RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 NCLP19338 710 aaKnown RBP3.75□□□□□ -1.81
PRPF39-206ENST00000554429 VPS72Q15906 364 aa3.75□□□□□ -1.81
PRPF39-206ENST00000554429 USP21Q9UK80 565 aa3.75□□□□□ -1.81
PRPF39-206ENST00000554429 ABCC6O95255 1503 aa3.75□□□□□ -1.81
PRPF39-206ENST00000554429 PARD3Q8TEW0 1356 aa3.75□□□□□ -1.81
PRPF39-206ENST00000554429 MFAP1P55081 439 aaKnown RBP3.75□□□□□ -1.81
PRPF39-206ENST00000554429 UNC5CLQ8IV45 518 aa3.75□□□□□ -1.81
PRPF39-206ENST00000554429 TRIM52Q96A61 297 aa3.75□□□□□ -1.81
PRPF39-206ENST00000554429 GJD4Q96KN9 370 aaPredicted RBP3.75□□□□□ -1.81
PRPF39-206ENST00000554429 BCL2L12Q9HB09 334 aa3.75□□□□□ -1.81
PRPF39-206ENST00000554429 BRD4O60885 1362 aaPredicted RBP3.75□□□□□ -1.81
PRPF39-206ENST00000554429 C14orf93Q9H972 538 aaKnown RBP3.75□□□□□ -1.81
PRPF39-206ENST00000554429 QSER1Q2KHR3 1735 aa3.74□□□□□ -1.81
PRPF39-206ENST00000554429 CASZ1Q86V15 1759 aa3.74□□□□□ -1.81
PRPF39-206ENST00000554429 SBF2Q86WG5 1849 aa3.74□□□□□ -1.81
PRPF39-206ENST00000554429 C8orf37Q96NL8 207 aa3.74□□□□□ -1.81
PRPF39-206ENST00000554429 NRKQ7Z2Y5 1582 aa3.74□□□□□ -1.81
PRPF39-206ENST00000554429 CHGAP10645 457 aaKnown RBP3.74□□□□□ -1.81
PRPF39-206ENST00000554429 PKDCCQ504Y2 493 aa3.74□□□□□ -1.81
PRPF39-206ENST00000554429 TMCO4Q5TGY1 634 aa3.74□□□□□ -1.81
PRPF39-206ENST00000554429 ORAI2Q96SN7 254 aa3.74□□□□□ -1.81
PRPF39-206ENST00000554429 BCL9O00512 1426 aa3.73□□□□□ -1.81
PRPF39-206ENST00000554429 SOWAHBA6NEL2 793 aa3.73□□□□□ -1.81
PRPF39-206ENST00000554429 NUTM2BA6NNL0 878 aaPredicted RBP3.73□□□□□ -1.81
PRPF39-206ENST00000554429 NUTM2EB1AL46 878 aaPredicted RBP3.73□□□□□ -1.81
PRPF39-206ENST00000554429 NLRP6P59044 892 aa3.73□□□□□ -1.81
PRPF39-206ENST00000554429 NUTM2AQ8IVF1 878 aaPredicted RBP3.73□□□□□ -1.81
PRPF39-206ENST00000554429 CCDC82Q8N4S0 544 aa3.73□□□□□ -1.81
PRPF39-206ENST00000554429 ZBED2Q9BTP6 218 aa3.73□□□□□ -1.81
PRPF39-206ENST00000554429 GZF1Q9H116 711 aaPredicted RBP3.73□□□□□ -1.81
PRPF39-206ENST00000554429 TRPM1Q7Z4N2 1603 aa3.73□□□□□ -1.81
PRPF39-206ENST00000554429 CLSPNQ9HAW4 1339 aa3.73□□□□□ -1.81
PRPF39-206ENST00000554429 COL18A1P39060 1754 aa3.73□□□□□ -1.81
PRPF39-206ENST00000554429 PSME1Q06323 249 aa3.73□□□□□ -1.81
PRPF39-206ENST00000554429 CCDC27Q2M243 656 aa3.73□□□□□ -1.81
PRPF39-206ENST00000554429 NUTM2DQ5VT03 806 aaPredicted RBP3.73□□□□□ -1.81
PRPF39-206ENST00000554429 SALL2Q9Y467 1007 aaPredicted RBP3.73□□□□□ -1.81
PRPF39-206ENST00000554429 PTPREP23469 700 aa3.72□□□□□ -1.81
PRPF39-206ENST00000554429 KRTAP4-8Q9BYQ9 185 aa3.72□□□□□ -1.81
PRPF39-206ENST00000554429 ADGRF5Q8IZF2 1346 aa3.72□□□□□ -1.81
PRPF39-206ENST00000554429 DHX57Q6P158 1386 aaKnown RBP3.72□□□□□ -1.81
PRPF39-206ENST00000554429 PLEKHH1Q9ULM0 1364 aa3.72□□□□□ -1.81
PRPF39-206ENST00000554429 C2orf72A6NCS6 295 aa3.72□□□□□ -1.81
PRPF39-206ENST00000554429 PRR20EP86478 221 aa3.72□□□□□ -1.81
PRPF39-206ENST00000554429 PRR20CP86479 221 aa3.72□□□□□ -1.81
PRPF39-206ENST00000554429 PRR20DP86480 221 aa3.72□□□□□ -1.81
PRPF39-206ENST00000554429 PRR20BP86481 221 aa3.72□□□□□ -1.81
PRPF39-206ENST00000554429 PRR20AP86496 221 aa3.72□□□□□ -1.81
PRPF39-206ENST00000554429 DDX17Q92841 729 aaKnown RBP3.72□□□□□ -1.81
PRPF39-206ENST00000554429 MS4A4AQ96JQ5 239 aa3.72□□□□□ -1.81
PRPF39-206ENST00000554429 YTHDC1Q96MU7 727 aaKnown RBP3.72□□□□□ -1.81
PRPF39-206ENST00000554429 ANP32EQ9BTT0 268 aa3.72□□□□□ -1.81
PRPF39-206ENST00000554429 POLR3AO14802 1390 aaPredicted RBP3.72□□□□□ -1.81
PRPF39-206ENST00000554429 SLIT3O75094 1523 aa3.72□□□□□ -1.81
PRPF39-206ENST00000554429 QRICH2Q9H0J4 1663 aa3.72□□□□□ -1.81
PRPF39-206ENST00000554429 AKAP12Q02952 1782 aa3.72□□□□□ -1.81
PRPF39-206ENST00000554429 C11orf95C9JLR9 678 aaPredicted RBP3.72□□□□□ -1.81
PRPF39-206ENST00000554429 E9PSI1 815 aa3.72□□□□□ -1.81
PRPF39-206ENST00000554429 RGL2O15211 777 aa3.72□□□□□ -1.81
PRPF39-206ENST00000554429 CPDO75976 1380 aa3.72□□□□□ -1.81
PRPF39-206ENST00000554429 VASPP50552 380 aaPredicted RBP3.72□□□□□ -1.81
PRPF39-206ENST00000554429 LMOD2Q6P5Q4 547 aa3.72□□□□□ -1.81
PRPF39-206ENST00000554429 TEX2Q8IWB9 1127 aa3.72□□□□□ -1.81
PRPF39-206ENST00000554429 SLC24A3Q9HC58 644 aa3.72□□□□□ -1.81
PRPF39-206ENST00000554429 LRRC37A3O60309 1634 aa3.71□□□□□ -1.82
PRPF39-206ENST00000554429 TMC2Q8TDI7 906 aa3.71□□□□□ -1.82
PRPF39-206ENST00000554429 SPATA31A5Q5VU36 1347 aa3.71□□□□□ -1.82
PRPF39-206ENST00000554429 SPATA31A7Q8IWB4 1347 aa3.71□□□□□ -1.82
PRPF39-206ENST00000554429 ECM2O94769 699 aaPredicted RBP3.71□□□□□ -1.82
PRPF39-206ENST00000554429 DEKP35659 375 aaKnown RBP3.71□□□□□ -1.82
PRPF39-206ENST00000554429 GGCXP38435 758 aa3.71□□□□□ -1.82
PRPF39-206ENST00000554429 ESCO1Q5FWF5 840 aa3.71□□□□□ -1.82
PRPF39-206ENST00000554429 CC2D2BQ6DHV5 1058 aa3.71□□□□□ -1.82
PRPF39-206ENST00000554429 KRT28Q7Z3Y7 464 aa3.71□□□□□ -1.82
PRPF39-206ENST00000554429 PLCD4Q9BRC7 762 aa3.71□□□□□ -1.82
PRPF39-206ENST00000554429 PHF8Q9UPP1 1060 aa3.71□□□□□ -1.82
PRPF39-206ENST00000554429 ADAMTS2O95450 1211 aa3.7□□□□□ -1.82
PRPF39-206ENST00000554429 WWC1Q8IX03 1113 aa3.7□□□□□ -1.82
PRPF39-206ENST00000554429 EIF4ENIF1Q9NRA8 985 aaKnown RBP3.7□□□□□ -1.82
PRPF39-206ENST00000554429 PAPPAQ13219 1627 aa3.7□□□□□ -1.82
PRPF39-206ENST00000554429 AATKQ6ZMQ8 1374 aa3.7□□□□□ -1.82
PRPF39-206ENST00000554429 CAMTA1Q9Y6Y1 1673 aa3.7□□□□□ -1.82
PRPF39-206ENST00000554429 USP19O94966 1318 aa3.7□□□□□ -1.82
PRPF39-206ENST00000554429 BARGINQ6ZT62 677 aa3.7□□□□□ -1.82
PRPF39-206ENST00000554429 SEPT12Q8IYM1 358 aa3.7□□□□□ -1.82
PRPF39-206ENST00000554429 NFX1Q12986 1120 aaKnown RBP3.69□□□□□ -1.82
PRPF39-206ENST00000554429 KRT27Q7Z3Y8 459 aa3.69□□□□□ -1.82
PRPF39-206ENST00000554429 MPHOSPH9Q99550 1183 aa3.69□□□□□ -1.82
PRPF39-206ENST00000554429 TMUB1Q9BVT8 246 aa3.69□□□□□ -1.82
PRPF39-206ENST00000554429 MON2Q7Z3U7 1717 aa3.69□□□□□ -1.82
PRPF39-206ENST00000554429 NHSQ6T4R5 1651 aa3.69□□□□□ -1.82
PRPF39-206ENST00000554429 FAM208AQ9UK61 1670 aaKnown RBP3.69□□□□□ -1.82
PRPF39-206ENST00000554429 FAM43BQ6ZT52 329 aaPredicted RBP3.69□□□□□ -1.82
PRPF39-206ENST00000554429 RABGEF1Q9UJ41 708 aa3.69□□□□□ -1.82
PRPF39-206ENST00000554429 NAP1L2Q9ULW6 460 aaPredicted RBP3.69□□□□□ -1.82
PRPF39-206ENST00000554429 SSH2Q76I76 1423 aa3.69□□□□□ -1.82
PRPF39-206ENST00000554429 PITPNM2Q9BZ72 1349 aa3.69□□□□□ -1.82
PRPF39-206ENST00000554429 FAM83GA6ND36 823 aa3.69□□□□□ -1.82
PRPF39-206ENST00000554429 FOXO3O43524 673 aa3.69□□□□□ -1.82
PRPF39-206ENST00000554429 WAPLQ7Z5K2 1190 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms