RNA–Protein interactions for RNA: ENST00000554541.5

PSMA6-206, Transcript of proteasome subunit alpha 6, humanhuman

TSL 2

Gene PSMA6, Length 925 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA6-206ENST00000554541 SCN11AQ9UI33 1791 aa15.71■□□□□ 0.11
PSMA6-206ENST00000554541 ITPK1Q13572 414 aa15.7■□□□□ 0.1
PSMA6-206ENST00000554541 LINC00116Q8NCU8 138 aa15.7■□□□□ 0.1
PSMA6-206ENST00000554541 AK7Q96M32 723 aa15.7■□□□□ 0.1
PSMA6-206ENST00000554541 MSH5O43196 834 aa15.69■□□□□ 0.1
PSMA6-206ENST00000554541 HMOX1P09601 288 aa15.69■□□□□ 0.1
PSMA6-206ENST00000554541 ATP6V1AP38606 617 aa15.69■□□□□ 0.1
PSMA6-206ENST00000554541 CABP4P57796 275 aa15.69■□□□□ 0.1
PSMA6-206ENST00000554541 AKAP4Q5JQC9 854 aa15.69■□□□□ 0.1
PSMA6-206ENST00000554541 AMIGO3Q86WK7 504 aa15.69■□□□□ 0.1
PSMA6-206ENST00000554541 COL5A3P25940 1745 aaPredicted RBP15.68■□□□□ 0.1
PSMA6-206ENST00000554541 SSFA2P28290 1259 aa15.67■□□□□ 0.1
PSMA6-206ENST00000554541 CNGB1Q14028 1251 aaPredicted RBP15.67■□□□□ 0.1
PSMA6-206ENST00000554541 SLC4A9Q96Q91 983 aa15.67■□□□□ 0.1
PSMA6-206ENST00000554541 ADAMTS7Q9UKP4 1686 aa15.67■□□□□ 0.1
PSMA6-206ENST00000554541 VIRMAQ69YN4 1812 aaKnown RBP15.66■□□□□ 0.1
PSMA6-206ENST00000554541 MRC1P22897 1456 aa15.66■□□□□ 0.1
PSMA6-206ENST00000554541 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.66■□□□□ 0.1
PSMA6-206ENST00000554541 NFATC2IPQ8NCF5 419 aa15.66■□□□□ 0.1
PSMA6-206ENST00000554541 CICQ96RK0 1608 aaPredicted RBP15.65■□□□□ 0.1
PSMA6-206ENST00000554541 MSL1Q68DK7 614 aa15.65■□□□□ 0.1
PSMA6-206ENST00000554541 RBM42Q9BTD8 480 aaKnown RBP15.65■□□□□ 0.1
PSMA6-206ENST00000554541 GNPATO15228 680 aa15.64■□□□□ 0.09
PSMA6-206ENST00000554541 PHF14O94880 888 aa15.64■□□□□ 0.09
PSMA6-206ENST00000554541 MTHFSDQ2M296 383 aaKnown RBP15.64■□□□□ 0.09
PSMA6-206ENST00000554541 SMIM5Q71RC9 77 aa15.64■□□□□ 0.09
PSMA6-206ENST00000554541 RC3H1Q5TC82 1133 aaKnown RBP15.63■□□□□ 0.09
PSMA6-206ENST00000554541 SLC52A2Q9HAB3 445 aa15.63■□□□□ 0.09
PSMA6-206ENST00000554541 LGR6Q9HBX8 967 aa15.63■□□□□ 0.09
PSMA6-206ENST00000554541 CNTNAP4Q9C0A0 1308 aa15.63■□□□□ 0.09
PSMA6-206ENST00000554541 MYH14Q7Z406 1995 aaKnown RBP15.62■□□□□ 0.09
PSMA6-206ENST00000554541 U2SURPO15042 1029 aaKnown RBP15.62■□□□□ 0.09
PSMA6-206ENST00000554541 RNMTO43148 476 aaKnown RBP15.62■□□□□ 0.09
PSMA6-206ENST00000554541 YY1P25490 414 aa15.62■□□□□ 0.09
PSMA6-206ENST00000554541 PPP2R1AP30153 589 aa15.62■□□□□ 0.09
PSMA6-206ENST00000554541 KLHL34Q8N239 644 aa15.62■□□□□ 0.09
PSMA6-206ENST00000554541 CFAP53Q96M91 514 aa15.62■□□□□ 0.09
PSMA6-206ENST00000554541 TJP1Q07157 1748 aa15.62■□□□□ 0.09
PSMA6-206ENST00000554541 PTCD1O75127 700 aaKnown RBP15.61■□□□□ 0.09
PSMA6-206ENST00000554541 NLGN2Q8NFZ4 835 aa15.61■□□□□ 0.09
PSMA6-206ENST00000554541 RTCBQ9Y3I0 505 aaKnown RBP15.61■□□□□ 0.09
PSMA6-206ENST00000554541 ADRA2BP18089 450 aa15.6■□□□□ 0.09
PSMA6-206ENST00000554541 CHD4Q14839 1912 aa15.6■□□□□ 0.09
PSMA6-206ENST00000554541 RPS6KA4O75676 772 aa15.59■□□□□ 0.09
PSMA6-206ENST00000554541 TRAPPC3LQ5T215 181 aa15.59■□□□□ 0.09
PSMA6-206ENST00000554541 CD2APQ9Y5K6 639 aa15.59■□□□□ 0.09
PSMA6-206ENST00000554541 C4AP0C0L4 1744 aa15.58■□□□□ 0.08
PSMA6-206ENST00000554541 GAS2L2Q8NHY3 880 aa15.58■□□□□ 0.08
PSMA6-206ENST00000554541 RSPH6AQ9H0K4 717 aa15.58■□□□□ 0.08
PSMA6-206ENST00000554541 KCPQ6ZWJ8 1503 aa15.58■□□□□ 0.08
PSMA6-206ENST00000554541 UBR2Q8IWV8 1755 aa15.57■□□□□ 0.08
PSMA6-206ENST00000554541 GPR162Q16538 588 aa15.57■□□□□ 0.08
PSMA6-206ENST00000554541 ARHGEF1Q92888 912 aaKnown RBP15.57■□□□□ 0.08
PSMA6-206ENST00000554541 NUDCQ9Y266 331 aa15.57■□□□□ 0.08
PSMA6-206ENST00000554541 GNAT3A8MTJ3 354 aa15.56■□□□□ 0.08
PSMA6-206ENST00000554541 PRKAR2BP31323 418 aa15.56■□□□□ 0.08
PSMA6-206ENST00000554541 CRKLP46109 303 aaKnown RBP15.56■□□□□ 0.08
PSMA6-206ENST00000554541 SLC39A6Q13433 755 aa15.56■□□□□ 0.08
PSMA6-206ENST00000554541 PHACTR3Q96KR7 559 aa15.56■□□□□ 0.08
PSMA6-206ENST00000554541 SIPA1L3O60292 1781 aaPredicted RBP15.56■□□□□ 0.08
PSMA6-206ENST00000554541 NLGN1Q8N2Q7 840 aa15.55■□□□□ 0.08
PSMA6-206ENST00000554541 IL17REQ8NFR9 667 aa15.55■□□□□ 0.08
PSMA6-206ENST00000554541 CEMIPQ8WUJ3 1361 aa15.54■□□□□ 0.08
PSMA6-206ENST00000554541 MMP10P09238 476 aa15.54■□□□□ 0.08
PSMA6-206ENST00000554541 U2AF1L5P0DN76 240 aaPredicted RBP15.54■□□□□ 0.08
PSMA6-206ENST00000554541 GYS1P13807 737 aa15.54■□□□□ 0.08
PSMA6-206ENST00000554541 RFC4P35249 363 aa15.54■□□□□ 0.08
PSMA6-206ENST00000554541 U2AF1Q01081 240 aaKnown RBP eCLIP15.54■□□□□ 0.083e-6■■□□□ 13.5
PSMA6-206ENST00000554541 INTS5Q6P9B9 1019 aaKnown RBP15.54■□□□□ 0.08
PSMA6-206ENST00000554541 DNAJC10Q8IXB1 793 aa15.54■□□□□ 0.08
PSMA6-206ENST00000554541 VSIG10Q8N0Z9 540 aa15.54■□□□□ 0.08
PSMA6-206ENST00000554541 UTRNP46939 3433 aa15.53■□□□□ 0.08
PSMA6-206ENST00000554541 KIF13BQ9NQT8 1826 aa15.53■□□□□ 0.08
PSMA6-206ENST00000554541 FCHSD2O94868 740 aa15.53■□□□□ 0.08
PSMA6-206ENST00000554541 CYP19A1P11511 503 aaPredicted RBP15.52■□□□□ 0.08
PSMA6-206ENST00000554541 YBX3P16989 372 aaKnown RBP eCLIP15.52■□□□□ 0.08
PSMA6-206ENST00000554541 TEFQ10587 303 aa15.52■□□□□ 0.08
PSMA6-206ENST00000554541 PELP1Q8IZL8 1130 aaKnown RBP15.52■□□□□ 0.08
PSMA6-206ENST00000554541 CCDC87Q9NVE4 849 aa15.52■□□□□ 0.08
PSMA6-206ENST00000554541 USP42Q9H9J4 1324 aaKnown RBP15.51■□□□□ 0.07
PSMA6-206ENST00000554541 GRIN3BO60391 1043 aa15.51■□□□□ 0.07
PSMA6-206ENST00000554541 SOS1Q07889 1333 aaPredicted RBP15.5■□□□□ 0.07
PSMA6-206ENST00000554541 ZNF790Q6PG37 636 aa15.5■□□□□ 0.07
PSMA6-206ENST00000554541 TTC5Q8N0Z6 440 aa15.5■□□□□ 0.07
PSMA6-206ENST00000554541 ZNF496Q96IT1 587 aaPredicted RBP15.49■□□□□ 0.07
PSMA6-206ENST00000554541 C10orf71Q711Q0 1435 aa15.49■□□□□ 0.07
PSMA6-206ENST00000554541 KIAA1551Q9HCM1 1747 aa15.48■□□□□ 0.07
PSMA6-206ENST00000554541 ZNF784Q8NCA9 323 aaPredicted RBP15.48■□□□□ 0.07
PSMA6-206ENST00000554541 SRP68Q9UHB9 627 aaKnown RBP15.48■□□□□ 0.07
PSMA6-206ENST00000554541 HEG1Q9ULI3 1381 aa15.48■□□□□ 0.07
PSMA6-206ENST00000554541 HTATSF1O43719 755 aaKnown RBP15.47■□□□□ 0.07
PSMA6-206ENST00000554541 FKBP8Q14318 412 aa15.47■□□□□ 0.07
PSMA6-206ENST00000554541 ZBTB1Q9Y2K1 713 aa15.47■□□□□ 0.07
PSMA6-206ENST00000554541 PARP3Q9Y6F1 533 aa15.47■□□□□ 0.07
PSMA6-206ENST00000554541 COL15A1P39059 1388 aa15.47■□□□□ 0.07
PSMA6-206ENST00000554541 PXDNLA1KZ92 1463 aa15.46■□□□□ 0.07
PSMA6-206ENST00000554541 STARD3NLO95772 234 aa15.46■□□□□ 0.07
PSMA6-206ENST00000554541 TGFB2P61812 414 aa15.46■□□□□ 0.07
PSMA6-206ENST00000554541 RALBP1Q15311 655 aa15.46■□□□□ 0.07
PSMA6-206ENST00000554541 RTF1Q92541 710 aaKnown RBP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms