aa11.4□□□□□ -0.58
VRK1-205ENST00000555402 UBAP2LQ14157 1087 aaKnown RBP11.4□□□□□ -0.58
VRK1-205ENST00000555402 A0A1B0GTH6 734 aa11.39□□□□□ -0.59
VRK1-205ENST00000555402 IL2RAP01589 272 aa11.39□□□□□ -0.59
VRK1-205ENST00000555402 FURINP09958 794 aa11.39□□□□□ -0.59
VRK1-205ENST00000555402 ZNF592Q92610 1267 aa11.39□□□□□ -0.59
VRK1-205ENST00000555402 PCMTD1Q96MG8 357 aaPredicted RBP11.39□□□□□ -0.59
VRK1-205ENST00000555402 ZSCAN10Q96SZ4 725 aaPredicted RBP11.38□□□□□ -0.59
VRK1-205ENST00000555402 GOPCQ9HD26 462 aa11.38□□□□□ -0.59
VRK1-205ENST00000555402 LBRQ14739 615 aaKnown RBP11.37□□□□□ -0.59
VRK1-205ENST00000555402 LINC00114Q6XXX2 140 aa11.37□□□□□ -0.59
VRK1-205ENST00000555402 Q8N3U1 123 aa11.37□□□□□ -0.59
VRK1-205ENST00000555402 GOLGA6L1Q8N7Z2 621 aa11.37□□□□□ -0.59
VRK1-205ENST00000555402 HRH3Q9Y5N1 445 aa11.37□□□□□ -0.59
VRK1-205ENST00000555402 ZNF330Q9Y3S2 320 aaPredicted RBP11.36□□□□□ -0.59
VRK1-205ENST00000555402 C2CD2LO14523 706 aa11.35□□□□□ -0.59
VRK1-205ENST00000555402 CSB-PGBD3P0DP91 1061 aa11.35□□□□□ -0.59
VRK1-205ENST00000555402 HOXB4P17483 251 aaPredicted RBP11.35□□□□□ -0.59
VRK1-205ENST00000555402 PGBD3Q8N328 593 aa11.35□□□□□ -0.59
VRK1-205ENST00000555402 XAGE2Q96GT9 111 aa11.35□□□□□ -0.59
VRK1-205ENST00000555402 SUV39H2Q9H5I1 410 aa11.35□□□□□ -0.59
VRK1-205ENST00000555402 GRIN2CQ14957 1233 aa11.34□□□□□ -0.59
VRK1-205ENST00000555402 RUBCNLQ9H714 662 aa11.34□□□□□ -0.59
VRK1-205ENST00000555402 ATXN7L1Q9ULK2 861 aaPredicted RBP11.34□□□□□ -0.59
VRK1-205ENST00000555402 BMP4P12644 408 aa11.33□□□□□ -0.6
VRK1-205ENST00000555402 AMPD1P23109 780 aa11.33□□□□□ -0.6
VRK1-205ENST00000555402 MSX1P28360 303 aa11.33□□□□□ -0.6
VRK1-205ENST00000555402 GNASQ5JWF2 1037 aa11.33□□□□□ -0.6
VRK1-205ENST00000555402 TMEM214Q6NUQ4 689 aaKnown RBP11.33□□□□□ -0.6
VRK1-205ENST00000555402 FHDC1Q9C0D6 1143 aaPredicted RBP11.33□□□□□ -0.6
VRK1-205ENST00000555402 GTF2E1P29083 439 aaPredicted RBP11.32□□□□□ -0.6
VRK1-205ENST00000555402 C4orf17Q53FE4 359 aa11.32□□□□□ -0.6
VRK1-205ENST00000555402 GGA1Q9UJY5 639 aa11.32□□□□□ -0.6
VRK1-205ENST00000555402 MYCP01106 439 aaPredicted RBP11.31□□□□□ -0.6
VRK1-205ENST00000555402 EFHC2Q5JST6 749 aa11.31□□□□□ -0.6
VRK1-205ENST00000555402 SLCO4C1Q6ZQN7 724 aa11.31□□□□□ -0.6
VRK1-205ENST00000555402 ABHD17AQ96GS6 310 aa11.31□□□□□ -0.6
VRK1-205ENST00000555402 CDCA7Q9BWT1 371 aaPredicted RBP11.31□□□□□ -0.6
VRK1-205ENST00000555402 KRTAP4-8Q9BYQ9 185 aa11.31□□□□□ -0.6
VRK1-205ENST00000555402 C1QTNF9BB2RNN3 333 aa11.3□□□□□ -0.6
VRK1-205ENST00000555402 FGFR3P22607 806 aa11.3□□□□□ -0.6
VRK1-205ENST00000555402 CTBSQ01459 385 aa11.3□□□□□ -0.6
VRK1-205ENST00000555402 BTBD6Q96KE9 485 aa11.3□□□□□ -0.6
VRK1-205ENST00000555402 NDFIP2Q9NV92 336 aa11.3□□□□□ -0.6
VRK1-205ENST00000555402 PIK3R2O00459 728 aa11.29□□□□□ -0.6
VRK1-205ENST00000555402 GNB5O14775 395 aa11.29□□□□□ -0.6
VRK1-205ENST00000555402 BNIP3LO60238 219 aa11.29□□□□□ -0.6
VRK1-205ENST00000555402 CCDC85AQ96PX6 553 aaPredicted RBP11.29□□□□□ -0.6
VRK1-205ENST00000555402 CEP126Q9P2H0 1117 aa11.28□□□□□ -0.6
VRK1-205ENST00000555402 GPR37L1O60883 481 aa11.27□□□□□ -0.61
VRK1-205ENST00000555402 EPXP11678 715 aa11.27□□□□□ -0.61
VRK1-205ENST00000555402 CD163Q86VB7 1156 aa11.27□□□□□ -0.61
VRK1-205ENST00000555402 ESCO1Q5FWF5 840 aa11.26□□□□□ -0.61
VRK1-205ENST00000555402 RHBDD1Q8TEB9 315 aa11.25□□□□□ -0.61
VRK1-205ENST00000555402 CRISPLD1Q9H336 500 aa11.25□□□□□ -0.61
VRK1-205ENST00000555402 ARAFP10398 606 aa11.24□□□□□ -0.61
VRK1-205ENST00000555402 PPARGC1BQ86YN6 1023 aaKnown RBP11.24□□□□□ -0.61
VRK1-205ENST00000555402 NDUFB9Q9Y6M9 179 aa11.24□□□□□ -0.61
VRK1-205ENST00000555402 DGKGP49619 791 aa11.23□□□□□ -0.61
VRK1-205ENST00000555402 RNF135Q8IUD6 432 aa11.23□□□□□ -0.61
VRK1-205ENST00000555402 NEURL1BA8MQ27 555 aa11.22□□□□□ -0.61
VRK1-205ENST00000555402 CHRNA4P43681 627 aa11.22□□□□□ -0.61
VRK1-205ENST00000555402 BANK1Q8NDB2 785 aa11.22□□□□□ -0.61
VRK1-205ENST00000555402 ETNK1Q9HBU6 452 aa11.22□□□□□ -0.61
VRK1-205ENST00000555402 NOP53Q9NZM5 478 aaKnown RBP11.22□□□□□ -0.61
VRK1-205ENST00000555402 SOCS7O14512 581 aa11.21□□□□□ -0.61
VRK1-205ENST00000555402 STAU1O95793 577 aaKnown RBP11.21□□□□□ -0.61
VRK1-205ENST00000555402 TSGA10IPQ3SY00 556 aa11.21□□□□□ -0.61
VRK1-205ENST00000555402 FIGNL1Q6PIW4 674 aa11.21□□□□□ -0.61
VRK1-205ENST00000555402 ZCCHC2Q9C0B9 1178 aaKnown RBP11.21□□□□□ -0.61
VRK1-205ENST00000555402 DNAAF2Q9NVR5 837 aaKnown RBP11.21□□□□□ -0.61
VRK1-205ENST00000555402 MTMR14Q8NCE2 650 aa11.2□□□□□ -0.62
VRK1-205ENST00000555402 IL27Q8NEV9 243 aa11.2□□□□□ -0.62
VRK1-205ENST00000555402 PSMG3-AS1Q96PY0 264 aa11.2□□□□□ -0.62
VRK1-205ENST00000555402 PCDHGC4Q9Y5F7 938 aa11.2□□□□□ -0.62
VRK1-205ENST00000555402 ITGB7P26010 798 aa11.19□□□□□ -0.62
VRK1-205ENST00000555402 USP4Q13107 963 aa11.19□□□□□ -0.62
VRK1-205ENST00000555402 TLR1Q15399 786 aa11.19□□□□□ -0.62
VRK1-205ENST00000555402 TBC1D9Q6ZT07 1266 aa11.18□□□□□ -0.62
VRK1-205ENST00000555402 CHSY3Q70JA7 882 aa11.18□□□□□ -0.62
VRK1-205ENST00000555402 PLA2G4AP47712 749 aa11.17□□□□□ -0.62
VRK1-205ENST00000555402 DOC2BQ14184 412 aa11.17□□□□□ -0.62
VRK1-205ENST00000555402 NLRP8Q86W28 1048 aa11.17□□□□□ -0.62
VRK1-205ENST00000555402 SEMA6BQ9H3T3 888 aa11.17□□□□□ -0.62
VRK1-205ENST00000555402 PHTF2Q8N3S3 785 aa11.16□□□□□ -0.62
VRK1-205ENST00000555402 C1orf216Q8TAB5 229 aa11.16□□□□□ -0.62
VRK1-205ENST00000555402 KLF15Q9UIH9 416 aa11.16□□□□□ -0.62
VRK1-205ENST00000555402 DOLKQ9UPQ8 538 aa11.16□□□□□ -0.62
VRK1-205ENST00000555402 ATXN7O15265 892 aaPredicted RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms