RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 VWA5B2Q8N398 1253 aa3.19□□□□□ -1.9
PRPF39-208ENST00000554785 ARHGEF10LQ9HCE6 1279 aa3.19□□□□□ -1.9
PRPF39-208ENST00000554785 ADAMTS2O95450 1211 aa3.18□□□□□ -1.9
PRPF39-208ENST00000554785 RNF20Q5VTR2 975 aa3.18□□□□□ -1.9
PRPF39-208ENST00000554785 LYSMD3Q7Z3D4 306 aa3.18□□□□□ -1.9
PRPF39-208ENST00000554785 COG6Q9Y2V7 657 aa3.18□□□□□ -1.9
PRPF39-208ENST00000554785 CDC14CA4D256 554 aa3.17□□□□□ -1.9
PRPF39-208ENST00000554785 IL2RAP01589 272 aa3.17□□□□□ -1.9
PRPF39-208ENST00000554785 POU4F2Q12837 409 aa3.17□□□□□ -1.9
PRPF39-208ENST00000554785 MBIPQ9NS73 344 aa3.17□□□□□ -1.9
PRPF39-208ENST00000554785 CHIC2Q9UKJ5 165 aa3.17□□□□□ -1.9
PRPF39-208ENST00000554785 H7C1W4 665 aa3.17□□□□□ -1.9
PRPF39-208ENST00000554785 APBB1O00213 710 aa3.17□□□□□ -1.9
PRPF39-208ENST00000554785 PIK3CDO00329 1044 aa3.17□□□□□ -1.9
PRPF39-208ENST00000554785 CELA2BP08218 269 aaPredicted RBP3.17□□□□□ -1.9
PRPF39-208ENST00000554785 BAG6P46379 1132 aa3.17□□□□□ -1.9
PRPF39-208ENST00000554785 MCCD1P59942 119 aaPredicted RBP3.17□□□□□ -1.9
PRPF39-208ENST00000554785 CLN3Q13286 438 aa3.17□□□□□ -1.9
PRPF39-208ENST00000554785 CNKSR1Q969H4 720 aa3.17□□□□□ -1.9
PRPF39-208ENST00000554785 GRIP2Q9C0E4 1043 aa3.17□□□□□ -1.9
PRPF39-208ENST00000554785 ZNF330Q9Y3S2 320 aaPredicted RBP3.17□□□□□ -1.9
PRPF39-208ENST00000554785 HRH3Q9Y5N1 445 aa3.17□□□□□ -1.9
PRPF39-208ENST00000554785 GTF3C3Q9Y5Q9 886 aa3.17□□□□□ -1.9
PRPF39-208ENST00000554785 THBS1P07996 1170 aa3.16□□□□□ -1.9
PRPF39-208ENST00000554785 BCRP11274 1271 aa3.16□□□□□ -1.9
PRPF39-208ENST00000554785 EIF4G2P78344 907 aaKnown RBP eCLIP3.16□□□□□ -1.9
PRPF39-208ENST00000554785 GAS6Q14393 721 aa3.16□□□□□ -1.9
PRPF39-208ENST00000554785 DBN1Q16643 649 aa3.16□□□□□ -1.9
PRPF39-208ENST00000554785 CYP2U1Q7Z449 544 aa3.16□□□□□ -1.9
PRPF39-208ENST00000554785 WHAMMQ8TF30 809 aa3.16□□□□□ -1.9
PRPF39-208ENST00000554785 DCAF5Q96JK2 942 aa3.16□□□□□ -1.9
PRPF39-208ENST00000554785 GPR25O00155 361 aa3.16□□□□□ -1.9
PRPF39-208ENST00000554785 GPC1P35052 558 aa3.16□□□□□ -1.9
PRPF39-208ENST00000554785 CENPCQ03188 943 aa3.16□□□□□ -1.9
PRPF39-208ENST00000554785 OXLD1Q5BKU9 147 aa3.16□□□□□ -1.9
PRPF39-208ENST00000554785 SLC27A3Q5K4L6 730 aa3.16□□□□□ -1.9
PRPF39-208ENST00000554785 NBPF10Q6P3W6 841 aaKnown RBP3.16□□□□□ -1.9
PRPF39-208ENST00000554785 NBPF15Q8N660 670 aa3.16□□□□□ -1.9
PRPF39-208ENST00000554785 ESYT1Q9BSJ8 1104 aa3.16□□□□□ -1.9
PRPF39-208ENST00000554785 ETNK1Q9HBU6 452 aa3.16□□□□□ -1.9
PRPF39-208ENST00000554785 DOLKQ9UPQ8 538 aa3.16□□□□□ -1.9
PRPF39-208ENST00000554785 POM121CA8CG34 1229 aa3.15□□□□□ -1.91
PRPF39-208ENST00000554785 GNRH1P01148 92 aa3.15□□□□□ -1.91
PRPF39-208ENST00000554785 ITGB2P05107 769 aa3.15□□□□□ -1.91
PRPF39-208ENST00000554785 PHKA2P46019 1235 aa3.15□□□□□ -1.91
PRPF39-208ENST00000554785 SCNN1DP51172 638 aa3.15□□□□□ -1.91
PRPF39-208ENST00000554785 SLFNL1Q499Z3 407 aa3.15□□□□□ -1.91
PRPF39-208ENST00000554785 LYPD4Q6UWN0 246 aa3.15□□□□□ -1.91
PRPF39-208ENST00000554785 RNF135Q8IUD6 432 aa3.15□□□□□ -1.91
PRPF39-208ENST00000554785 NEDD1Q8NHV4 660 aa3.15□□□□□ -1.91
PRPF39-208ENST00000554785 ADAMTS19Q8TE59 1207 aa3.15□□□□□ -1.91
PRPF39-208ENST00000554785 ZNF837Q96EG3 531 aaPredicted RBP3.15□□□□□ -1.91
PRPF39-208ENST00000554785 NLRP3Q96P20 1036 aa3.15□□□□□ -1.91
PRPF39-208ENST00000554785 TRERF1Q96PN7 1200 aa3.15□□□□□ -1.91
PRPF39-208ENST00000554785 GAS2L1Q99501 681 aaPredicted RBP3.15□□□□□ -1.91
PRPF39-208ENST00000554785 RIPOR1Q6ZS17 1223 aa3.14□□□□□ -1.91
PRPF39-208ENST00000554785 LSRQ86X29 649 aaPredicted RBP3.14□□□□□ -1.91
PRPF39-208ENST00000554785 TRIM22Q8IYM9 498 aa3.14□□□□□ -1.91
PRPF39-208ENST00000554785 XAGE2Q96GT9 111 aa3.14□□□□□ -1.91
PRPF39-208ENST00000554785 FHDC1Q9C0D6 1143 aaPredicted RBP3.14□□□□□ -1.91
PRPF39-208ENST00000554785 ALG2Q9H553 416 aa3.14□□□□□ -1.91
PRPF39-208ENST00000554785 DYRK1BQ9Y463 629 aa3.14□□□□□ -1.91
PRPF39-208ENST00000554785 SPATA31C2B4DYI2 1134 aa3.14□□□□□ -1.91
PRPF39-208ENST00000554785 WASLO00401 505 aaPredicted RBP3.14□□□□□ -1.91
PRPF39-208ENST00000554785 MAP2K3P46734 347 aa3.14□□□□□ -1.91
PRPF39-208ENST00000554785 USP4Q13107 963 aa3.14□□□□□ -1.91
PRPF39-208ENST00000554785 WDR44Q5JSH3 913 aa3.14□□□□□ -1.91
PRPF39-208ENST00000554785 PLPP7Q8NBV4 271 aa3.14□□□□□ -1.91
PRPF39-208ENST00000554785 ZNF592Q92610 1267 aa3.14□□□□□ -1.91
PRPF39-208ENST00000554785 PRM3Q9NNZ6 103 aa3.14□□□□□ -1.91
PRPF39-208ENST00000554785 MYCP01106 439 aaPredicted RBP3.13□□□□□ -1.91
PRPF39-208ENST00000554785 FURINP09958 794 aa3.13□□□□□ -1.91
PRPF39-208ENST00000554785 SEMA3FQ13275 785 aa3.13□□□□□ -1.91
PRPF39-208ENST00000554785 WASHC4Q2M389 1173 aa3.13□□□□□ -1.91
PRPF39-208ENST00000554785 GTPBP3Q969Y2 492 aaKnown RBP3.13□□□□□ -1.91
PRPF39-208ENST00000554785 ESF1Q9H501 851 aaKnown RBP3.13□□□□□ -1.91
PRPF39-208ENST00000554785 GPAMQ9HCL2 828 aa3.13□□□□□ -1.91
PRPF39-208ENST00000554785 TMEM229AB2RXF0 380 aa3.13□□□□□ -1.91
PRPF39-208ENST00000554785 C4orf17Q53FE4 359 aa3.13□□□□□ -1.91
PRPF39-208ENST00000554785 ZMYM1Q5SVZ6 1142 aa3.13□□□□□ -1.91
PRPF39-208ENST00000554785 TAS1R3Q7RTX0 852 aa3.13□□□□□ -1.91
PRPF39-208ENST00000554785 DEPDC4Q8N2C3 294 aa3.13□□□□□ -1.91
PRPF39-208ENST00000554785 CLUAP1Q96AJ1 413 aa3.13□□□□□ -1.91
PRPF39-208ENST00000554785 ZSCAN10Q96SZ4 725 aaPredicted RBP3.13□□□□□ -1.91
PRPF39-208ENST00000554785 TIMMDC1Q9NPL8 285 aa3.13□□□□□ -1.91
PRPF39-208ENST00000554785 MKL2Q9ULH7 1088 aa3.13□□□□□ -1.91
PRPF39-208ENST00000554785 PCDHGA11Q9Y5H2 935 aa3.13□□□□□ -1.91
PRPF39-208ENST00000554785 USP3Q9Y6I4 520 aa3.13□□□□□ -1.91
PRPF39-208ENST00000554785 IGF1RP08069 1367 aa3.12□□□□□ -1.91
PRPF39-208ENST00000554785 INHAP05111 366 aa3.12□□□□□ -1.91
PRPF39-208ENST00000554785 GDF10P55107 478 aa3.12□□□□□ -1.91
PRPF39-208ENST00000554785 UBAP2LQ14157 1087 aaKnown RBP3.12□□□□□ -1.91
PRPF39-208ENST00000554785 ZNF295-AS1Q8N0V1 137 aa3.12□□□□□ -1.91
PRPF39-208ENST00000554785 UCN2Q96RP3 112 aa3.12□□□□□ -1.91
PRPF39-208ENST00000554785 GDF2Q9UK05 429 aaPredicted RBP3.12□□□□□ -1.91
PRPF39-208ENST00000554785 PHF24Q9UPV7 400 aa3.12□□□□□ -1.91
PRPF39-208ENST00000554785 OIP5O43482 229 aa3.11□□□□□ -1.91
PRPF39-208ENST00000554785 F11P03951 625 aa3.11□□□□□ -1.91
PRPF39-208ENST00000554785 NCOA4Q13772 614 aa3.11□□□□□ -1.91
PRPF39-208ENST00000554785 PPARGC1BQ86YN6 1023 aaKnown RBP3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms