RNA–Protein interactions for RNA: ENST00000554289.1

LIN52-203, Transcript of lin-52 DREAM MuvB core complex component, humanhuman

TSL 3

Gene LIN52, Length 271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN52-203ENST00000554289 ATP6V1AP38606 617 aa11.98□□□□□ -0.49
LIN52-203ENST00000554289 CABP4P57796 275 aa11.98□□□□□ -0.49
LIN52-203ENST00000554289 SCN11AQ9UI33 1791 aa11.97□□□□□ -0.49
LIN52-203ENST00000554289 SSFA2P28290 1259 aa11.97□□□□□ -0.49
LIN52-203ENST00000554289 AKAP4Q5JQC9 854 aa11.97□□□□□ -0.49
LIN52-203ENST00000554289 KDM6AO15550 1401 aaPredicted RBP11.96□□□□□ -0.49
LIN52-203ENST00000554289 VIRMAQ69YN4 1812 aaKnown RBP11.95□□□□□ -0.5
LIN52-203ENST00000554289 YY1P25490 414 aa11.95□□□□□ -0.5
LIN52-203ENST00000554289 ITPK1Q13572 414 aa11.95□□□□□ -0.5
LIN52-203ENST00000554289 LINC00116Q8NCU8 138 aa11.95□□□□□ -0.5
LIN52-203ENST00000554289 CHD4Q14839 1912 aa11.94□□□□□ -0.5
LIN52-203ENST00000554289 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.94□□□□□ -0.5
LIN52-203ENST00000554289 HMOX1P09601 288 aa11.94□□□□□ -0.5
LIN52-203ENST00000554289 RC3H1Q5TC82 1133 aaKnown RBP11.94□□□□□ -0.5
LIN52-203ENST00000554289 NFATC2IPQ8NCF5 419 aa11.94□□□□□ -0.5
LIN52-203ENST00000554289 RBM42Q9BTD8 480 aaKnown RBP11.94□□□□□ -0.5
LIN52-203ENST00000554289 COL5A3P25940 1745 aaPredicted RBP11.94□□□□□ -0.5
LIN52-203ENST00000554289 KLHL34Q8N239 644 aa11.93□□□□□ -0.5
LIN52-203ENST00000554289 COL3A1P02461 1466 aaPredicted RBP11.92□□□□□ -0.5
LIN52-203ENST00000554289 GNPATO15228 680 aa11.92□□□□□ -0.5
LIN52-203ENST00000554289 PHF14O94880 888 aa11.92□□□□□ -0.5
LIN52-203ENST00000554289 MSL1Q68DK7 614 aa11.92□□□□□ -0.5
LIN52-203ENST00000554289 CFAP53Q96M91 514 aa11.92□□□□□ -0.5
LIN52-203ENST00000554289 SLC4A9Q96Q91 983 aa11.92□□□□□ -0.5
LIN52-203ENST00000554289 RTCBQ9Y3I0 505 aaKnown RBP11.92□□□□□ -0.5
LIN52-203ENST00000554289 CD2APQ9Y5K6 639 aa11.92□□□□□ -0.5
LIN52-203ENST00000554289 CNTNAP4Q9C0A0 1308 aa11.91□□□□□ -0.5
LIN52-203ENST00000554289 ADAMTS7Q9UKP4 1686 aa11.91□□□□□ -0.5
LIN52-203ENST00000554289 CICQ96RK0 1608 aaPredicted RBP11.91□□□□□ -0.5
LIN52-203ENST00000554289 RNMTO43148 476 aaKnown RBP11.91□□□□□ -0.5
LIN52-203ENST00000554289 ADRA2BP18089 450 aa11.91□□□□□ -0.5
LIN52-203ENST00000554289 CNGB1Q14028 1251 aaPredicted RBP11.91□□□□□ -0.5
LIN52-203ENST00000554289 GPR162Q16538 588 aa11.91□□□□□ -0.5
LIN52-203ENST00000554289 MTHFSDQ2M296 383 aaKnown RBP11.91□□□□□ -0.5
LIN52-203ENST00000554289 TRAPPC3LQ5T215 181 aa11.91□□□□□ -0.5
LIN52-203ENST00000554289 AMIGO3Q86WK7 504 aa11.91□□□□□ -0.5
LIN52-203ENST00000554289 SLC52A2Q9HAB3 445 aa11.91□□□□□ -0.5
LIN52-203ENST00000554289 U2SURPO15042 1029 aaKnown RBP11.9□□□□□ -0.5
LIN52-203ENST00000554289 RPS6KA4O75676 772 aa11.9□□□□□ -0.5
LIN52-203ENST00000554289 LGR6Q9HBX8 967 aa11.9□□□□□ -0.5
LIN52-203ENST00000554289 NUDCQ9Y266 331 aa11.9□□□□□ -0.5
LIN52-203ENST00000554289 MYH14Q7Z406 1995 aaKnown RBP11.9□□□□□ -0.5
LIN52-203ENST00000554289 MRC1P22897 1456 aa11.89□□□□□ -0.51
LIN52-203ENST00000554289 PTCD1O75127 700 aaKnown RBP11.89□□□□□ -0.51
LIN52-203ENST00000554289 NLGN2Q8NFZ4 835 aa11.89□□□□□ -0.51
LIN52-203ENST00000554289 GAS2L2Q8NHY3 880 aa11.89□□□□□ -0.51
LIN52-203ENST00000554289 GRIN3BO60391 1043 aa11.88□□□□□ -0.51
LIN52-203ENST00000554289 SMIM5Q71RC9 77 aa11.88□□□□□ -0.51
LIN52-203ENST00000554289 NLGN1Q8N2Q7 840 aa11.88□□□□□ -0.51
LIN52-203ENST00000554289 ARHGEF1Q92888 912 aaKnown RBP11.88□□□□□ -0.51
LIN52-203ENST00000554289 TJP1Q07157 1748 aa11.88□□□□□ -0.51
LIN52-203ENST00000554289 GNAT3A8MTJ3 354 aa11.87□□□□□ -0.51
LIN52-203ENST00000554289 PPP2R1AP30153 589 aa11.87□□□□□ -0.51
LIN52-203ENST00000554289 RFC4P35249 363 aa11.87□□□□□ -0.51
LIN52-203ENST00000554289 CRKLP46109 303 aaKnown RBP11.86□□□□□ -0.51
LIN52-203ENST00000554289 PELP1Q8IZL8 1130 aaKnown RBP11.86□□□□□ -0.51
LIN52-203ENST00000554289 VSIG10Q8N0Z9 540 aa11.86□□□□□ -0.51
LIN52-203ENST00000554289 C4AP0C0L4 1744 aa11.86□□□□□ -0.51
LIN52-203ENST00000554289 UBR2Q8IWV8 1755 aa11.85□□□□□ -0.51
LIN52-203ENST00000554289 FCHSD2O94868 740 aa11.85□□□□□ -0.51
LIN52-203ENST00000554289 TEFQ10587 303 aa11.85□□□□□ -0.51
LIN52-203ENST00000554289 RSPH6AQ9H0K4 717 aa11.85□□□□□ -0.51
LIN52-203ENST00000554289 KIF13BQ9NQT8 1826 aa11.85□□□□□ -0.51
LIN52-203ENST00000554289 SIPA1L3O60292 1781 aaPredicted RBP11.84□□□□□ -0.51
LIN52-203ENST00000554289 MMP10P09238 476 aa11.84□□□□□ -0.51
LIN52-203ENST00000554289 GYS1P13807 737 aa11.84□□□□□ -0.51
LIN52-203ENST00000554289 PRKAR2BP31323 418 aa11.84□□□□□ -0.51
LIN52-203ENST00000554289 SLC39A6Q13433 755 aa11.84□□□□□ -0.51
LIN52-203ENST00000554289 INTS5Q6P9B9 1019 aaKnown RBP11.84□□□□□ -0.51
LIN52-203ENST00000554289 TTC5Q8N0Z6 440 aa11.84□□□□□ -0.51
LIN52-203ENST00000554289 IL17REQ8NFR9 667 aa11.84□□□□□ -0.51
LIN52-203ENST00000554289 KCPQ6ZWJ8 1503 aa11.83□□□□□ -0.52
LIN52-203ENST00000554289 U2AF1L5P0DN76 240 aaPredicted RBP11.83□□□□□ -0.52
LIN52-203ENST00000554289 CYP19A1P11511 503 aaPredicted RBP11.83□□□□□ -0.52
LIN52-203ENST00000554289 U2AF1Q01081 240 aaKnown RBP eCLIP11.83□□□□□ -0.52
LIN52-203ENST00000554289 DNAJC10Q8IXB1 793 aa11.83□□□□□ -0.52
LIN52-203ENST00000554289 TEX13AQ9BXU3 409 aaPredicted RBP11.83□□□□□ -0.52
LIN52-203ENST00000554289 CCDC87Q9NVE4 849 aa11.83□□□□□ -0.52
LIN52-203ENST00000554289 CEMIPQ8WUJ3 1361 aa11.82□□□□□ -0.52
LIN52-203ENST00000554289 YBX3P16989 372 aaKnown RBP eCLIP11.82□□□□□ -0.52
LIN52-203ENST00000554289 TGFB2P61812 414 aa11.82□□□□□ -0.52
LIN52-203ENST00000554289 ZNF784Q8NCA9 323 aaPredicted RBP11.82□□□□□ -0.52
LIN52-203ENST00000554289 PHACTR3Q96KR7 559 aa11.82□□□□□ -0.52
LIN52-203ENST00000554289 PARP3Q9Y6F1 533 aa11.82□□□□□ -0.52
LIN52-203ENST00000554289 USP42Q9H9J4 1324 aaKnown RBP11.82□□□□□ -0.52
LIN52-203ENST00000554289 HTATSF1O43719 755 aaKnown RBP11.81□□□□□ -0.52
LIN52-203ENST00000554289 STARD3NLO95772 234 aa11.81□□□□□ -0.52
LIN52-203ENST00000554289 ZNF790Q6PG37 636 aa11.81□□□□□ -0.52
LIN52-203ENST00000554289 SOS1Q07889 1333 aaPredicted RBP11.81□□□□□ -0.52
LIN52-203ENST00000554289 ZPR1O75312 459 aa11.8□□□□□ -0.52
LIN52-203ENST00000554289 NEFMP07197 916 aa11.8□□□□□ -0.52
LIN52-203ENST00000554289 RTF1Q92541 710 aaKnown RBP11.8□□□□□ -0.52
LIN52-203ENST00000554289 HEG1Q9ULI3 1381 aa11.79□□□□□ -0.52
LIN52-203ENST00000554289 BTBD11A6QL63 1104 aa11.79□□□□□ -0.52
LIN52-203ENST00000554289 ZNF496Q96IT1 587 aaPredicted RBP11.79□□□□□ -0.52
LIN52-203ENST00000554289 FMNL2Q96PY5 1086 aa11.79□□□□□ -0.52
LIN52-203ENST00000554289 PNNQ9H307 717 aaKnown RBP11.79□□□□□ -0.52
LIN52-203ENST00000554289 NARFQ9UHQ1 456 aa11.79□□□□□ -0.52
LIN52-203ENST00000554289 N4BP2Q86UW6 1770 aaPredicted RBP11.79□□□□□ -0.52
LIN52-203ENST00000554289 COL15A1P39059 1388 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms