RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 HOXB7P09629 217 aa9.86□□□□□ -0.83
TDP1-209ENST00000554180 BRPF1P55201 1214 aaPredicted RBP9.86□□□□□ -0.83
TDP1-209ENST00000554180 TWISTNBQ3B726 338 aaPredicted RBP9.86□□□□□ -0.83
TDP1-209ENST00000554180 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.86□□□□□ -0.83
TDP1-209ENST00000554180 DDX54Q8TDD1 881 aaKnown RBP9.86□□□□□ -0.83
TDP1-209ENST00000554180 GJD4Q96KN9 370 aaPredicted RBP9.86□□□□□ -0.83
TDP1-209ENST00000554180 CHMP4AQ9BY43 222 aa9.86□□□□□ -0.83
TDP1-209ENST00000554180 SIPA1L3O60292 1781 aaPredicted RBP9.86□□□□□ -0.83
TDP1-209ENST00000554180 KDM3BQ7LBC6 1761 aa9.86□□□□□ -0.83
TDP1-209ENST00000554180 GLI3P10071 1580 aa9.85□□□□□ -0.83
TDP1-209ENST00000554180 ONECUT3O60422 494 aaPredicted RBP9.85□□□□□ -0.83
TDP1-209ENST00000554180 VAMP4O75379 141 aa9.85□□□□□ -0.83
TDP1-209ENST00000554180 CABP4P57796 275 aa9.85□□□□□ -0.83
TDP1-209ENST00000554180 ZNF772Q68DY9 489 aaPredicted RBP9.85□□□□□ -0.83
TDP1-209ENST00000554180 KIF16BQ96L93 1317 aa9.84□□□□□ -0.83
TDP1-209ENST00000554180 EIF4A1P60842 406 aaKnown RBP9.84□□□□□ -0.83
TDP1-209ENST00000554180 FAM98CQ17RN3 349 aaKnown RBP9.84□□□□□ -0.83
TDP1-209ENST00000554180 C8orf58Q8NAV2 365 aa9.84□□□□□ -0.83
TDP1-209ENST00000554180 NFATC2IPQ8NCF5 419 aa9.84□□□□□ -0.83
TDP1-209ENST00000554180 MIS18AQ9NYP9 233 aa9.84□□□□□ -0.83
TDP1-209ENST00000554180 HEG1Q9ULI3 1381 aa9.84□□□□□ -0.83
TDP1-209ENST00000554180 BCL9O00512 1426 aa9.83□□□□□ -0.84
TDP1-209ENST00000554180 ERICH6BQ5W0A0 696 aa9.83□□□□□ -0.84
TDP1-209ENST00000554180 ZNF790Q6PG37 636 aa9.83□□□□□ -0.84
TDP1-209ENST00000554180 TSPYL6Q8N831 410 aa9.83□□□□□ -0.84
TDP1-209ENST00000554180 SMC4Q9NTJ3 1288 aa9.83□□□□□ -0.84
TDP1-209ENST00000554180 VIRMAQ69YN4 1812 aaKnown RBP9.83□□□□□ -0.84
TDP1-209ENST00000554180 TOGARAM1Q9Y4F4 1720 aa9.82□□□□□ -0.84
TDP1-209ENST00000554180 BCAR3O75815 825 aa9.82□□□□□ -0.84
TDP1-209ENST00000554180 TTC5Q8N0Z6 440 aa9.82□□□□□ -0.84
TDP1-209ENST00000554180 MARCH10Q8NA82 808 aaPredicted RBP9.82□□□□□ -0.84
TDP1-209ENST00000554180 SSH1Q8WYL5 1049 aa9.82□□□□□ -0.84
TDP1-209ENST00000554180 QTRT2Q9H974 415 aaKnown RBP9.82□□□□□ -0.84
TDP1-209ENST00000554180 TMOD3Q9NYL9 352 aa9.82□□□□□ -0.84
TDP1-209ENST00000554180 PAPPAQ13219 1627 aa9.82□□□□□ -0.84
TDP1-209ENST00000554180 MS4A1P11836 297 aa9.81□□□□□ -0.84
TDP1-209ENST00000554180 PDE3AQ14432 1141 aa9.81□□□□□ -0.84
TDP1-209ENST00000554180 ELL2O00472 640 aaPredicted RBP9.8□□□□□ -0.84
TDP1-209ENST00000554180 IPO8O15397 1037 aaKnown RBP9.8□□□□□ -0.84
TDP1-209ENST00000554180 GIGYF1O75420 1035 aaPredicted RBP9.8□□□□□ -0.84
TDP1-209ENST00000554180 RBM6P78332 1123 aaKnown RBP9.8□□□□□ -0.84
TDP1-209ENST00000554180 KRT24Q2M2I5 525 aa9.8□□□□□ -0.84
TDP1-209ENST00000554180 CCDC30Q5VVM6 783 aa9.8□□□□□ -0.84
TDP1-209ENST00000554180 ARHGAP45Q92619 1136 aa9.8□□□□□ -0.84
TDP1-209ENST00000554180 FMNL2Q96PY5 1086 aa9.8□□□□□ -0.84
TDP1-209ENST00000554180 GTF3C3Q9Y5Q9 886 aa9.8□□□□□ -0.84
TDP1-209ENST00000554180 UBR2Q8IWV8 1755 aa9.79□□□□□ -0.84
TDP1-209ENST00000554180 KCPQ6ZWJ8 1503 aa9.79□□□□□ -0.84
TDP1-209ENST00000554180 A0A0G2JS52 829 aa9.79□□□□□ -0.84
TDP1-209ENST00000554180 KCNQ3O43525 872 aa9.79□□□□□ -0.84
TDP1-209ENST00000554180 CANXP27824 592 aaKnown RBP9.79□□□□□ -0.84
TDP1-209ENST00000554180 MYT1Q01538 1121 aa9.79□□□□□ -0.84
TDP1-209ENST00000554180 HDGFL1Q5TGJ6 251 aa9.79□□□□□ -0.84
TDP1-209ENST00000554180 ZKSCAN2Q63HK3 967 aa9.79□□□□□ -0.84
TDP1-209ENST00000554180 SEPT12Q8IYM1 358 aa9.79□□□□□ -0.84
TDP1-209ENST00000554180 MRPL50Q8N5N7 158 aaKnown RBP9.79□□□□□ -0.84
TDP1-209ENST00000554180 PIGBQ92521 554 aa9.79□□□□□ -0.84
TDP1-209ENST00000554180 BCL2L13Q9BXK5 485 aa9.79□□□□□ -0.84
TDP1-209ENST00000554180 STK31Q9BXU1 1019 aa9.79□□□□□ -0.84
TDP1-209ENST00000554180 PTPRCP08575 1304 aa9.79□□□□□ -0.84
TDP1-209ENST00000554180 SNRPA1P09661 255 aaKnown RBP9.78□□□□□ -0.84
TDP1-209ENST00000554180 SLC39A6Q13433 755 aa9.78□□□□□ -0.84
TDP1-209ENST00000554180 FKBP8Q14318 412 aa9.78□□□□□ -0.84
TDP1-209ENST00000554180 ATF7IPQ6VMQ6 1270 aa9.78□□□□□ -0.84
TDP1-209ENST00000554180 VSIG10Q8N0Z9 540 aa9.78□□□□□ -0.84
TDP1-209ENST00000554180 ZNF496Q96IT1 587 aaPredicted RBP9.78□□□□□ -0.84
TDP1-209ENST00000554180 DOT1LQ8TEK3 1739 aa9.78□□□□□ -0.84
TDP1-209ENST00000554180 PLIN1O60240 522 aa9.77□□□□□ -0.85
TDP1-209ENST00000554180 PRIM1P49642 420 aaKnown RBP9.77□□□□□ -0.85
TDP1-209ENST00000554180 FRAT1Q92837 279 aaPredicted RBP9.77□□□□□ -0.85
TDP1-209ENST00000554180 API5Q9BZZ5 524 aaKnown RBP9.77□□□□□ -0.85
TDP1-209ENST00000554180 ERBB4Q15303 1308 aa9.77□□□□□ -0.85
TDP1-209ENST00000554180 SLC4A2P04920 1241 aa9.76□□□□□ -0.85
TDP1-209ENST00000554180 TRIM27P14373 513 aa9.76□□□□□ -0.85
TDP1-209ENST00000554180 AAMPQ13685 434 aa9.76□□□□□ -0.85
TDP1-209ENST00000554180 FTSJ3Q8IY81 847 aaKnown RBP9.76□□□□□ -0.85
TDP1-209ENST00000554180 DZIP1LQ8IYY4 767 aaKnown RBP9.76□□□□□ -0.85
TDP1-209ENST00000554180 SMARCC1Q92922 1105 aaPredicted RBP9.76□□□□□ -0.85
TDP1-209ENST00000554180 SYTL4Q96C24 671 aaPredicted RBP9.76□□□□□ -0.85
TDP1-209ENST00000554180 TEX13AQ9BXU3 409 aaPredicted RBP9.76□□□□□ -0.85
TDP1-209ENST00000554180 ATG3Q9NT62 314 aa9.76□□□□□ -0.85
TDP1-209ENST00000554180 DBF4Q9UBU7 674 aaPredicted RBP9.76□□□□□ -0.85
TDP1-209ENST00000554180 NOB1Q9ULX3 412 aaKnown RBP9.76□□□□□ -0.85
TDP1-209ENST00000554180 ITGB4P16144 1822 aa9.76□□□□□ -0.85
TDP1-209ENST00000554180 ASAP1Q9ULH1 1129 aa9.75□□□□□ -0.85
TDP1-209ENST00000554180 ABCC4O15439 1325 aa9.75□□□□□ -0.85
TDP1-209ENST00000554180 LAMB4A4D0S4 1761 aa9.75□□□□□ -0.85
TDP1-209ENST00000554180 CICQ96RK0 1608 aaPredicted RBP9.74□□□□□ -0.85
TDP1-209ENST00000554180 RGS12O14924 1447 aa9.74□□□□□ -0.85
TDP1-209ENST00000554180 NHSQ6T4R5 1651 aa9.74□□□□□ -0.85
TDP1-209ENST00000554180 CACNA1FO60840 1977 aa9.74□□□□□ -0.85
TDP1-209ENST00000554180 EIF2S2P20042 333 aaKnown RBP9.74□□□□□ -0.85
TDP1-209ENST00000554180 RXRBP28702 533 aa9.74□□□□□ -0.85
TDP1-209ENST00000554180 IRX6P78412 446 aaPredicted RBP9.74□□□□□ -0.85
TDP1-209ENST00000554180 FLIIQ13045 1269 aa9.74□□□□□ -0.85
TDP1-209ENST00000554180 C20orf194Q5TEA3 1177 aa9.74□□□□□ -0.85
TDP1-209ENST00000554180 KRT27Q7Z3Y8 459 aa9.74□□□□□ -0.85
TDP1-209ENST00000554180 DDX21Q9NR30 783 aaKnown RBP eCLIP9.74□□□□□ -0.85
TDP1-209ENST00000554180 HYPKQ9NX55 129 aa9.74□□□□□ -0.85
TDP1-209ENST00000554180 CHPF2Q9P2E5 772 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms