RNA–Protein interactions for RNA: ENST00000555233.5

PRKCH-214, Transcript of protein kinase C eta, humanhuman

TSL 2

Gene PRKCH, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-214ENST00000555233 TNNT2P45379 298 aaPredicted RBP8.41□□□□□ -1.06
PRKCH-214ENST00000555233 ANKRD24Q8TF21 1146 aa8.41□□□□□ -1.06
PRKCH-214ENST00000555233 EYA1Q99502 592 aa8.41□□□□□ -1.06
PRKCH-214ENST00000555233 USP21Q9UK80 565 aa8.41□□□□□ -1.06
PRKCH-214ENST00000555233 TAF1LQ8IZX4 1826 aa8.4□□□□□ -1.06
PRKCH-214ENST00000555233 KDM3BQ7LBC6 1761 aa8.4□□□□□ -1.06
PRKCH-214ENST00000555233 BCL9O00512 1426 aa8.4□□□□□ -1.06
PRKCH-214ENST00000555233 MYBBP1AQ9BQG0 1328 aaKnown RBP8.4□□□□□ -1.06
PRKCH-214ENST00000555233 BARGINQ6ZT62 677 aa8.4□□□□□ -1.06
PRKCH-214ENST00000555233 AEBP1Q8IUX7 1158 aa8.4□□□□□ -1.06
PRKCH-214ENST00000555233 ARHGEF1Q92888 912 aaKnown RBP8.4□□□□□ -1.06
PRKCH-214ENST00000555233 NGLY1Q96IV0 654 aa8.4□□□□□ -1.06
PRKCH-214ENST00000555233 GJD4Q96KN9 370 aaPredicted RBP8.4□□□□□ -1.06
PRKCH-214ENST00000555233 CARD10Q9BWT7 1032 aa8.4□□□□□ -1.06
PRKCH-214ENST00000555233 TUBGCP6Q96RT7 1819 aa8.4□□□□□ -1.07
PRKCH-214ENST00000555233 KDM6AO15550 1401 aaPredicted RBP8.38□□□□□ -1.07
PRKCH-214ENST00000555233 COL5A3P25940 1745 aaPredicted RBP8.38□□□□□ -1.07
PRKCH-214ENST00000555233 NUP188Q5SRE5 1749 aa8.38□□□□□ -1.07
PRKCH-214ENST00000555233 ZNF831Q5JPB2 1677 aa8.38□□□□□ -1.07
PRKCH-214ENST00000555233 RALBP1Q15311 655 aa8.38□□□□□ -1.07
PRKCH-214ENST00000555233 TRPC5Q9UL62 973 aaPredicted RBP8.38□□□□□ -1.07
PRKCH-214ENST00000555233 TJP1Q07157 1748 aa8.37□□□□□ -1.07
PRKCH-214ENST00000555233 USHBP1Q8N6Y0 703 aa8.37□□□□□ -1.07
PRKCH-214ENST00000555233 FAM163AQ96GL9 167 aaPredicted RBP8.37□□□□□ -1.07
PRKCH-214ENST00000555233 RSPH6AQ9H0K4 717 aa8.37□□□□□ -1.07
PRKCH-214ENST00000555233 QTRT2Q9H974 415 aaKnown RBP8.37□□□□□ -1.07
PRKCH-214ENST00000555233 KAT6BQ8WYB5 2073 aa8.37□□□□□ -1.07
PRKCH-214ENST00000555233 C5P01031 1676 aa8.37□□□□□ -1.07
PRKCH-214ENST00000555233 AMPHP49418 695 aa8.36□□□□□ -1.07
PRKCH-214ENST00000555233 RBM6P78332 1123 aaKnown RBP8.36□□□□□ -1.07
PRKCH-214ENST00000555233 ZNF772Q68DY9 489 aaPredicted RBP8.36□□□□□ -1.07
PRKCH-214ENST00000555233 TCP11L2Q8N4U5 519 aa8.36□□□□□ -1.07
PRKCH-214ENST00000555233 PLEKHF1Q96S99 279 aa8.36□□□□□ -1.07
PRKCH-214ENST00000555233 STRN4Q9NRL3 753 aa8.36□□□□□ -1.07
PRKCH-214ENST00000555233 MYH14Q7Z406 1995 aaKnown RBP8.35□□□□□ -1.07
PRKCH-214ENST00000555233 CYP27B1O15528 508 aa8.35□□□□□ -1.07
PRKCH-214ENST00000555233 MEX3CQ5U5Q3 659 aaKnown RBP8.35□□□□□ -1.07
PRKCH-214ENST00000555233 THRAP3Q9Y2W1 955 aaKnown RBP8.35□□□□□ -1.07
PRKCH-214ENST00000555233 TESPA1A2RU30 521 aaPredicted RBP8.34□□□□□ -1.07
PRKCH-214ENST00000555233 PYGBP11216 843 aa8.34□□□□□ -1.07
PRKCH-214ENST00000555233 FAM98CQ17RN3 349 aaKnown RBP8.34□□□□□ -1.07
PRKCH-214ENST00000555233 PTF1AQ7RTS3 328 aa8.34□□□□□ -1.07
PRKCH-214ENST00000555233 MARCH10Q8NA82 808 aaPredicted RBP8.34□□□□□ -1.07
PRKCH-214ENST00000555233 PNISRQ8TF01 805 aaKnown RBP8.34□□□□□ -1.07
PRKCH-214ENST00000555233 LTV1Q96GA3 475 aaPredicted RBP8.34□□□□□ -1.07
PRKCH-214ENST00000555233 QSER1Q2KHR3 1735 aa8.34□□□□□ -1.07
PRKCH-214ENST00000555233 LAMB4A4D0S4 1761 aa8.33□□□□□ -1.08
PRKCH-214ENST00000555233 ZBTB7CA1YPR0 619 aa8.33□□□□□ -1.08
PRKCH-214ENST00000555233 CNGB1Q14028 1251 aaPredicted RBP8.33□□□□□ -1.08
PRKCH-214ENST00000555233 E2F4Q16254 413 aa8.33□□□□□ -1.08
PRKCH-214ENST00000555233 COL24A1Q17RW2 1714 aa8.33□□□□□ -1.08
PRKCH-214ENST00000555233 SMYD5Q6GMV2 418 aa8.33□□□□□ -1.08
PRKCH-214ENST00000555233 TOM1L2Q6ZVM7 507 aa8.33□□□□□ -1.08
PRKCH-214ENST00000555233 CDAN1Q8IWY9 1227 aa8.33□□□□□ -1.08
PRKCH-214ENST00000555233 SEPT12Q8IYM1 358 aa8.33□□□□□ -1.08
PRKCH-214ENST00000555233 ZNF579Q8NAF0 562 aaKnown RBP8.33□□□□□ -1.08
PRKCH-214ENST00000555233 PHACTR3Q96KR7 559 aa8.33□□□□□ -1.08
PRKCH-214ENST00000555233 ZMYND15Q9H091 742 aa8.33□□□□□ -1.08
PRKCH-214ENST00000555233 KCPQ6ZWJ8 1503 aa8.33□□□□□ -1.08
PRKCH-214ENST00000555233 UBR3Q6ZT12 1888 aa8.32□□□□□ -1.08
PRKCH-214ENST00000555233 SEMA3EO15041 775 aa8.32□□□□□ -1.08
PRKCH-214ENST00000555233 PPM1GO15355 546 aaPredicted RBP8.32□□□□□ -1.08
PRKCH-214ENST00000555233 DIAPH1O60610 1272 aaKnown RBP8.32□□□□□ -1.08
PRKCH-214ENST00000555233 MAMSTRQ6ZN01 415 aa8.32□□□□□ -1.08
PRKCH-214ENST00000555233 RASEFQ8IZ41 740 aa8.32□□□□□ -1.08
PRKCH-214ENST00000555233 NLRP2Q9NX02 1062 aa8.32□□□□□ -1.08
PRKCH-214ENST00000555233 CEMIPQ8WUJ3 1361 aa8.32□□□□□ -1.08
PRKCH-214ENST00000555233 ZMYND10O75800 440 aa8.31□□□□□ -1.08
PRKCH-214ENST00000555233 HMOX1P09601 288 aa8.31□□□□□ -1.08
PRKCH-214ENST00000555233 IL2RBP14784 551 aa8.31□□□□□ -1.08
PRKCH-214ENST00000555233 RXRBP28702 533 aa8.31□□□□□ -1.08
PRKCH-214ENST00000555233 SULT6B1Q6IMI4 303 aa8.31□□□□□ -1.08
PRKCH-214ENST00000555233 NPM2Q86SE8 214 aaKnown RBP8.31□□□□□ -1.08
PRKCH-214ENST00000555233 USP35Q9P2H5 1018 aa8.31□□□□□ -1.08
PRKCH-214ENST00000555233 C4AP0C0L4 1744 aa8.3□□□□□ -1.08
PRKCH-214ENST00000555233 C4BP0C0L5 1744 aa8.3□□□□□ -1.08
PRKCH-214ENST00000555233 FAM182BQ5T319 152 aa8.3□□□□□ -1.08
PRKCH-214ENST00000555233 DIEXFQ68CQ4 756 aaKnown RBP8.3□□□□□ -1.08
PRKCH-214ENST00000555233 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.3□□□□□ -1.08
PRKCH-214ENST00000555233 CASZ1Q86V15 1759 aa8.3□□□□□ -1.08
PRKCH-214ENST00000555233 PRR29P0C7W0 189 aa8.29□□□□□ -1.08
PRKCH-214ENST00000555233 MTHFSDQ2M296 383 aaKnown RBP8.29□□□□□ -1.08
PRKCH-214ENST00000555233 ADAMTS8Q9UP79 889 aa8.29□□□□□ -1.08
PRKCH-214ENST00000555233 CCER2I3L3R5 266 aa8.28□□□□□ -1.08
PRKCH-214ENST00000555233 CSB-PGBD3P0DP91 1061 aa8.28□□□□□ -1.08
PRKCH-214ENST00000555233 PHKG2P15735 406 aa8.28□□□□□ -1.08
PRKCH-214ENST00000555233 PRKAR2BP31323 418 aa8.28□□□□□ -1.08
PRKCH-214ENST00000555233 EVA1CP58658 441 aa8.28□□□□□ -1.08
PRKCH-214ENST00000555233 CDCA7Q9BWT1 371 aaPredicted RBP8.28□□□□□ -1.08
PRKCH-214ENST00000555233 FARP1Q9Y4F1 1045 aaPredicted RBP8.28□□□□□ -1.08
PRKCH-214ENST00000555233 ZNF521Q96K83 1311 aa8.28□□□□□ -1.08
PRKCH-214ENST00000555233 FCHSD2O94868 740 aa8.27□□□□□ -1.09
PRKCH-214ENST00000555233 ZNF467Q7Z7K2 595 aaPredicted RBP8.27□□□□□ -1.09
PRKCH-214ENST00000555233 ZCRB1Q8TBF4 217 aaKnown RBP8.27□□□□□ -1.09
PRKCH-214ENST00000555233 ARID3AQ99856 593 aa8.27□□□□□ -1.09
PRKCH-214ENST00000555233 CREBZFQ9NS37 354 aa8.27□□□□□ -1.09
PRKCH-214ENST00000555233 MAP3K5Q99683 1374 aa8.26□□□□□ -1.09
PRKCH-214ENST00000555233 ANP32CO43423 234 aa8.26□□□□□ -1.09
PRKCH-214ENST00000555233 KCNQ2O43526 872 aa8.26□□□□□ -1.09
PRKCH-214ENST00000555233 DDB1Q16531 1140 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms