RNA–Protein interactions for RNA: ENST00000555241.5

SYNE2-218, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-218ENST00000555241 COL23A1Q86Y22 540 aaPredicted RBP28.99■■■□□ 2.23
SYNE2-218ENST00000555241 FLAD1Q8NFF5 587 aa28.99■■■□□ 2.23
SYNE2-218ENST00000555241 CFAP53Q96M91 514 aa28.99■■■□□ 2.23
SYNE2-218ENST00000555241 U2SURPO15042 1029 aaKnown RBP28.98■■■□□ 2.23
SYNE2-218ENST00000555241 ATP6V1AP38606 617 aa28.98■■■□□ 2.23
SYNE2-218ENST00000555241 AK7Q96M32 723 aa28.98■■■□□ 2.23
SYNE2-218ENST00000555241 ARXQ96QS3 562 aa28.98■■■□□ 2.23
SYNE2-218ENST00000555241 PPP2R1AP30153 589 aa28.97■■■□□ 2.23
SYNE2-218ENST00000555241 MSH5O43196 834 aa28.96■■■□□ 2.23
SYNE2-218ENST00000555241 POLD1P28340 1107 aa28.96■■■□□ 2.23
SYNE2-218ENST00000555241 LINC00116Q8NCU8 138 aa28.96■■■□□ 2.23
SYNE2-218ENST00000555241 ITPK1Q13572 414 aa28.95■■■□□ 2.22
SYNE2-218ENST00000555241 MTHFSDQ2M296 383 aaKnown RBP28.95■■■□□ 2.22
SYNE2-218ENST00000555241 FHDC1Q9C0D6 1143 aaPredicted RBP28.95■■■□□ 2.22
SYNE2-218ENST00000555241 MRC1P22897 1456 aa28.95■■■□□ 2.22
SYNE2-218ENST00000555241 NFATC2IPQ8NCF5 419 aa28.94■■■□□ 2.22
SYNE2-218ENST00000555241 CICQ96RK0 1608 aaPredicted RBP28.94■■■□□ 2.22
SYNE2-218ENST00000555241 MAP3K5Q99683 1374 aa28.93■■■□□ 2.22
SYNE2-218ENST00000555241 SYT17Q9BSW7 474 aa28.93■■■□□ 2.22
SYNE2-218ENST00000555241 RBM42Q9BTD8 480 aaKnown RBP28.92■■■□□ 2.22
SYNE2-218ENST00000555241 SLC4A9Q96Q91 983 aa28.91■■■□□ 2.22
SYNE2-218ENST00000555241 MYH14Q7Z406 1995 aaKnown RBP28.9■■■□□ 2.22
SYNE2-218ENST00000555241 SSFA2P28290 1259 aa28.9■■■□□ 2.22
SYNE2-218ENST00000555241 NUDCQ9Y266 331 aa28.9■■■□□ 2.22
SYNE2-218ENST00000555241 TJP1Q07157 1748 aa28.89■■■□□ 2.22
SYNE2-218ENST00000555241 DCAF8L1A6NGE4 600 aa28.89■■■□□ 2.22
SYNE2-218ENST00000555241 RNMTO43148 476 aaKnown RBP28.89■■■□□ 2.22
SYNE2-218ENST00000555241 AMIGO3Q86WK7 504 aa28.89■■■□□ 2.22
SYNE2-218ENST00000555241 SLC52A2Q9HAB3 445 aa28.89■■■□□ 2.22
SYNE2-218ENST00000555241 LGR6Q9HBX8 967 aa28.89■■■□□ 2.22
SYNE2-218ENST00000555241 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.88■■■□□ 2.21
SYNE2-218ENST00000555241 GNPATO15228 680 aa28.87■■■□□ 2.21
SYNE2-218ENST00000555241 PHF14O94880 888 aa28.87■■■□□ 2.21
SYNE2-218ENST00000555241 GAS2L2Q8NHY3 880 aa28.87■■■□□ 2.21
SYNE2-218ENST00000555241 SIPA1L3O60292 1781 aaPredicted RBP28.85■■■□□ 2.21
SYNE2-218ENST00000555241 RSPH6AQ9H0K4 717 aa28.85■■■□□ 2.21
SYNE2-218ENST00000555241 UBR2Q8IWV8 1755 aa28.85■■■□□ 2.21
SYNE2-218ENST00000555241 PTCD1O75127 700 aaKnown RBP28.84■■■□□ 2.21
SYNE2-218ENST00000555241 RC3H1Q5TC82 1133 aaKnown RBP28.84■■■□□ 2.21
SYNE2-218ENST00000555241 MSL1Q68DK7 614 aa28.84■■■□□ 2.21
SYNE2-218ENST00000555241 CNTNAP4Q9C0A0 1308 aa28.84■■■□□ 2.21
SYNE2-218ENST00000555241 PRKAR2BP31323 418 aa28.83■■■□□ 2.21
SYNE2-218ENST00000555241 SMIM5Q71RC9 77 aa28.82■■■□□ 2.2
SYNE2-218ENST00000555241 C4AP0C0L4 1744 aa28.81■■■□□ 2.2
SYNE2-218ENST00000555241 GNAT3A8MTJ3 354 aa28.81■■■□□ 2.2
SYNE2-218ENST00000555241 U2AF1L5P0DN76 240 aaPredicted RBP28.81■■■□□ 2.2
SYNE2-218ENST00000555241 U2AF1Q01081 240 aaKnown RBP eCLIP28.81■■■□□ 2.2
SYNE2-218ENST00000555241 RTCBQ9Y3I0 505 aaKnown RBP28.81■■■□□ 2.2
SYNE2-218ENST00000555241 KLHL34Q8N239 644 aa28.8■■■□□ 2.2
SYNE2-218ENST00000555241 KCPQ6ZWJ8 1503 aa28.79■■■□□ 2.2
SYNE2-218ENST00000555241 FCHSD2O94868 740 aa28.79■■■□□ 2.2
SYNE2-218ENST00000555241 PHACTR3Q96KR7 559 aa28.79■■■□□ 2.2
SYNE2-218ENST00000555241 CHD4Q14839 1912 aa28.77■■■□□ 2.2
SYNE2-218ENST00000555241 ADRA2BP18089 450 aa28.77■■■□□ 2.2
SYNE2-218ENST00000555241 TRAPPC3LQ5T215 181 aa28.77■■■□□ 2.2
SYNE2-218ENST00000555241 RPS6KA4O75676 772 aa28.76■■■□□ 2.19
SYNE2-218ENST00000555241 SLC39A6Q13433 755 aa28.76■■■□□ 2.19
SYNE2-218ENST00000555241 UTRNP46939 3433 aa28.75■■■□□ 2.19
SYNE2-218ENST00000555241 DDX10Q13206 875 aaKnown RBP28.75■■■□□ 2.19
SYNE2-218ENST00000555241 IL17REQ8NFR9 667 aa28.75■■■□□ 2.19
SYNE2-218ENST00000555241 CRKLP46109 303 aaKnown RBP28.74■■■□□ 2.19
SYNE2-218ENST00000555241 TEFQ10587 303 aa28.74■■■□□ 2.19
SYNE2-218ENST00000555241 DLG5Q8TDM6 1919 aa28.74■■■□□ 2.19
SYNE2-218ENST00000555241 CEMIPQ8WUJ3 1361 aa28.74■■■□□ 2.19
SYNE2-218ENST00000555241 RALBP1Q15311 655 aa28.73■■■□□ 2.19
SYNE2-218ENST00000555241 DNAJC10Q8IXB1 793 aa28.71■■■□□ 2.19
SYNE2-218ENST00000555241 VSIG10Q8N0Z9 540 aa28.71■■■□□ 2.19
SYNE2-218ENST00000555241 ARHGEF1Q92888 912 aaKnown RBP28.71■■■□□ 2.19
SYNE2-218ENST00000555241 TTC5Q8N0Z6 440 aa28.7■■■□□ 2.18
SYNE2-218ENST00000555241 NLGN2Q8NFZ4 835 aa28.7■■■□□ 2.18
SYNE2-218ENST00000555241 CD2APQ9Y5K6 639 aa28.7■■■□□ 2.18
SYNE2-218ENST00000555241 GOLGB1Q14789 3259 aaKnown RBP28.69■■■□□ 2.18
SYNE2-218ENST00000555241 RFC4P35249 363 aa28.69■■■□□ 2.18
SYNE2-218ENST00000555241 KIF13BQ9NQT8 1826 aa28.67■■■□□ 2.18
SYNE2-218ENST00000555241 INTS5Q6P9B9 1019 aaKnown RBP28.67■■■□□ 2.18
SYNE2-218ENST00000555241 NLGN1Q8N2Q7 840 aa28.67■■■□□ 2.18
SYNE2-218ENST00000555241 ZEB1P37275 1124 aaPredicted RBP28.66■■■□□ 2.18
SYNE2-218ENST00000555241 ZNF790Q6PG37 636 aa28.66■■■□□ 2.18
SYNE2-218ENST00000555241 CCDC87Q9NVE4 849 aa28.66■■■□□ 2.18
SYNE2-218ENST00000555241 NEFMP07197 916 aa28.65■■■□□ 2.18
SYNE2-218ENST00000555241 CYP19A1P11511 503 aaPredicted RBP28.65■■■□□ 2.18
SYNE2-218ENST00000555241 YY1P25490 414 aa28.65■■■□□ 2.18
SYNE2-218ENST00000555241 RTF1Q92541 710 aaKnown RBP28.65■■■□□ 2.18
SYNE2-218ENST00000555241 GYS1P13807 737 aa28.64■■■□□ 2.18
SYNE2-218ENST00000555241 GPR162Q16538 588 aa28.64■■■□□ 2.18
SYNE2-218ENST00000555241 HTATSF1O43719 755 aaKnown RBP28.63■■■□□ 2.17
SYNE2-218ENST00000555241 MMP10P09238 476 aa28.63■■■□□ 2.17
SYNE2-218ENST00000555241 HEG1Q9ULI3 1381 aa28.62■■■□□ 2.17
SYNE2-218ENST00000555241 ZNF496Q96IT1 587 aaPredicted RBP28.62■■■□□ 2.17
SYNE2-218ENST00000555241 SOS1Q07889 1333 aaPredicted RBP28.62■■■□□ 2.17
SYNE2-218ENST00000555241 PNNQ9H307 717 aaKnown RBP28.61■■■□□ 2.17
SYNE2-218ENST00000555241 MYBBP1AQ9BQG0 1328 aaKnown RBP28.61■■■□□ 2.17
SYNE2-218ENST00000555241 USP42Q9H9J4 1324 aaKnown RBP28.61■■■□□ 2.17
SYNE2-218ENST00000555241 BTBD11A6QL63 1104 aa28.6■■■□□ 2.17
SYNE2-218ENST00000555241 MCM10Q7L590 875 aa28.6■■■□□ 2.17
SYNE2-218ENST00000555241 PLEKHF1Q96S99 279 aa28.6■■■□□ 2.17
SYNE2-218ENST00000555241 FMNL2Q96PY5 1086 aa28.59■■■□□ 2.17
SYNE2-218ENST00000555241 ZBTB1Q9Y2K1 713 aa28.59■■■□□ 2.17
SYNE2-218ENST00000555241 STARD3NLO95772 234 aa28.58■■■□□ 2.17
SYNE2-218ENST00000555241 PELP1Q8IZL8 1130 aaKnown RBP28.58■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms