RNA–Protein interactions for RNA: ENST00000554961.5

PSMA6-209, Transcript of proteasome subunit alpha 6, humanhuman

TSL 2

Gene PSMA6, Length 814 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA6-209ENST00000554961 AMIGO3Q86WK7 504 aa11.4□□□□□ -0.58
PSMA6-209ENST00000554961 C4AP0C0L4 1744 aa11.4□□□□□ -0.58
PSMA6-209ENST00000554961 USP47Q96K76 1375 aa11.4□□□□□ -0.59
PSMA6-209ENST00000554961 WDR33Q9C0J8 1336 aaKnown RBP11.39□□□□□ -0.59
PSMA6-209ENST00000554961 HMGB2P26583 209 aaKnown RBP11.39□□□□□ -0.59
PSMA6-209ENST00000554961 PRIM1P49642 420 aaKnown RBP11.39□□□□□ -0.59
PSMA6-209ENST00000554961 CFAP70Q5T0N1 1121 aa11.39□□□□□ -0.59
PSMA6-209ENST00000554961 ARHGEF25Q86VW2 580 aa11.39□□□□□ -0.59
PSMA6-209ENST00000554961 SYTL4Q96C24 671 aaPredicted RBP11.39□□□□□ -0.59
PSMA6-209ENST00000554961 PLEKHG3A1L390 1219 aa11.38□□□□□ -0.59
PSMA6-209ENST00000554961 KCNA3P22001 575 aa11.38□□□□□ -0.59
PSMA6-209ENST00000554961 DGKZQ13574 1117 aa11.38□□□□□ -0.59
PSMA6-209ENST00000554961 RGL3Q3MIN7 710 aa11.38□□□□□ -0.59
PSMA6-209ENST00000554961 BEGAINQ9BUH8 593 aa11.38□□□□□ -0.59
PSMA6-209ENST00000554961 TIMELESSQ9UNS1 1208 aa11.38□□□□□ -0.59
PSMA6-209ENST00000554961 NFAT5O94916 1531 aa11.37□□□□□ -0.59
PSMA6-209ENST00000554961 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.37□□□□□ -0.59
PSMA6-209ENST00000554961 MMP10P09238 476 aa11.37□□□□□ -0.59
PSMA6-209ENST00000554961 NBPF15Q8N660 670 aa11.37□□□□□ -0.59
PSMA6-209ENST00000554961 POTEIP0CG38 1075 aa11.36□□□□□ -0.59
PSMA6-209ENST00000554961 POTEJP0CG39 1038 aa11.36□□□□□ -0.59
PSMA6-209ENST00000554961 DEFB115Q30KQ5 88 aa11.36□□□□□ -0.59
PSMA6-209ENST00000554961 PHF14O94880 888 aa11.35□□□□□ -0.59
PSMA6-209ENST00000554961 SSFA2P28290 1259 aa11.35□□□□□ -0.59
PSMA6-209ENST00000554961 NLRP6P59044 892 aa11.35□□□□□ -0.59
PSMA6-209ENST00000554961 POLA2Q14181 598 aa11.35□□□□□ -0.59
PSMA6-209ENST00000554961 DALRD3Q5D0E6 543 aaKnown RBP11.35□□□□□ -0.59
PSMA6-209ENST00000554961 AK7Q96M32 723 aa11.35□□□□□ -0.59
PSMA6-209ENST00000554961 PIM2Q9P1W9 311 aa11.35□□□□□ -0.59
PSMA6-209ENST00000554961 CCDC61Q9Y6R9 512 aa11.35□□□□□ -0.59
PSMA6-209ENST00000554961 CASP8AP2Q9UKL3 1982 aa11.35□□□□□ -0.59
PSMA6-209ENST00000554961 LMNB1P20700 586 aa11.34□□□□□ -0.59
PSMA6-209ENST00000554961 SLC17A8Q8NDX2 589 aa11.34□□□□□ -0.59
PSMA6-209ENST00000554961 TSKSQ9UJT2 592 aa11.34□□□□□ -0.59
PSMA6-209ENST00000554961 RASSF7Q02833 373 aa11.33□□□□□ -0.6
PSMA6-209ENST00000554961 CCER1Q8TC90 406 aaPredicted RBP11.33□□□□□ -0.6
PSMA6-209ENST00000554961 DCAF11Q8TEB1 546 aa11.33□□□□□ -0.6
PSMA6-209ENST00000554961 TRAK1Q9UPV9 953 aa11.33□□□□□ -0.6
PSMA6-209ENST00000554961 COL6A3P12111 3177 aa11.32□□□□□ -0.6
PSMA6-209ENST00000554961 CCDC88AQ3V6T2 1871 aa11.32□□□□□ -0.6
PSMA6-209ENST00000554961 ADAMTSL1Q8N6G6 1762 aa11.32□□□□□ -0.6
PSMA6-209ENST00000554961 CA12O43570 354 aa11.32□□□□□ -0.6
PSMA6-209ENST00000554961 ITGBL1O95965 494 aaPredicted RBP11.32□□□□□ -0.6
PSMA6-209ENST00000554961 DDX54Q8TDD1 881 aaKnown RBP11.32□□□□□ -0.6
PSMA6-209ENST00000554961 CCDC87Q9NVE4 849 aa11.32□□□□□ -0.6
PSMA6-209ENST00000554961 PALLDQ8WX93 1383 aa11.31□□□□□ -0.6
PSMA6-209ENST00000554961 MEGF6O75095 1541 aa11.31□□□□□ -0.6
PSMA6-209ENST00000554961 NEUROD1Q13562 356 aa11.31□□□□□ -0.6
PSMA6-209ENST00000554961 LDHDQ86WU2 507 aa11.31□□□□□ -0.6
PSMA6-209ENST00000554961 NLRP2Q9NX02 1062 aa11.31□□□□□ -0.6
PSMA6-209ENST00000554961 FAM208AQ9UK61 1670 aaKnown RBP11.3□□□□□ -0.6
PSMA6-209ENST00000554961 TONSLQ96HA7 1378 aa11.3□□□□□ -0.6
PSMA6-209ENST00000554961 KCNH5Q8NCM2 988 aa11.3□□□□□ -0.6
PSMA6-209ENST00000554961 DPY19L2Q6NUT2 758 aa11.29□□□□□ -0.6
PSMA6-209ENST00000554961 SCN4AP35499 1836 aa11.29□□□□□ -0.6
PSMA6-209ENST00000554961 DICER1Q9UPY3 1922 aaKnown RBP11.29□□□□□ -0.6
PSMA6-209ENST00000554961 CAPNS2Q96L46 248 aa11.28□□□□□ -0.6
PSMA6-209ENST00000554961 SIN3AQ96ST3 1273 aa11.28□□□□□ -0.6
PSMA6-209ENST00000554961 CDK19Q9BWU1 502 aa11.28□□□□□ -0.6
PSMA6-209ENST00000554961 KDM2AQ9Y2K7 1162 aa11.28□□□□□ -0.6
PSMA6-209ENST00000554961 LTN1O94822 1766 aa11.27□□□□□ -0.61
PSMA6-209ENST00000554961 DLEC1Q9Y238 1755 aa11.27□□□□□ -0.61
PSMA6-209ENST00000554961 ECE1P42892 770 aa11.27□□□□□ -0.61
PSMA6-209ENST00000554961 POTEHQ6S545 545 aa11.27□□□□□ -0.61
PSMA6-209ENST00000554961 L3MBTL2Q969R5 705 aa11.27□□□□□ -0.61
PSMA6-209ENST00000554961 GPR101Q96P66 508 aaPredicted RBP11.27□□□□□ -0.61
PSMA6-209ENST00000554961 ABT1Q9ULW3 272 aaKnown RBP11.27□□□□□ -0.61
PSMA6-209ENST00000554961 MAP2P11137 1827 aaKnown RBP11.27□□□□□ -0.61
PSMA6-209ENST00000554961 MKI67P46013 3256 aaKnown RBP11.26□□□□□ -0.61
PSMA6-209ENST00000554961 MNX1P50219 401 aaPredicted RBP11.25□□□□□ -0.61
PSMA6-209ENST00000554961 NLGN1Q8N2Q7 840 aa11.25□□□□□ -0.61
PSMA6-209ENST00000554961 SLC24A1O60721 1099 aa11.24□□□□□ -0.61
PSMA6-209ENST00000554961 MAP2K2P36507 400 aa11.24□□□□□ -0.61
PSMA6-209ENST00000554961 IQCA1LA6NCM1 817 aa11.23□□□□□ -0.61
PSMA6-209ENST00000554961 SOX12O15370 315 aa11.23□□□□□ -0.61
PSMA6-209ENST00000554961 NFKBIEO00221 500 aa11.22□□□□□ -0.61
PSMA6-209ENST00000554961 GNPATO15228 680 aa11.22□□□□□ -0.61
PSMA6-209ENST00000554961 TMF1P82094 1093 aa11.22□□□□□ -0.61
PSMA6-209ENST00000554961 CYP4F22Q6NT55 531 aa11.22□□□□□ -0.61
PSMA6-209ENST00000554961 PARP3Q9Y6F1 533 aa11.22□□□□□ -0.61
PSMA6-209ENST00000554961 UNC80Q8N2C7 3258 aa11.22□□□□□ -0.61
PSMA6-209ENST00000554961 CHRNA5P30532 468 aa11.21□□□□□ -0.61
PSMA6-209ENST00000554961 BRPF1P55201 1214 aaPredicted RBP11.21□□□□□ -0.61
PSMA6-209ENST00000554961 LINC00116Q8NCU8 138 aa11.21□□□□□ -0.61
PSMA6-209ENST00000554961 TAF1DQ9H5J8 278 aaPredicted RBP11.21□□□□□ -0.61
PSMA6-209ENST00000554961 GRM1Q13255 1194 aa11.2□□□□□ -0.62
PSMA6-209ENST00000554961 PAXIP1Q6ZW49 1069 aaPredicted RBP11.2□□□□□ -0.62
PSMA6-209ENST00000554961 ANKRD24Q8TF21 1146 aa11.2□□□□□ -0.62
PSMA6-209ENST00000554961 ITGB4P16144 1822 aa11.2□□□□□ -0.62
PSMA6-209ENST00000554961 AOC2O75106 756 aa11.19□□□□□ -0.62
PSMA6-209ENST00000554961 MPNDQ8N594 471 aa11.19□□□□□ -0.62
PSMA6-209ENST00000554961 L3MBTL3Q96JM7 780 aaPredicted RBP11.19□□□□□ -0.62
PSMA6-209ENST00000554961 TRIOBPQ9H2D6 2365 aa11.19□□□□□ -0.62
PSMA6-209ENST00000554961 DDNO94850 711 aaPredicted RBP11.18□□□□□ -0.62
PSMA6-209ENST00000554961 GYS1P13807 737 aa11.18□□□□□ -0.62
PSMA6-209ENST00000554961 SMARCC1Q92922 1105 aaPredicted RBP11.18□□□□□ -0.62
PSMA6-209ENST00000554961 FER1L6Q2WGJ9 1857 aa11.18□□□□□ -0.62
PSMA6-209ENST00000554961 ROCK2O75116 1388 aaKnown RBP11.17□□□□□ -0.62
PSMA6-209ENST00000554961 RANBP2P49792 3224 aaKnown RBP11.17□□□□□ -0.62
PSMA6-209ENST00000554961 NBPF1Q3BBV0 1214 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms