RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 POLMQ9NP87 494 aaPredicted RBP9.78□□□□□ -0.84
SCFD1-211ENST00000554437 TMEM229AB2RXF0 380 aa9.77□□□□□ -0.85
SCFD1-211ENST00000554437 ATG7O95352 703 aa9.77□□□□□ -0.85
SCFD1-211ENST00000554437 IL2RAP01589 272 aa9.77□□□□□ -0.85
SCFD1-211ENST00000554437 INHAP05111 366 aa9.77□□□□□ -0.85
SCFD1-211ENST00000554437 CLN3Q13286 438 aa9.77□□□□□ -0.85
SCFD1-211ENST00000554437 SIX5Q8N196 739 aa9.77□□□□□ -0.85
SCFD1-211ENST00000554437 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.77□□□□□ -0.85
SCFD1-211ENST00000554437 INSM1Q01101 510 aaPredicted RBP9.76□□□□□ -0.85
SCFD1-211ENST00000554437 DPYDQ12882 1025 aa9.76□□□□□ -0.85
SCFD1-211ENST00000554437 ANKMY2Q8IV38 441 aa9.76□□□□□ -0.85
SCFD1-211ENST00000554437 XAGE2Q96GT9 111 aa9.76□□□□□ -0.85
SCFD1-211ENST00000554437 ESYT1Q9BSJ8 1104 aa9.76□□□□□ -0.85
SCFD1-211ENST00000554437 SERTAD1Q9UHV2 236 aa9.76□□□□□ -0.85
SCFD1-211ENST00000554437 NOVA2Q9UNW9 492 aaKnown RBP9.76□□□□□ -0.85
SCFD1-211ENST00000554437 SFI1A8K8P3 1242 aa9.75□□□□□ -0.85
SCFD1-211ENST00000554437 CTSOP43234 321 aaPredicted RBP9.75□□□□□ -0.85
SCFD1-211ENST00000554437 ZNF358Q9NW07 568 aa9.75□□□□□ -0.85
SCFD1-211ENST00000554437 WASLO00401 505 aaPredicted RBP9.74□□□□□ -0.85
SCFD1-211ENST00000554437 BACH1O14867 736 aa9.74□□□□□ -0.85
SCFD1-211ENST00000554437 SEC13P55735 322 aa9.74□□□□□ -0.85
SCFD1-211ENST00000554437 FAM200AQ8TCP9 573 aa9.74□□□□□ -0.85
SCFD1-211ENST00000554437 SENP2Q9HC62 589 aa9.74□□□□□ -0.85
SCFD1-211ENST00000554437 GMPR2Q9P2T1 348 aaKnown RBP9.74□□□□□ -0.85
SCFD1-211ENST00000554437 TTLL8A6PVC2 850 aa9.73□□□□□ -0.85
SCFD1-211ENST00000554437 DKK1O94907 266 aa9.73□□□□□ -0.85
SCFD1-211ENST00000554437 CENPCQ03188 943 aa9.73□□□□□ -0.85
SCFD1-211ENST00000554437 ELOAQ14241 798 aaKnown RBP9.73□□□□□ -0.85
SCFD1-211ENST00000554437 FIGNL2A6NMB9 653 aa9.72□□□□□ -0.85
SCFD1-211ENST00000554437 RNF144AP50876 292 aaPredicted RBP9.72□□□□□ -0.85
SCFD1-211ENST00000554437 TLR1Q15399 786 aa9.72□□□□□ -0.85
SCFD1-211ENST00000554437 SLC27A3Q5K4L6 730 aa9.72□□□□□ -0.85
SCFD1-211ENST00000554437 LCE2CQ5TA81 110 aa9.72□□□□□ -0.85
SCFD1-211ENST00000554437 ARXQ96QS3 562 aa9.72□□□□□ -0.85
SCFD1-211ENST00000554437 SOS2Q07890 1332 aaPredicted RBP9.72□□□□□ -0.85
SCFD1-211ENST00000554437 C11orf95C9JLR9 678 aaPredicted RBP9.71□□□□□ -0.86
SCFD1-211ENST00000554437 GPC1P35052 558 aa9.71□□□□□ -0.86
SCFD1-211ENST00000554437 SMTNP53814 917 aa9.71□□□□□ -0.86
SCFD1-211ENST00000554437 FOXD4L5Q5VV16 416 aaPredicted RBP9.71□□□□□ -0.86
SCFD1-211ENST00000554437 STK32AQ8WU08 396 aa9.71□□□□□ -0.86
SCFD1-211ENST00000554437 KIFC2Q96AC6 838 aa9.71□□□□□ -0.86
SCFD1-211ENST00000554437 SLC4A9Q96Q91 983 aa9.71□□□□□ -0.86
SCFD1-211ENST00000554437 ZMIZ1Q9ULJ6 1067 aa9.71□□□□□ -0.86
SCFD1-211ENST00000554437 HRH3Q9Y5N1 445 aa9.71□□□□□ -0.86
SCFD1-211ENST00000554437 MAN1A2O60476 641 aa9.7□□□□□ -0.86
SCFD1-211ENST00000554437 GTF2E1P29083 439 aaPredicted RBP9.7□□□□□ -0.86
SCFD1-211ENST00000554437 TSEN2Q8NCE0 465 aaKnown RBP9.7□□□□□ -0.86
SCFD1-211ENST00000554437 RNF217Q8TC41 542 aa9.7□□□□□ -0.86
SCFD1-211ENST00000554437 TRIM47Q96LD4 638 aa9.7□□□□□ -0.86
SCFD1-211ENST00000554437 ZSCAN10Q96SZ4 725 aaPredicted RBP9.7□□□□□ -0.86
SCFD1-211ENST00000554437 HINFPQ9BQA5 517 aa9.7□□□□□ -0.86
SCFD1-211ENST00000554437 A6NJY4 79 aa9.69□□□□□ -0.86
SCFD1-211ENST00000554437 M0R2N6 131 aa9.69□□□□□ -0.86
SCFD1-211ENST00000554437 CSB-PGBD3P0DP91 1061 aa9.69□□□□□ -0.86
SCFD1-211ENST00000554437 TNS4Q8IZW8 715 aa9.69□□□□□ -0.86
SCFD1-211ENST00000554437 FHDC1Q9C0D6 1143 aaPredicted RBP9.69□□□□□ -0.86
SCFD1-211ENST00000554437 GRIP2Q9C0E4 1043 aa9.69□□□□□ -0.86
SCFD1-211ENST00000554437 TMEM164Q5U3C3 297 aa9.68□□□□□ -0.86
SCFD1-211ENST00000554437 TMEM214Q6NUQ4 689 aaKnown RBP9.68□□□□□ -0.86
SCFD1-211ENST00000554437 LYSMD3Q7Z3D4 306 aa9.68□□□□□ -0.86
SCFD1-211ENST00000554437 PRICKLE2Q7Z3G6 844 aa9.68□□□□□ -0.86
SCFD1-211ENST00000554437 DNMT3LQ9UJW3 386 aa9.68□□□□□ -0.86
SCFD1-211ENST00000554437 SOBPA7XYQ1 873 aa9.67□□□□□ -0.86
SCFD1-211ENST00000554437 SNRPBP14678 240 aaKnown RBP9.67□□□□□ -0.86
SCFD1-211ENST00000554437 MTFR1Q15390 333 aa9.67□□□□□ -0.86
SCFD1-211ENST00000554437 LGR5O75473 907 aa9.66□□□□□ -0.86
SCFD1-211ENST00000554437 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.66□□□□□ -0.86
SCFD1-211ENST00000554437 CDK2AP1O14519 115 aa9.65□□□□□ -0.86
SCFD1-211ENST00000554437 GNASQ5JWF2 1037 aa9.65□□□□□ -0.86
SCFD1-211ENST00000554437 PPARGC1BQ86YN6 1023 aaKnown RBP9.65□□□□□ -0.86
SCFD1-211ENST00000554437 SCHIP1Q9P0W5 487 aaPredicted RBP9.65□□□□□ -0.86
SCFD1-211ENST00000554437 RHOQP17081 205 aa9.64□□□□□ -0.87
SCFD1-211ENST00000554437 EPHA4P54764 986 aa9.64□□□□□ -0.87
SCFD1-211ENST00000554437 POU4F2Q12837 409 aa9.64□□□□□ -0.87
SCFD1-211ENST00000554437 SWI5Q1ZZU3 235 aa9.64□□□□□ -0.87
SCFD1-211ENST00000554437 TBCELQ5QJ74 424 aa9.64□□□□□ -0.87
SCFD1-211ENST00000554437 NBPF15Q8N660 670 aa9.64□□□□□ -0.87
SCFD1-211ENST00000554437 TSPAN10Q9H1Z9 355 aaPredicted RBP9.64□□□□□ -0.87
SCFD1-211ENST00000554437 SLC9A9Q8IVB4 645 aa9.63□□□□□ -0.87
SCFD1-211ENST00000554437 RETREG2Q8NC44 543 aa9.63□□□□□ -0.87
SCFD1-211ENST00000554437 RHBDD1Q8TEB9 315 aa9.63□□□□□ -0.87
SCFD1-211ENST00000554437 IQSEC3Q9UPP2 1182 aaPredicted RBP9.63□□□□□ -0.87
SCFD1-211ENST00000554437 USP3Q9Y6I4 520 aa9.63□□□□□ -0.87
SCFD1-211ENST00000554437 SPATA31C2B4DYI2 1134 aa9.62□□□□□ -0.87
SCFD1-211ENST00000554437 PHKA2P46019 1235 aa9.62□□□□□ -0.87
SCFD1-211ENST00000554437 FOXK2Q01167 660 aa9.62□□□□□ -0.87
SCFD1-211ENST00000554437 FAM69CQ0P6D2 419 aa9.62□□□□□ -0.87
SCFD1-211ENST00000554437 NBPF10Q6P3W6 841 aaKnown RBP9.62□□□□□ -0.87
SCFD1-211ENST00000554437 TAS1R3Q7RTX0 852 aa9.62□□□□□ -0.87
SCFD1-211ENST00000554437 SCG3Q8WXD2 468 aaKnown RBP9.62□□□□□ -0.87
SCFD1-211ENST00000554437 NIFKQ9BYG3 293 aaKnown RBP9.62□□□□□ -0.87
SCFD1-211ENST00000554437 CABP1Q9NZU7 370 aa9.62□□□□□ -0.87
SCFD1-211ENST00000554437 CARNS1A5YM72 827 aa9.61□□□□□ -0.87
SCFD1-211ENST00000554437 C4orf17Q53FE4 359 aa9.61□□□□□ -0.87
SCFD1-211ENST00000554437 ATAD2Q6PL18 1390 aa9.61□□□□□ -0.87
SCFD1-211ENST00000554437 TMEM88BA6NKF7 163 aa9.6□□□□□ -0.87
SCFD1-211ENST00000554437 PRMT3O60678 531 aa9.6□□□□□ -0.87
SCFD1-211ENST00000554437 CHMP7Q8WUX9 453 aaPredicted RBP9.6□□□□□ -0.87
SCFD1-211ENST00000554437 PRIMPOLQ96LW4 560 aa9.6□□□□□ -0.87
SCFD1-211ENST00000554437 USTQ9Y2C2 406 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms