RNA–Protein interactions for RNA: ENST00000554214.5

ATXN3-225, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-225ENST00000554214 PALM3A6NDB9 673 aaPredicted RBP9.8□□□□□ -0.84
ATXN3-225ENST00000554214 TMEM229AB2RXF0 380 aa9.8□□□□□ -0.84
ATXN3-225ENST00000554214 ITGA6P23229 1130 aa9.8□□□□□ -0.84
ATXN3-225ENST00000554214 TLR1Q15399 786 aa9.8□□□□□ -0.84
ATXN3-225ENST00000554214 WDR44Q5JSH3 913 aa9.8□□□□□ -0.84
ATXN3-225ENST00000554214 TAS1R3Q7RTX0 852 aa9.8□□□□□ -0.84
ATXN3-225ENST00000554214 WASLO00401 505 aaPredicted RBP9.79□□□□□ -0.84
ATXN3-225ENST00000554214 PHKA2P46019 1235 aa9.79□□□□□ -0.84
ATXN3-225ENST00000554214 GNASQ5JWF2 1037 aa9.79□□□□□ -0.84
ATXN3-225ENST00000554214 VWA5B2Q8N398 1253 aa9.79□□□□□ -0.84
ATXN3-225ENST00000554214 TIMMDC1Q9NPL8 285 aa9.79□□□□□ -0.84
ATXN3-225ENST00000554214 ZBTB7BO15156 539 aaPredicted RBP9.78□□□□□ -0.84
ATXN3-225ENST00000554214 VSIG8P0DPA2 414 aa9.78□□□□□ -0.84
ATXN3-225ENST00000554214 SMTNP53814 917 aa9.78□□□□□ -0.84
ATXN3-225ENST00000554214 PPARGC1BQ86YN6 1023 aaKnown RBP9.78□□□□□ -0.84
ATXN3-225ENST00000554214 NANOS1Q8WY41 292 aaKnown RBP9.78□□□□□ -0.84
ATXN3-225ENST00000554214 SLC4A9Q96Q91 983 aa9.78□□□□□ -0.84
ATXN3-225ENST00000554214 GAS2L1Q99501 681 aaPredicted RBP9.78□□□□□ -0.84
ATXN3-225ENST00000554214 DYRK1BQ9Y463 629 aa9.78□□□□□ -0.84
ATXN3-225ENST00000554214 MAFBQ9Y5Q3 323 aaPredicted RBP9.78□□□□□ -0.84
ATXN3-225ENST00000554214 ATP1A2P50993 1020 aa9.77□□□□□ -0.85
ATXN3-225ENST00000554214 OGFOD1Q8N543 542 aa9.77□□□□□ -0.85
ATXN3-225ENST00000554214 GPR161Q8N6U8 529 aaKnown RBP9.77□□□□□ -0.85
ATXN3-225ENST00000554214 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.77□□□□□ -0.85
ATXN3-225ENST00000554214 CDC14CA4D256 554 aa9.76□□□□□ -0.85
ATXN3-225ENST00000554214 BACH1O14867 736 aa9.76□□□□□ -0.85
ATXN3-225ENST00000554214 WIPF1O43516 503 aa9.76□□□□□ -0.85
ATXN3-225ENST00000554214 LMOD1P29536 600 aaPredicted RBP9.76□□□□□ -0.85
ATXN3-225ENST00000554214 CLDN10P78369 228 aa9.76□□□□□ -0.85
ATXN3-225ENST00000554214 C4orf17Q53FE4 359 aa9.76□□□□□ -0.85
ATXN3-225ENST00000554214 CCDC102BQ68D86 513 aa9.76□□□□□ -0.85
ATXN3-225ENST00000554214 RIPOR1Q6ZS17 1223 aa9.76□□□□□ -0.85
ATXN3-225ENST00000554214 SV2AQ7L0J3 742 aa9.76□□□□□ -0.85
ATXN3-225ENST00000554214 DNAAF2Q9NVR5 837 aaKnown RBP9.76□□□□□ -0.85
ATXN3-225ENST00000554214 CUEDC1Q9NWM3 386 aaPredicted RBP9.76□□□□□ -0.85
ATXN3-225ENST00000554214 A6NJY4 79 aa9.75□□□□□ -0.85
ATXN3-225ENST00000554214 RHBDD1Q8TEB9 315 aa9.75□□□□□ -0.85
ATXN3-225ENST00000554214 ZNF358Q9NW07 568 aa9.75□□□□□ -0.85
ATXN3-225ENST00000554214 KIAA1024Q9UPX6 916 aa9.75□□□□□ -0.85
ATXN3-225ENST00000554214 CDK2AP1O14519 115 aa9.74□□□□□ -0.85
ATXN3-225ENST00000554214 F11P03951 625 aa9.74□□□□□ -0.85
ATXN3-225ENST00000554214 RASA1P20936 1047 aa9.74□□□□□ -0.85
ATXN3-225ENST00000554214 LARGE2Q8N3Y3 721 aa9.74□□□□□ -0.85
ATXN3-225ENST00000554214 TPCN2Q8NHX9 752 aa9.74□□□□□ -0.85
ATXN3-225ENST00000554214 DBN1Q16643 649 aa9.73□□□□□ -0.85
ATXN3-225ENST00000554214 NIFKQ9BYG3 293 aaKnown RBP9.73□□□□□ -0.85
ATXN3-225ENST00000554214 MTFR1Q15390 333 aa9.72□□□□□ -0.85
ATXN3-225ENST00000554214 KANK4Q5T7N3 995 aaPredicted RBP9.72□□□□□ -0.85
ATXN3-225ENST00000554214 TRIM22Q8IYM9 498 aa9.72□□□□□ -0.85
ATXN3-225ENST00000554214 ZNF594Q96JF6 807 aaPredicted RBP9.72□□□□□ -0.85
ATXN3-225ENST00000554214 VRTNQ9H8Y1 702 aa9.72□□□□□ -0.85
ATXN3-225ENST00000554214 RBM19Q9Y4C8 960 aaKnown RBP9.72□□□□□ -0.85
ATXN3-225ENST00000554214 A0A1B0GTH6 734 aa9.71□□□□□ -0.86
ATXN3-225ENST00000554214 H7C1W4 665 aa9.71□□□□□ -0.86
ATXN3-225ENST00000554214 LARP1Q6PKG0 1096 aaKnown RBP9.71□□□□□ -0.86
ATXN3-225ENST00000554214 TNS4Q8IZW8 715 aa9.71□□□□□ -0.86
ATXN3-225ENST00000554214 GMCL1Q96IK5 515 aa9.71□□□□□ -0.86
ATXN3-225ENST00000554214 GPAMQ9HCL2 828 aa9.71□□□□□ -0.86
ATXN3-225ENST00000554214 INSM1Q01101 510 aaPredicted RBP9.7□□□□□ -0.86
ATXN3-225ENST00000554214 CFAP70Q5T0N1 1121 aa9.7□□□□□ -0.86
ATXN3-225ENST00000554214 C14orf37Q86TY3 774 aa9.7□□□□□ -0.86
ATXN3-225ENST00000554214 AIDAQ96BJ3 306 aa9.7□□□□□ -0.86
ATXN3-225ENST00000554214 COL25A1Q9BXS0 654 aaPredicted RBP9.7□□□□□ -0.86
ATXN3-225ENST00000554214 IQSEC3Q9UPP2 1182 aaPredicted RBP9.7□□□□□ -0.86
ATXN3-225ENST00000554214 SFI1A8K8P3 1242 aa9.69□□□□□ -0.86
ATXN3-225ENST00000554214 RFX1P22670 979 aa9.69□□□□□ -0.86
ATXN3-225ENST00000554214 MSX1P28360 303 aa9.69□□□□□ -0.86
ATXN3-225ENST00000554214 PLA2G4AP47712 749 aa9.69□□□□□ -0.86
ATXN3-225ENST00000554214 CABP1Q9NZU7 370 aa9.69□□□□□ -0.86
ATXN3-225ENST00000554214 SCHIP1Q9P0W5 487 aaPredicted RBP9.69□□□□□ -0.86
ATXN3-225ENST00000554214 USP3Q9Y6I4 520 aa9.69□□□□□ -0.86
ATXN3-225ENST00000554214 DKK1O94907 266 aa9.68□□□□□ -0.86
ATXN3-225ENST00000554214 CDCA8Q53HL2 280 aa9.68□□□□□ -0.86
ATXN3-225ENST00000554214 FOXR1Q6PIV2 292 aa9.68□□□□□ -0.86
ATXN3-225ENST00000554214 SIX5Q8N196 739 aa9.68□□□□□ -0.86
ATXN3-225ENST00000554214 ZNF837Q96EG3 531 aaPredicted RBP9.68□□□□□ -0.86
ATXN3-225ENST00000554214 CNTNAP3BQ96NU0 1288 aa9.68□□□□□ -0.86
ATXN3-225ENST00000554214 CNTNAP3Q9BZ76 1288 aa9.68□□□□□ -0.86
ATXN3-225ENST00000554214 EPHA4P54764 986 aa9.67□□□□□ -0.86
ATXN3-225ENST00000554214 CRTC2Q53ET0 693 aaPredicted RBP9.67□□□□□ -0.86
ATXN3-225ENST00000554214 GTPBP3Q969Y2 492 aaKnown RBP9.67□□□□□ -0.86
ATXN3-225ENST00000554214 PARP3Q9Y6F1 533 aa9.67□□□□□ -0.86
ATXN3-225ENST00000554214 ARID3CA6NKF2 412 aa9.66□□□□□ -0.86
ATXN3-225ENST00000554214 CSB-PGBD3P0DP91 1061 aa9.66□□□□□ -0.86
ATXN3-225ENST00000554214 FOXK2Q01167 660 aa9.66□□□□□ -0.86
ATXN3-225ENST00000554214 KRT76Q01546 638 aa9.66□□□□□ -0.86
ATXN3-225ENST00000554214 PTK7Q13308 1070 aa9.66□□□□□ -0.86
ATXN3-225ENST00000554214 RNFT1Q5M7Z0 435 aa9.66□□□□□ -0.86
ATXN3-225ENST00000554214 TBCELQ5QJ74 424 aa9.66□□□□□ -0.86
ATXN3-225ENST00000554214 SLC9A9Q8IVB4 645 aa9.66□□□□□ -0.86
ATXN3-225ENST00000554214 ZNF295-AS1Q8N0V1 137 aa9.66□□□□□ -0.86
ATXN3-225ENST00000554214 PGBD3Q8N328 593 aa9.66□□□□□ -0.86
ATXN3-225ENST00000554214 NUCKS1Q9H1E3 243 aaKnown RBP9.66□□□□□ -0.86
ATXN3-225ENST00000554214 RUBCNLQ9H714 662 aa9.66□□□□□ -0.86
ATXN3-225ENST00000554214 M0R2N6 131 aa9.65□□□□□ -0.86
ATXN3-225ENST00000554214 SEC13P55735 322 aa9.65□□□□□ -0.86
ATXN3-225ENST00000554214 TSEN2Q8NCE0 465 aaKnown RBP9.65□□□□□ -0.86
ATXN3-225ENST00000554214 GPR25O00155 361 aa9.64□□□□□ -0.87
ATXN3-225ENST00000554214 DPYDQ12882 1025 aa9.64□□□□□ -0.87
ATXN3-225ENST00000554214 ANKMY2Q8IV38 441 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 124.8 ms