RNA–Protein interactions for RNA: ENST00000555052.1

ARHGEF40-205, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 3

Gene ARHGEF40, Length 935 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-205ENST00000555052 ZNF831Q5JPB2 1677 aa21.51■■□□□ 1.03
ARHGEF40-205ENST00000555052 KDM6AO15550 1401 aaPredicted RBP21.51■■□□□ 1.03
ARHGEF40-205ENST00000555052 ERVV-2B6SEH9 535 aa21.5■■□□□ 1.03
ARHGEF40-205ENST00000555052 GRIN3BO60391 1043 aa21.5■■□□□ 1.03
ARHGEF40-205ENST00000555052 ATP6V1AP38606 617 aa21.5■■□□□ 1.03
ARHGEF40-205ENST00000555052 MORC1Q86VD1 984 aa21.5■■□□□ 1.03
ARHGEF40-205ENST00000555052 DCAF5Q96JK2 942 aa21.49■■□□□ 1.03
ARHGEF40-205ENST00000555052 SLC4A9Q96Q91 983 aa21.49■■□□□ 1.03
ARHGEF40-205ENST00000555052 GNPATO15228 680 aa21.48■■□□□ 1.03
ARHGEF40-205ENST00000555052 HSP90AB1P08238 724 aaKnown RBP21.48■■□□□ 1.03
ARHGEF40-205ENST00000555052 PLEKHO1Q53GL0 409 aaPredicted RBP21.48■■□□□ 1.03
ARHGEF40-205ENST00000555052 AEBP1Q8IUX7 1158 aa21.48■■□□□ 1.03
ARHGEF40-205ENST00000555052 AMOTQ4VCS5 1084 aa21.47■■□□□ 1.03
ARHGEF40-205ENST00000555052 ZNF530Q6P9A1 599 aaPredicted RBP21.47■■□□□ 1.03
ARHGEF40-205ENST00000555052 COL5A3P25940 1745 aaPredicted RBP21.46■■□□□ 1.03
ARHGEF40-205ENST00000555052 AMER1Q5JTC6 1135 aaPredicted RBP21.46■■□□□ 1.03
ARHGEF40-205ENST00000555052 KNSTRNQ9Y448 316 aa21.46■■□□□ 1.03
ARHGEF40-205ENST00000555052 IL13P35225 146 aa21.44■■□□□ 1.02
ARHGEF40-205ENST00000555052 C1QTNF8P60827 252 aa21.44■■□□□ 1.02
ARHGEF40-205ENST00000555052 MYH14Q7Z406 1995 aaKnown RBP21.43■■□□□ 1.02
ARHGEF40-205ENST00000555052 KIF7Q2M1P5 1343 aa21.43■■□□□ 1.02
ARHGEF40-205ENST00000555052 RC3H1Q5TC82 1133 aaKnown RBP21.42■■□□□ 1.02
ARHGEF40-205ENST00000555052 SULT6B1Q6IMI4 303 aa21.42■■□□□ 1.02
ARHGEF40-205ENST00000555052 CNTNAP4Q9C0A0 1308 aa21.42■■□□□ 1.02
ARHGEF40-205ENST00000555052 CABP4P57796 275 aa21.41■■□□□ 1.02
ARHGEF40-205ENST00000555052 RBM42Q9BTD8 480 aaKnown RBP21.41■■□□□ 1.02
ARHGEF40-205ENST00000555052 RTCBQ9Y3I0 505 aaKnown RBP21.41■■□□□ 1.02
ARHGEF40-205ENST00000555052 MTHFSP49914 203 aa21.4■■□□□ 1.02
ARHGEF40-205ENST00000555052 C1orf141Q5JVX7 400 aa21.4■■□□□ 1.02
ARHGEF40-205ENST00000555052 KIF13BQ9NQT8 1826 aa21.4■■□□□ 1.02
ARHGEF40-205ENST00000555052 ADCY9O60503 1353 aa21.39■■□□□ 1.02
ARHGEF40-205ENST00000555052 SCN11AQ9UI33 1791 aa21.39■■□□□ 1.01
ARHGEF40-205ENST00000555052 MMP10P09238 476 aa21.39■■□□□ 1.01
ARHGEF40-205ENST00000555052 ADRA2BP18089 450 aa21.39■■□□□ 1.01
ARHGEF40-205ENST00000555052 CICQ96RK0 1608 aaPredicted RBP21.39■■□□□ 1.01
ARHGEF40-205ENST00000555052 KIAA1551Q9HCM1 1747 aa21.38■■□□□ 1.01
ARHGEF40-205ENST00000555052 GIGYF1O75420 1035 aaPredicted RBP21.38■■□□□ 1.01
ARHGEF40-205ENST00000555052 TRAPPC3LQ5T215 181 aa21.38■■□□□ 1.01
ARHGEF40-205ENST00000555052 ATP10DQ9P241 1426 aa21.38■■□□□ 1.01
ARHGEF40-205ENST00000555052 RPS6KA4O75676 772 aa21.37■■□□□ 1.01
ARHGEF40-205ENST00000555052 ARHGEF1Q92888 912 aaKnown RBP21.37■■□□□ 1.01
ARHGEF40-205ENST00000555052 C4AP0C0L4 1744 aa21.37■■□□□ 1.01
ARHGEF40-205ENST00000555052 PER1O15534 1290 aaPredicted RBP21.36■■□□□ 1.01
ARHGEF40-205ENST00000555052 NFATC2IPQ8NCF5 419 aa21.36■■□□□ 1.01
ARHGEF40-205ENST00000555052 PXDNLA1KZ92 1463 aa21.36■■□□□ 1.01
ARHGEF40-205ENST00000555052 C10orf71Q711Q0 1435 aa21.36■■□□□ 1.01
ARHGEF40-205ENST00000555052 TJP1Q07157 1748 aa21.35■■□□□ 1.01
ARHGEF40-205ENST00000555052 GYS1P13807 737 aa21.35■■□□□ 1.01
ARHGEF40-205ENST00000555052 NLGN1Q8N2Q7 840 aa21.35■■□□□ 1.01
ARHGEF40-205ENST00000555052 MRC1P22897 1456 aa21.34■■□□□ 1.01
ARHGEF40-205ENST00000555052 SENP3-EIF4A1A0A087X0R7 540 aa21.34■■□□□ 1.01
ARHGEF40-205ENST00000555052 PTCD1O75127 700 aaKnown RBP21.34■■□□□ 1.01
ARHGEF40-205ENST00000555052 WWC3Q9ULE0 1092 aa21.34■■□□□ 1.01
ARHGEF40-205ENST00000555052 AKAP4Q5JQC9 854 aa21.33■■□□□ 1.01
ARHGEF40-205ENST00000555052 CRKLP46109 303 aaKnown RBP21.32■■□□□ 1
ARHGEF40-205ENST00000555052 ADAMTS7Q9UKP4 1686 aa21.31■■□□□ 1
ARHGEF40-205ENST00000555052 RFC4P35249 363 aa21.31■■□□□ 1
ARHGEF40-205ENST00000555052 N4BP2Q86UW6 1770 aaPredicted RBP21.31■■□□□ 1
ARHGEF40-205ENST00000555052 VIRMAQ69YN4 1812 aaKnown RBP21.3■■□□□ 1
ARHGEF40-205ENST00000555052 TGFB2P61812 414 aa21.3■■□□□ 1
ARHGEF40-205ENST00000555052 SLC52A2Q9HAB3 445 aa21.3■■□□□ 1
ARHGEF40-205ENST00000555052 COL3A1P02461 1466 aaPredicted RBP21.29■■□□□ 1
ARHGEF40-205ENST00000555052 NPC1L1Q9UHC9 1359 aa21.29■■□□□ 1
ARHGEF40-205ENST00000555052 HMOX1P09601 288 aa21.29■■□□□ 1
ARHGEF40-205ENST00000555052 LGR6Q9HBX8 967 aa21.29■■□□□ 1
ARHGEF40-205ENST00000555052 BRCA1P38398 1863 aaKnown RBP21.28■■□□□ 1
ARHGEF40-205ENST00000555052 USP42Q9H9J4 1324 aaKnown RBP21.28■■□□□ 1
ARHGEF40-205ENST00000555052 RNMTO43148 476 aaKnown RBP21.27■■□□□ 1
ARHGEF40-205ENST00000555052 CC2D1BQ5T0F9 858 aaKnown RBP21.27■■□□□ 1
ARHGEF40-205ENST00000555052 INTS5Q6P9B9 1019 aaKnown RBP21.27■■□□□ 1
ARHGEF40-205ENST00000555052 CCDC87Q9NVE4 849 aa21.27■■□□□ 1
ARHGEF40-205ENST00000555052 KCPQ6ZWJ8 1503 aa21.27■■□□□ 1
ARHGEF40-205ENST00000555052 A0A0G2JLW4 131 aa21.26■□□□□ 0.99
ARHGEF40-205ENST00000555052 DIAPH1O60610 1272 aaKnown RBP21.26■□□□□ 0.99
ARHGEF40-205ENST00000555052 GPBP1L1Q9HC44 474 aaPredicted RBP21.26■□□□□ 0.99
ARHGEF40-205ENST00000555052 SRP68Q9UHB9 627 aaKnown RBP21.26■□□□□ 0.99
ARHGEF40-205ENST00000555052 PARP3Q9Y6F1 533 aa21.26■□□□□ 0.99
ARHGEF40-205ENST00000555052 MTHFSDQ2M296 383 aaKnown RBP21.25■□□□□ 0.99
ARHGEF40-205ENST00000555052 DNAJC10Q8IXB1 793 aa21.25■□□□□ 0.99
ARHGEF40-205ENST00000555052 DPEP1P16444 411 aa21.24■□□□□ 0.99
ARHGEF40-205ENST00000555052 FKBP8Q14318 412 aa21.24■□□□□ 0.99
ARHGEF40-205ENST00000555052 DDR1Q08345 913 aa21.23■□□□□ 0.99
ARHGEF40-205ENST00000555052 SLC39A6Q13433 755 aa21.23■□□□□ 0.99
ARHGEF40-205ENST00000555052 SOS1Q07889 1333 aaPredicted RBP21.23■□□□□ 0.99
ARHGEF40-205ENST00000555052 KCNA3P22001 575 aa21.22■□□□□ 0.99
ARHGEF40-205ENST00000555052 BCS1LQ9Y276 419 aa21.22■□□□□ 0.99
ARHGEF40-205ENST00000555052 UBR2Q8IWV8 1755 aa21.22■□□□□ 0.99
ARHGEF40-205ENST00000555052 CYP19A1P11511 503 aaPredicted RBP21.21■□□□□ 0.99
ARHGEF40-205ENST00000555052 ZNF526Q8TF50 670 aaPredicted RBP21.21■□□□□ 0.99
ARHGEF40-205ENST00000555052 ARFGEF1Q9Y6D6 1849 aa21.2■□□□□ 0.98
ARHGEF40-205ENST00000555052 POLRMTO00411 1230 aaKnown RBP21.18■□□□□ 0.98
ARHGEF40-205ENST00000555052 TM4SF1P30408 202 aa21.18■□□□□ 0.98
ARHGEF40-205ENST00000555052 VSIG10Q8N0Z9 540 aa21.18■□□□□ 0.98
ARHGEF40-205ENST00000555052 FCHSD2O94868 740 aa21.17■□□□□ 0.98
ARHGEF40-205ENST00000555052 USPL1Q5W0Q7 1092 aa21.17■□□□□ 0.98
ARHGEF40-205ENST00000555052 ZBTB1Q9Y2K1 713 aa21.17■□□□□ 0.98
ARHGEF40-205ENST00000555052 COL15A1P39059 1388 aa21.17■□□□□ 0.98
ARHGEF40-205ENST00000555052 KIF3CO14782 793 aa21.16■□□□□ 0.98
ARHGEF40-205ENST00000555052 ZPR1O75312 459 aa21.16■□□□□ 0.98
ARHGEF40-205ENST00000555052 SIPA1L3O60292 1781 aaPredicted RBP21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms