RNA–Protein interactions for RNA: ENST00000554057.5

MTHFD1-205, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-205ENST00000554057 GPBP1L1Q9HC44 474 aaPredicted RBP9.51□□□□□ -0.89
MTHFD1-205ENST00000554057 EMILIN1Q9Y6C2 1016 aa9.51□□□□□ -0.89
MTHFD1-205ENST00000554057 MAP2P11137 1827 aaKnown RBP9.51□□□□□ -0.89
MTHFD1-205ENST00000554057 IGSF1Q8N6C5 1336 aa9.51□□□□□ -0.89
MTHFD1-205ENST00000554057 CEP350Q5VT06 3117 aa9.5□□□□□ -0.89
MTHFD1-205ENST00000554057 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.5□□□□□ -0.89
MTHFD1-205ENST00000554057 RALBP1Q15311 655 aa9.5□□□□□ -0.89
MTHFD1-205ENST00000554057 IFFO2Q5TF58 517 aa9.5□□□□□ -0.89
MTHFD1-205ENST00000554057 NCAPD2Q15021 1401 aa9.49□□□□□ -0.89
MTHFD1-205ENST00000554057 NSD3Q9BZ95 1437 aa9.49□□□□□ -0.89
MTHFD1-205ENST00000554057 TMF1P82094 1093 aa9.49□□□□□ -0.89
MTHFD1-205ENST00000554057 LINC00116Q8NCU8 138 aa9.49□□□□□ -0.89
MTHFD1-205ENST00000554057 PIGBQ92521 554 aa9.49□□□□□ -0.89
MTHFD1-205ENST00000554057 SMARCC1Q92922 1105 aaPredicted RBP9.49□□□□□ -0.89
MTHFD1-205ENST00000554057 KIF24Q5T7B8 1368 aa9.49□□□□□ -0.89
MTHFD1-205ENST00000554057 SLC24A1O60721 1099 aa9.48□□□□□ -0.89
MTHFD1-205ENST00000554057 IRX6P78412 446 aaPredicted RBP9.48□□□□□ -0.89
MTHFD1-205ENST00000554057 PNISRQ8TF01 805 aaKnown RBP9.48□□□□□ -0.89
MTHFD1-205ENST00000554057 CICQ96RK0 1608 aaPredicted RBP9.47□□□□□ -0.89
MTHFD1-205ENST00000554057 LOC102724428A0A0B4J2F2 783 aa9.47□□□□□ -0.89
MTHFD1-205ENST00000554057 GNPATO15228 680 aa9.47□□□□□ -0.89
MTHFD1-205ENST00000554057 PPM1GO15355 546 aaPredicted RBP9.47□□□□□ -0.89
MTHFD1-205ENST00000554057 HSPA6P17066 643 aa9.47□□□□□ -0.89
MTHFD1-205ENST00000554057 SSFA2P28290 1259 aa9.47□□□□□ -0.89
MTHFD1-205ENST00000554057 SIK1P57059 783 aa9.47□□□□□ -0.89
MTHFD1-205ENST00000554057 ITPK1Q13572 414 aa9.47□□□□□ -0.89
MTHFD1-205ENST00000554057 MYBBP1AQ9BQG0 1328 aaKnown RBP9.47□□□□□ -0.89
MTHFD1-205ENST00000554057 KIAA1551Q9HCM1 1747 aa9.46□□□□□ -0.89
MTHFD1-205ENST00000554057 HMGB2P26583 209 aaKnown RBP9.46□□□□□ -0.9
MTHFD1-205ENST00000554057 CARD14Q9BXL6 1004 aa9.46□□□□□ -0.9
MTHFD1-205ENST00000554057 TMOD3Q9NYL9 352 aa9.46□□□□□ -0.9
MTHFD1-205ENST00000554057 ASAP1Q9ULH1 1129 aa9.46□□□□□ -0.9
MTHFD1-205ENST00000554057 VIRMAQ69YN4 1812 aaKnown RBP9.46□□□□□ -0.9
MTHFD1-205ENST00000554057 PXDNLA1KZ92 1463 aa9.46□□□□□ -0.9
MTHFD1-205ENST00000554057 N4BP2Q86UW6 1770 aaPredicted RBP9.45□□□□□ -0.9
MTHFD1-205ENST00000554057 KIF3CO14782 793 aa9.45□□□□□ -0.9
MTHFD1-205ENST00000554057 MMP10P09238 476 aa9.45□□□□□ -0.9
MTHFD1-205ENST00000554057 NKX1-1Q15270 411 aaPredicted RBP9.45□□□□□ -0.9
MTHFD1-205ENST00000554057 SPG7Q9UQ90 795 aa9.45□□□□□ -0.9
MTHFD1-205ENST00000554057 KIF13BQ9NQT8 1826 aa9.45□□□□□ -0.9
MTHFD1-205ENST00000554057 ATP6V1AP38606 617 aa9.44□□□□□ -0.9
MTHFD1-205ENST00000554057 CDCA8Q53HL2 280 aa9.44□□□□□ -0.9
MTHFD1-205ENST00000554057 B4GALNT3Q6L9W6 998 aa9.44□□□□□ -0.9
MTHFD1-205ENST00000554057 EYA1Q99502 592 aa9.44□□□□□ -0.9
MTHFD1-205ENST00000554057 KDRP35968 1356 aa9.44□□□□□ -0.9
MTHFD1-205ENST00000554057 C10orf71Q711Q0 1435 aa9.43□□□□□ -0.9
MTHFD1-205ENST00000554057 PHKG2P15735 406 aa9.43□□□□□ -0.9
MTHFD1-205ENST00000554057 ATG3Q9NT62 314 aa9.43□□□□□ -0.9
MTHFD1-205ENST00000554057 COL5A3P25940 1745 aaPredicted RBP9.42□□□□□ -0.9
MTHFD1-205ENST00000554057 IFNL2Q8IZJ0 200 aa9.42□□□□□ -0.9
MTHFD1-205ENST00000554057 CCDC136Q96JN2 1154 aa9.42□□□□□ -0.9
MTHFD1-205ENST00000554057 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.42□□□□□ -0.96e-8■■■□□ 15
MTHFD1-205ENST00000554057 BCS1LQ9Y276 419 aa9.42□□□□□ -0.9
MTHFD1-205ENST00000554057 C4AP0C0L4 1744 aa9.42□□□□□ -0.9
MTHFD1-205ENST00000554057 BRCA1P38398 1863 aaKnown RBP9.41□□□□□ -0.9
MTHFD1-205ENST00000554057 EIF4A2Q14240 407 aaKnown RBP9.41□□□□□ -0.9
MTHFD1-205ENST00000554057 SLC4A9Q96Q91 983 aa9.41□□□□□ -0.9
MTHFD1-205ENST00000554057 RBM42Q9BTD8 480 aaKnown RBP9.41□□□□□ -0.9
MTHFD1-205ENST00000554057 POLKQ9UBT6 870 aa9.41□□□□□ -0.9
MTHFD1-205ENST00000554057 A0A0G2JLW4 131 aa9.4□□□□□ -0.9
MTHFD1-205ENST00000554057 TNNT2P45379 298 aaPredicted RBP9.4□□□□□ -0.9
MTHFD1-205ENST00000554057 POLR3GLQ9BT43 218 aa9.4□□□□□ -0.9
MTHFD1-205ENST00000554057 RTCBQ9Y3I0 505 aaKnown RBP9.4□□□□□ -0.9
MTHFD1-205ENST00000554057 MYH14Q7Z406 1995 aaKnown RBP9.4□□□□□ -0.9
MTHFD1-205ENST00000554057 KDM6AO15550 1401 aaPredicted RBP9.39□□□□□ -0.91
MTHFD1-205ENST00000554057 ZNF831Q5JPB2 1677 aa9.39□□□□□ -0.91
MTHFD1-205ENST00000554057 FCHSD2O94868 740 aa9.39□□□□□ -0.91
MTHFD1-205ENST00000554057 DPEP1P16444 411 aa9.39□□□□□ -0.91
MTHFD1-205ENST00000554057 TGFB2P61812 414 aa9.39□□□□□ -0.91
MTHFD1-205ENST00000554057 TRAPPC3LQ5T215 181 aa9.39□□□□□ -0.91
MTHFD1-205ENST00000554057 ARHGAP27Q6ZUM4 889 aa9.39□□□□□ -0.91
MTHFD1-205ENST00000554057 ARHGEF1Q92888 912 aaKnown RBP9.39□□□□□ -0.91
MTHFD1-205ENST00000554057 NMRK2Q9NPI5 230 aa9.39□□□□□ -0.91
MTHFD1-205ENST00000554057 CCDC87Q9NVE4 849 aa9.39□□□□□ -0.91
MTHFD1-205ENST00000554057 NOP58Q9Y2X3 529 aaKnown RBP9.39□□□□□ -0.91
MTHFD1-205ENST00000554057 CNTNAP4Q9C0A0 1308 aa9.38□□□□□ -0.91
MTHFD1-205ENST00000554057 GYS1P13807 737 aa9.38□□□□□ -0.91
MTHFD1-205ENST00000554057 ADRA2BP18089 450 aa9.38□□□□□ -0.91
MTHFD1-205ENST00000554057 ANP32AP39687 249 aaKnown RBP9.38□□□□□ -0.91
MTHFD1-205ENST00000554057 APLP1P51693 650 aa9.38□□□□□ -0.91
MTHFD1-205ENST00000554057 NLGN1Q8N2Q7 840 aa9.38□□□□□ -0.91
MTHFD1-205ENST00000554057 BCL11AQ9H165 835 aa9.38□□□□□ -0.91
MTHFD1-205ENST00000554057 ARFGEF1Q9Y6D6 1849 aa9.38□□□□□ -0.91
MTHFD1-205ENST00000554057 PLEKHG2Q9H7P9 1386 aa9.37□□□□□ -0.91
MTHFD1-205ENST00000554057 TJP1Q07157 1748 aa9.37□□□□□ -0.91
MTHFD1-205ENST00000554057 WDR90Q96KV7 1748 aa9.37□□□□□ -0.91
MTHFD1-205ENST00000554057 ERVV-2B6SEH9 535 aa9.37□□□□□ -0.91
MTHFD1-205ENST00000554057 TCERG1O14776 1098 aaKnown RBP9.37□□□□□ -0.91
MTHFD1-205ENST00000554057 TOMM70O94826 608 aa9.37□□□□□ -0.91
MTHFD1-205ENST00000554057 MS4A1P11836 297 aa9.37□□□□□ -0.91
MTHFD1-205ENST00000554057 RFC4P35249 363 aa9.37□□□□□ -0.91
MTHFD1-205ENST00000554057 RRP1P56182 461 aaKnown RBP9.37□□□□□ -0.91
MTHFD1-205ENST00000554057 RC3H1Q5TC82 1133 aaKnown RBP9.37□□□□□ -0.91
MTHFD1-205ENST00000554057 C9orf131Q5VYM1 1079 aa9.37□□□□□ -0.91
MTHFD1-205ENST00000554057 ZNF530Q6P9A1 599 aaPredicted RBP9.37□□□□□ -0.91
MTHFD1-205ENST00000554057 SRP68Q9UHB9 627 aaKnown RBP9.37□□□□□ -0.91
MTHFD1-205ENST00000554057 PARP3Q9Y6F1 533 aa9.37□□□□□ -0.91
MTHFD1-205ENST00000554057 PTCD1O75127 700 aaKnown RBP9.36□□□□□ -0.91
MTHFD1-205ENST00000554057 RPS6KA4O75676 772 aa9.36□□□□□ -0.91
MTHFD1-205ENST00000554057 HSP90AB1P08238 724 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms