RNA–Protein interactions for RNA: ENST00000554877.1

CCDC85C-202, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 4

Gene CCDC85C, Length 543 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-202ENST00000554877 U2SURPO15042 1029 aaKnown RBP16.64■□□□□ 0.25
CCDC85C-202ENST00000554877 GNPATO15228 680 aa16.64■□□□□ 0.25
CCDC85C-202ENST00000554877 PTCD1O75127 700 aaKnown RBP16.64■□□□□ 0.25
CCDC85C-202ENST00000554877 AMIGO3Q86WK7 504 aa16.64■□□□□ 0.25
CCDC85C-202ENST00000554877 NFATC2IPQ8NCF5 419 aa16.64■□□□□ 0.25
CCDC85C-202ENST00000554877 LY75O60449 1722 aa16.64■□□□□ 0.25
CCDC85C-202ENST00000554877 PKD1L3Q7Z443 1732 aa16.64■□□□□ 0.25
CCDC85C-202ENST00000554877 TOGARAM1Q9Y4F4 1720 aa16.63■□□□□ 0.25
CCDC85C-202ENST00000554877 NLGN2Q8NFZ4 835 aa16.63■□□□□ 0.25
CCDC85C-202ENST00000554877 ITGB4P16144 1822 aa16.63■□□□□ 0.25
CCDC85C-202ENST00000554877 LGR6Q9HBX8 967 aa16.61■□□□□ 0.25
CCDC85C-202ENST00000554877 WWC3Q9ULE0 1092 aa16.61■□□□□ 0.25
CCDC85C-202ENST00000554877 AKAP4Q5JQC9 854 aa16.59■□□□□ 0.25
CCDC85C-202ENST00000554877 SLC4A9Q96Q91 983 aa16.59■□□□□ 0.25
CCDC85C-202ENST00000554877 TUBGCP6Q96RT7 1819 aa16.59■□□□□ 0.25
CCDC85C-202ENST00000554877 SSFA2P28290 1259 aa16.58■□□□□ 0.24
CCDC85C-202ENST00000554877 MTHFSDQ2M296 383 aaKnown RBP16.58■□□□□ 0.24
CCDC85C-202ENST00000554877 TRAPPC3LQ5T215 181 aa16.58■□□□□ 0.24
CCDC85C-202ENST00000554877 RTCBQ9Y3I0 505 aaKnown RBP16.58■□□□□ 0.24
CCDC85C-202ENST00000554877 C5P01031 1676 aa16.57■□□□□ 0.24
CCDC85C-202ENST00000554877 KDM6AO15550 1401 aaPredicted RBP16.57■□□□□ 0.24
CCDC85C-202ENST00000554877 RNMTO43148 476 aaKnown RBP16.56■□□□□ 0.24
CCDC85C-202ENST00000554877 SLC39A6Q13433 755 aa16.56■□□□□ 0.24
CCDC85C-202ENST00000554877 CFAP53Q96M91 514 aa16.56■□□□□ 0.24
CCDC85C-202ENST00000554877 C4BP0C0L5 1744 aa16.56■□□□□ 0.24
CCDC85C-202ENST00000554877 COL3A1P02461 1466 aaPredicted RBP16.55■□□□□ 0.24
CCDC85C-202ENST00000554877 ZEB1P37275 1124 aaPredicted RBP16.55■□□□□ 0.24
CCDC85C-202ENST00000554877 KDRP35968 1356 aa16.54■□□□□ 0.24
CCDC85C-202ENST00000554877 RFC4P35249 363 aa16.54■□□□□ 0.24
CCDC85C-202ENST00000554877 ARHGEF1Q92888 912 aaKnown RBP16.54■□□□□ 0.24
CCDC85C-202ENST00000554877 SLC52A2Q9HAB3 445 aa16.54■□□□□ 0.24
CCDC85C-202ENST00000554877 QSER1Q2KHR3 1735 aa16.53■□□□□ 0.24
CCDC85C-202ENST00000554877 MAP3K5Q99683 1374 aa16.53■□□□□ 0.24
CCDC85C-202ENST00000554877 TAF1LQ8IZX4 1826 aa16.53■□□□□ 0.24
CCDC85C-202ENST00000554877 RPS6KA4O75676 772 aa16.52■□□□□ 0.24
CCDC85C-202ENST00000554877 MMP10P09238 476 aa16.52■□□□□ 0.24
CCDC85C-202ENST00000554877 YBX3P16989 372 aaKnown RBP eCLIP16.52■□□□□ 0.24
CCDC85C-202ENST00000554877 CRKLP46109 303 aaKnown RBP16.52■□□□□ 0.24
CCDC85C-202ENST00000554877 PLEKHG2Q9H7P9 1386 aa16.51■□□□□ 0.23
CCDC85C-202ENST00000554877 RC3H1Q5TC82 1133 aaKnown RBP16.51■□□□□ 0.23
CCDC85C-202ENST00000554877 DNAJC10Q8IXB1 793 aa16.51■□□□□ 0.23
CCDC85C-202ENST00000554877 NUDCQ9Y266 331 aa16.51■□□□□ 0.23
CCDC85C-202ENST00000554877 CD2APQ9Y5K6 639 aa16.51■□□□□ 0.23
CCDC85C-202ENST00000554877 U2AF1L5P0DN76 240 aaPredicted RBP16.5■□□□□ 0.23
CCDC85C-202ENST00000554877 PPP2R1AP30153 589 aa16.5■□□□□ 0.23
CCDC85C-202ENST00000554877 U2AF1Q01081 240 aaKnown RBP eCLIP16.5■□□□□ 0.23
CCDC85C-202ENST00000554877 ZNF784Q8NCA9 323 aaPredicted RBP16.5■□□□□ 0.23
CCDC85C-202ENST00000554877 PRKAR2BP31323 418 aa16.49■□□□□ 0.23
CCDC85C-202ENST00000554877 NLGN1Q8N2Q7 840 aa16.49■□□□□ 0.23
CCDC85C-202ENST00000554877 SRP68Q9UHB9 627 aaKnown RBP16.49■□□□□ 0.23
CCDC85C-202ENST00000554877 CNTNAP4Q9C0A0 1308 aa16.48■□□□□ 0.23
CCDC85C-202ENST00000554877 GNAT3A8MTJ3 354 aa16.48■□□□□ 0.23
CCDC85C-202ENST00000554877 GRIN3BO60391 1043 aa16.48■□□□□ 0.23
CCDC85C-202ENST00000554877 TEFQ10587 303 aa16.48■□□□□ 0.23
CCDC85C-202ENST00000554877 GAS2L2Q8NHY3 880 aa16.48■□□□□ 0.23
CCDC85C-202ENST00000554877 PHACTR3Q96KR7 559 aa16.48■□□□□ 0.23
CCDC85C-202ENST00000554877 TTC5Q8N0Z6 440 aa16.47■□□□□ 0.23
CCDC85C-202ENST00000554877 PARP3Q9Y6F1 533 aa16.47■□□□□ 0.23
CCDC85C-202ENST00000554877 UBR3Q6ZT12 1888 aa16.46■□□□□ 0.23
CCDC85C-202ENST00000554877 GYS1P13807 737 aa16.46■□□□□ 0.23
CCDC85C-202ENST00000554877 ADRA2BP18089 450 aa16.46■□□□□ 0.23
CCDC85C-202ENST00000554877 INTS5Q6P9B9 1019 aaKnown RBP16.46■□□□□ 0.23
CCDC85C-202ENST00000554877 IL17REQ8NFR9 667 aa16.46■□□□□ 0.23
CCDC85C-202ENST00000554877 CCDC87Q9NVE4 849 aa16.46■□□□□ 0.23
CCDC85C-202ENST00000554877 A0A0G2JLW4 131 aa16.45■□□□□ 0.22
CCDC85C-202ENST00000554877 ZPR1O75312 459 aa16.45■□□□□ 0.22
CCDC85C-202ENST00000554877 CANXP27824 592 aaKnown RBP16.45■□□□□ 0.22
CCDC85C-202ENST00000554877 ZNF330Q9Y3S2 320 aaPredicted RBP16.45■□□□□ 0.22
CCDC85C-202ENST00000554877 CYP19A1P11511 503 aaPredicted RBP16.43■□□□□ 0.22
CCDC85C-202ENST00000554877 FKBP8Q14318 412 aa16.43■□□□□ 0.22
CCDC85C-202ENST00000554877 USPL1Q5W0Q7 1092 aa16.43■□□□□ 0.22
CCDC85C-202ENST00000554877 RSPH6AQ9H0K4 717 aa16.43■□□□□ 0.22
CCDC85C-202ENST00000554877 COL24A1Q17RW2 1714 aa16.42■□□□□ 0.22
CCDC85C-202ENST00000554877 RTF1Q92541 710 aaKnown RBP16.42■□□□□ 0.22
CCDC85C-202ENST00000554877 ADAMTS7Q9UKP4 1686 aa16.42■□□□□ 0.22
CCDC85C-202ENST00000554877 VIRMAQ69YN4 1812 aaKnown RBP16.41■□□□□ 0.22
CCDC85C-202ENST00000554877 KCNQ3O43525 872 aa16.41■□□□□ 0.22
CCDC85C-202ENST00000554877 DCTN1Q14203 1278 aa16.41■□□□□ 0.22
CCDC85C-202ENST00000554877 MCM10Q7L590 875 aa16.41■□□□□ 0.22
CCDC85C-202ENST00000554877 ZNF496Q96IT1 587 aaPredicted RBP16.41■□□□□ 0.22
CCDC85C-202ENST00000554877 BCS1LQ9Y276 419 aa16.41■□□□□ 0.22
CCDC85C-202ENST00000554877 ZBTB1Q9Y2K1 713 aa16.41■□□□□ 0.22
CCDC85C-202ENST00000554877 SCN11AQ9UI33 1791 aa16.41■□□□□ 0.22
CCDC85C-202ENST00000554877 BTBD11A6QL63 1104 aa16.4■□□□□ 0.22
CCDC85C-202ENST00000554877 STARD3NLO95772 234 aa16.4■□□□□ 0.22
CCDC85C-202ENST00000554877 DPEP1P16444 411 aa16.4■□□□□ 0.22
CCDC85C-202ENST00000554877 DDX10Q13206 875 aaKnown RBP16.4■□□□□ 0.22
CCDC85C-202ENST00000554877 ZNF790Q6PG37 636 aa16.4■□□□□ 0.22
CCDC85C-202ENST00000554877 BICDL1Q6ZP65 573 aa16.4■□□□□ 0.22
CCDC85C-202ENST00000554877 ZNF526Q8TF50 670 aaPredicted RBP16.4■□□□□ 0.22
CCDC85C-202ENST00000554877 USP42Q9H9J4 1324 aaKnown RBP16.4■□□□□ 0.22
CCDC85C-202ENST00000554877 FCHSD2O94868 740 aa16.39■□□□□ 0.21
CCDC85C-202ENST00000554877 NEFMP07197 916 aa16.39■□□□□ 0.21
CCDC85C-202ENST00000554877 MYH14Q7Z406 1995 aaKnown RBP16.38■□□□□ 0.21
CCDC85C-202ENST00000554877 TGFB2P61812 414 aa16.38■□□□□ 0.21
CCDC85C-202ENST00000554877 NPM2Q86SE8 214 aaKnown RBP16.38■□□□□ 0.21
CCDC85C-202ENST00000554877 SOS1Q07889 1333 aaPredicted RBP16.38■□□□□ 0.21
CCDC85C-202ENST00000554877 DDR1Q08345 913 aa16.37■□□□□ 0.21
CCDC85C-202ENST00000554877 ARHGAP27Q6ZUM4 889 aa16.37■□□□□ 0.21
CCDC85C-202ENST00000554877 VSIG10Q8N0Z9 540 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms