RNA–Protein interactions for RNA: ENST00000554453.5

ABCD4-221, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-221ENST00000554453 LINC00116Q8NCU8 138 aa15.08■□□□□ 0
ABCD4-221ENST00000554453 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.07■□□□□ 0
ABCD4-221ENST00000554453 SSFA2P28290 1259 aa15.07■□□□□ 0
ABCD4-221ENST00000554453 SLC4A9Q96Q91 983 aa15.07■□□□□ 0
ABCD4-221ENST00000554453 DIAPH1O60610 1272 aaKnown RBP15.06■□□□□ 0
ABCD4-221ENST00000554453 GPR162Q16538 588 aa15.06■□□□□ 0
ABCD4-221ENST00000554453 RC3H1Q5TC82 1133 aaKnown RBP15.06■□□□□ 0
ABCD4-221ENST00000554453 MSL1Q68DK7 614 aa15.06■□□□□ 0
ABCD4-221ENST00000554453 SMIM5Q71RC9 77 aa15.06■□□□□ 0
ABCD4-221ENST00000554453 KLHL34Q8N239 644 aa15.06■□□□□ 0
ABCD4-221ENST00000554453 NFATC2IPQ8NCF5 419 aa15.06■□□□□ 0
ABCD4-221ENST00000554453 AKAP4Q5JQC9 854 aa15.05■□□□□ -0
ABCD4-221ENST00000554453 RBM42Q9BTD8 480 aaKnown RBP15.05■□□□□ -0
ABCD4-221ENST00000554453 C5P01031 1676 aa15.05■□□□□ -0
ABCD4-221ENST00000554453 C4BP0C0L5 1744 aa15.04■□□□□ -0
ABCD4-221ENST00000554453 PHF14O94880 888 aa15.04■□□□□ -0
ABCD4-221ENST00000554453 NLGN2Q8NFZ4 835 aa15.04■□□□□ -0
ABCD4-221ENST00000554453 CD2APQ9Y5K6 639 aa15.04■□□□□ -0
ABCD4-221ENST00000554453 CHD4Q14839 1912 aa15.04■□□□□ -0
ABCD4-221ENST00000554453 KDM6AO15550 1401 aaPredicted RBP15.03■□□□□ -0
ABCD4-221ENST00000554453 GNPATO15228 680 aa15.03■□□□□ -0
ABCD4-221ENST00000554453 HMOX1P09601 288 aa15.03■□□□□ -0
ABCD4-221ENST00000554453 LGR6Q9HBX8 967 aa15.03■□□□□ -0
ABCD4-221ENST00000554453 UBR3Q6ZT12 1888 aa15.02■□□□□ -0
ABCD4-221ENST00000554453 RNMTO43148 476 aaKnown RBP15.02■□□□□ -0
ABCD4-221ENST00000554453 RPS6KA4O75676 772 aa15.02■□□□□ -0
ABCD4-221ENST00000554453 TRAPPC3LQ5T215 181 aa15.02■□□□□ -0
ABCD4-221ENST00000554453 RTCBQ9Y3I0 505 aaKnown RBP15.02■□□□□ -0
ABCD4-221ENST00000554453 PTCD1O75127 700 aaKnown RBP15□□□□□ -0.01
ABCD4-221ENST00000554453 ADRA2BP18089 450 aa15□□□□□ -0.01
ABCD4-221ENST00000554453 MTHFSDQ2M296 383 aaKnown RBP15□□□□□ -0.01
ABCD4-221ENST00000554453 ARHGEF1Q92888 912 aaKnown RBP15□□□□□ -0.01
ABCD4-221ENST00000554453 SLC52A2Q9HAB3 445 aa15□□□□□ -0.01
ABCD4-221ENST00000554453 CNTNAP4Q9C0A0 1308 aa14.99□□□□□ -0.01
ABCD4-221ENST00000554453 MYH14Q7Z406 1995 aaKnown RBP14.99□□□□□ -0.01
ABCD4-221ENST00000554453 GRIN3BO60391 1043 aa14.99□□□□□ -0.01
ABCD4-221ENST00000554453 CNGB1Q14028 1251 aaPredicted RBP14.99□□□□□ -0.01
ABCD4-221ENST00000554453 NLGN1Q8N2Q7 840 aa14.99□□□□□ -0.01
ABCD4-221ENST00000554453 PELP1Q8IZL8 1130 aaKnown RBP14.98□□□□□ -0.01
ABCD4-221ENST00000554453 ZNF784Q8NCA9 323 aaPredicted RBP14.98□□□□□ -0.01
ABCD4-221ENST00000554453 ZNF831Q5JPB2 1677 aa14.97□□□□□ -0.01
ABCD4-221ENST00000554453 YBX3P16989 372 aaKnown RBP eCLIP14.97□□□□□ -0.01
ABCD4-221ENST00000554453 SCN11AQ9UI33 1791 aa14.96□□□□□ -0.01
ABCD4-221ENST00000554453 U2SURPO15042 1029 aaKnown RBP14.96□□□□□ -0.01
ABCD4-221ENST00000554453 RFC4P35249 363 aa14.96□□□□□ -0.01
ABCD4-221ENST00000554453 CRKLP46109 303 aaKnown RBP14.96□□□□□ -0.01
ABCD4-221ENST00000554453 MMP10P09238 476 aa14.95□□□□□ -0.02
ABCD4-221ENST00000554453 SLC39A6Q13433 755 aa14.95□□□□□ -0.02
ABCD4-221ENST00000554453 CFAP53Q96M91 514 aa14.95□□□□□ -0.02
ABCD4-221ENST00000554453 GYS1P13807 737 aa14.94□□□□□ -0.02
ABCD4-221ENST00000554453 INTS5Q6P9B9 1019 aaKnown RBP14.94□□□□□ -0.02
ABCD4-221ENST00000554453 DNAJC10Q8IXB1 793 aa14.94□□□□□ -0.02
ABCD4-221ENST00000554453 GAS2L2Q8NHY3 880 aa14.94□□□□□ -0.02
ABCD4-221ENST00000554453 NUDCQ9Y266 331 aa14.94□□□□□ -0.02
ABCD4-221ENST00000554453 GNAT3A8MTJ3 354 aa14.93□□□□□ -0.02
ABCD4-221ENST00000554453 PPP2R1AP30153 589 aa14.93□□□□□ -0.02
ABCD4-221ENST00000554453 IL17REQ8NFR9 667 aa14.93□□□□□ -0.02
ABCD4-221ENST00000554453 CYP19A1P11511 503 aaPredicted RBP14.92□□□□□ -0.02
ABCD4-221ENST00000554453 VSIG10Q8N0Z9 540 aa14.92□□□□□ -0.02
ABCD4-221ENST00000554453 COL3A1P02461 1466 aaPredicted RBP14.92□□□□□ -0.02
ABCD4-221ENST00000554453 TGFB2P61812 414 aa14.91□□□□□ -0.02
ABCD4-221ENST00000554453 PHACTR3Q96KR7 559 aa14.91□□□□□ -0.02
ABCD4-221ENST00000554453 CCDC87Q9NVE4 849 aa14.91□□□□□ -0.02
ABCD4-221ENST00000554453 FCHSD2O94868 740 aa14.9□□□□□ -0.02
ABCD4-221ENST00000554453 RSPH6AQ9H0K4 717 aa14.9□□□□□ -0.02
ABCD4-221ENST00000554453 COL5A3P25940 1745 aaPredicted RBP14.89□□□□□ -0.03
ABCD4-221ENST00000554453 PRKAR2BP31323 418 aa14.89□□□□□ -0.03
ABCD4-221ENST00000554453 TEFQ10587 303 aa14.89□□□□□ -0.03
ABCD4-221ENST00000554453 SRP68Q9UHB9 627 aaKnown RBP14.89□□□□□ -0.03
ABCD4-221ENST00000554453 PARP3Q9Y6F1 533 aa14.89□□□□□ -0.03
ABCD4-221ENST00000554453 USP42Q9H9J4 1324 aaKnown RBP14.89□□□□□ -0.03
ABCD4-221ENST00000554453 VIRMAQ69YN4 1812 aaKnown RBP14.88□□□□□ -0.03
ABCD4-221ENST00000554453 U2AF1L5P0DN76 240 aaPredicted RBP14.88□□□□□ -0.03
ABCD4-221ENST00000554453 TM4SF1P30408 202 aa14.88□□□□□ -0.03
ABCD4-221ENST00000554453 U2AF1Q01081 240 aaKnown RBP eCLIP14.88□□□□□ -0.03
ABCD4-221ENST00000554453 FKBP8Q14318 412 aa14.88□□□□□ -0.03
ABCD4-221ENST00000554453 TEX13AQ9BXU3 409 aaPredicted RBP14.88□□□□□ -0.03
ABCD4-221ENST00000554453 MRC1P22897 1456 aa14.88□□□□□ -0.03
ABCD4-221ENST00000554453 A0A0G2JLW4 131 aa14.87□□□□□ -0.03
ABCD4-221ENST00000554453 ZPR1O75312 459 aa14.87□□□□□ -0.03
ABCD4-221ENST00000554453 ZNF790Q6PG37 636 aa14.87□□□□□ -0.03
ABCD4-221ENST00000554453 TTC5Q8N0Z6 440 aa14.87□□□□□ -0.03
ABCD4-221ENST00000554453 SOS1Q07889 1333 aaPredicted RBP14.87□□□□□ -0.03
ABCD4-221ENST00000554453 ADAMTS7Q9UKP4 1686 aa14.87□□□□□ -0.03
ABCD4-221ENST00000554453 STARD3NLO95772 234 aa14.86□□□□□ -0.03
ABCD4-221ENST00000554453 ZNF496Q96IT1 587 aaPredicted RBP14.86□□□□□ -0.03
ABCD4-221ENST00000554453 NARFQ9UHQ1 456 aa14.86□□□□□ -0.03
ABCD4-221ENST00000554453 CEMIPQ8WUJ3 1361 aa14.85□□□□□ -0.03
ABCD4-221ENST00000554453 USPL1Q5W0Q7 1092 aa14.85□□□□□ -0.03
ABCD4-221ENST00000554453 ZBTB1Q9Y2K1 713 aa14.85□□□□□ -0.03
ABCD4-221ENST00000554453 UTRNP46939 3433 aa14.85□□□□□ -0.03
ABCD4-221ENST00000554453 HTATSF1O43719 755 aaKnown RBP14.84□□□□□ -0.03
ABCD4-221ENST00000554453 DPEP1P16444 411 aa14.84□□□□□ -0.03
ABCD4-221ENST00000554453 KCNA3P22001 575 aa14.84□□□□□ -0.03
ABCD4-221ENST00000554453 EIF5P55010 431 aaKnown RBP14.84□□□□□ -0.03
ABCD4-221ENST00000554453 DDR1Q08345 913 aa14.84□□□□□ -0.03
ABCD4-221ENST00000554453 WWC3Q9ULE0 1092 aa14.84□□□□□ -0.03
ABCD4-221ENST00000554453 CICQ96RK0 1608 aaPredicted RBP14.84□□□□□ -0.03
ABCD4-221ENST00000554453 TJP1Q07157 1748 aa14.83□□□□□ -0.03
ABCD4-221ENST00000554453 KIF13BQ9NQT8 1826 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms