RNA–Protein interactions for RNA: ENST00000553991.1

AF111169.3-201, humanhuman

TSL 5 BASIC

Gene AF111169.3, Length 756 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AF111169.3-201ENST00000553991 C10orf71Q711Q0 1435 aa17.75■□□□□ 0.43
AF111169.3-201ENST00000553991 TMF1P82094 1093 aa17.75■□□□□ 0.43
AF111169.3-201ENST00000553991 CDCA8Q53HL2 280 aa17.75■□□□□ 0.43
AF111169.3-201ENST00000553991 C9orf131Q5VYM1 1079 aa17.75■□□□□ 0.43
AF111169.3-201ENST00000553991 FCHSD2O94868 740 aa17.74■□□□□ 0.43
AF111169.3-201ENST00000553991 NKX1-1Q15270 411 aaPredicted RBP17.74■□□□□ 0.43
AF111169.3-201ENST00000553991 INSRP06213 1382 aa17.74■□□□□ 0.43
AF111169.3-201ENST00000553991 KDM2BQ8NHM5 1336 aa17.73■□□□□ 0.43
AF111169.3-201ENST00000553991 NLGN1Q8N2Q7 840 aa17.73■□□□□ 0.43
AF111169.3-201ENST00000553991 CCDC87Q9NVE4 849 aa17.73■□□□□ 0.43
AF111169.3-201ENST00000553991 DPEP1P16444 411 aa17.72■□□□□ 0.43
AF111169.3-201ENST00000553991 ITPK1Q13572 414 aa17.72■□□□□ 0.43
AF111169.3-201ENST00000553991 KIF13BQ9NQT8 1826 aa17.72■□□□□ 0.43
AF111169.3-201ENST00000553991 ATP6V1AP38606 617 aa17.71■□□□□ 0.43
AF111169.3-201ENST00000553991 HSP90AB2PQ58FF8 381 aa17.71■□□□□ 0.43
AF111169.3-201ENST00000553991 TMOD3Q9NYL9 352 aa17.71■□□□□ 0.43
AF111169.3-201ENST00000553991 FLT4P35916 1363 aa17.7■□□□□ 0.42
AF111169.3-201ENST00000553991 KIF24Q5T7B8 1368 aa17.7■□□□□ 0.42
AF111169.3-201ENST00000553991 TRAPPC3LQ5T215 181 aa17.7■□□□□ 0.42
AF111169.3-201ENST00000553991 ASAP1Q9ULH1 1129 aa17.7■□□□□ 0.42
AF111169.3-201ENST00000553991 RTCBQ9Y3I0 505 aaKnown RBP17.7■□□□□ 0.42
AF111169.3-201ENST00000553991 KIAA1551Q9HCM1 1747 aa17.69■□□□□ 0.42
AF111169.3-201ENST00000553991 KCPQ6ZWJ8 1503 aa17.69■□□□□ 0.42
AF111169.3-201ENST00000553991 FYB1O15117 783 aa17.69■□□□□ 0.42
AF111169.3-201ENST00000553991 SMC1BQ8NDV3 1235 aa17.69■□□□□ 0.42
AF111169.3-201ENST00000553991 SPG7Q9UQ90 795 aa17.69■□□□□ 0.42
AF111169.3-201ENST00000553991 MAP2P11137 1827 aaKnown RBP17.69■□□□□ 0.42
AF111169.3-201ENST00000553991 ADRA2BP18089 450 aa17.68■□□□□ 0.42
AF111169.3-201ENST00000553991 GGNBP2Q9H3C7 697 aa17.68■□□□□ 0.42
AF111169.3-201ENST00000553991 ITGB4P16144 1822 aa17.68■□□□□ 0.42
AF111169.3-201ENST00000553991 N4BP2Q86UW6 1770 aaPredicted RBP17.67■□□□□ 0.42
AF111169.3-201ENST00000553991 KCNA3P22001 575 aa17.67■□□□□ 0.42
AF111169.3-201ENST00000553991 DCAF5Q96JK2 942 aa17.67■□□□□ 0.42
AF111169.3-201ENST00000553991 RRAGCQ9HB90 399 aa17.67■□□□□ 0.42
AF111169.3-201ENST00000553991 RNF181Q9P0P0 153 aa17.67■□□□□ 0.42
AF111169.3-201ENST00000553991 PIM2Q9P1W9 311 aa17.67■□□□□ 0.42
AF111169.3-201ENST00000553991 PARP3Q9Y6F1 533 aa17.67■□□□□ 0.42
AF111169.3-201ENST00000553991 HSPA1AP0DMV8 641 aaKnown RBP17.66■□□□□ 0.42
AF111169.3-201ENST00000553991 HSPA1BP0DMV9 641 aaKnown RBP17.66■□□□□ 0.42
AF111169.3-201ENST00000553991 GYS1P13807 737 aa17.65■□□□□ 0.42
AF111169.3-201ENST00000553991 DALRD3Q5D0E6 543 aaKnown RBP17.65■□□□□ 0.42
AF111169.3-201ENST00000553991 ARHGEF1Q92888 912 aaKnown RBP17.65■□□□□ 0.42
AF111169.3-201ENST00000553991 ATG3Q9NT62 314 aa17.65■□□□□ 0.42
AF111169.3-201ENST00000553991 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.65■□□□□ 0.42
AF111169.3-201ENST00000553991 NCAPD2Q15021 1401 aa17.64■□□□□ 0.42
AF111169.3-201ENST00000553991 PKD1L3Q7Z443 1732 aa17.64■□□□□ 0.41
AF111169.3-201ENST00000553991 RFC4P35249 363 aa17.64■□□□□ 0.41
AF111169.3-201ENST00000553991 EIF4G2P78344 907 aaKnown RBP eCLIP17.64■□□□□ 0.41
AF111169.3-201ENST00000553991 RC3H1Q5TC82 1133 aaKnown RBP17.64■□□□□ 0.41
AF111169.3-201ENST00000553991 ZC3H4Q9UPT8 1303 aaKnown RBP17.63■□□□□ 0.41
AF111169.3-201ENST00000553991 KDRP35968 1356 aa17.63■□□□□ 0.41
AF111169.3-201ENST00000553991 C4AP0C0L4 1744 aa17.62■□□□□ 0.41
AF111169.3-201ENST00000553991 CNTNAP4Q9C0A0 1308 aa17.62■□□□□ 0.41
AF111169.3-201ENST00000553991 IFNL2Q8IZJ0 200 aa17.61■□□□□ 0.41
AF111169.3-201ENST00000553991 BRCA1P38398 1863 aaKnown RBP17.61■□□□□ 0.41
AF111169.3-201ENST00000553991 RPS6KA4O75676 772 aa17.6■□□□□ 0.41
AF111169.3-201ENST00000553991 PHKG2P15735 406 aa17.6■□□□□ 0.41
AF111169.3-201ENST00000553991 TNRC6CQ9HCJ0 1690 aaKnown RBP17.6■□□□□ 0.41
AF111169.3-201ENST00000553991 KIF20BQ96Q89 1820 aa17.59■□□□□ 0.41
AF111169.3-201ENST00000553991 ARFGEF1Q9Y6D6 1849 aa17.59■□□□□ 0.41
AF111169.3-201ENST00000553991 SLC4A9Q96Q91 983 aa17.59■□□□□ 0.41
AF111169.3-201ENST00000553991 VEGFAP15692 232 aaPredicted RBP17.58■□□□□ 0.4
AF111169.3-201ENST00000553991 RBM42Q9BTD8 480 aaKnown RBP17.58■□□□□ 0.4
AF111169.3-201ENST00000553991 EMILIN1Q9Y6C2 1016 aa17.58■□□□□ 0.4
AF111169.3-201ENST00000553991 HSPA5P11021 654 aaKnown RBP17.57■□□□□ 0.4
AF111169.3-201ENST00000553991 GLTPD2A6NH11 291 aa17.56■□□□□ 0.4
AF111169.3-201ENST00000553991 EYA1Q99502 592 aa17.56■□□□□ 0.4
AF111169.3-201ENST00000553991 ERVV-2B6SEH9 535 aa17.55■□□□□ 0.4
AF111169.3-201ENST00000553991 PPM1GO15355 546 aaPredicted RBP17.55■□□□□ 0.4
AF111169.3-201ENST00000553991 SLC34A2O95436 690 aa17.55■□□□□ 0.4
AF111169.3-201ENST00000553991 CHRNA5P30532 468 aa17.55■□□□□ 0.4
AF111169.3-201ENST00000553991 KDM6AO15550 1401 aaPredicted RBP17.55■□□□□ 0.4
AF111169.3-201ENST00000553991 WASHC2AQ641Q2 1341 aa17.54■□□□□ 0.4
AF111169.3-201ENST00000553991 LMNB1P20700 586 aa17.54■□□□□ 0.4
AF111169.3-201ENST00000553991 DDR1Q08345 913 aa17.54■□□□□ 0.4
AF111169.3-201ENST00000553991 ZNF831Q5JPB2 1677 aa17.54■□□□□ 0.4
AF111169.3-201ENST00000553991 USP42Q9H9J4 1324 aaKnown RBP17.53■□□□□ 0.4
AF111169.3-201ENST00000553991 FKBP8Q14318 412 aa17.53■□□□□ 0.4
AF111169.3-201ENST00000553991 HSP90AB1P08238 724 aaKnown RBP17.52■□□□□ 0.4
AF111169.3-201ENST00000553991 RASSF7Q02833 373 aa17.52■□□□□ 0.4
AF111169.3-201ENST00000553991 SRP68Q9UHB9 627 aaKnown RBP17.52■□□□□ 0.4
AF111169.3-201ENST00000553991 POLRMTO00411 1230 aaKnown RBP17.51■□□□□ 0.39
AF111169.3-201ENST00000553991 CRKLP46109 303 aaKnown RBP17.5■□□□□ 0.39
AF111169.3-201ENST00000553991 CREBZFQ9NS37 354 aa17.49■□□□□ 0.39
AF111169.3-201ENST00000553991 SBF1O95248 1867 aa17.49■□□□□ 0.39
AF111169.3-201ENST00000553991 COL5A3P25940 1745 aaPredicted RBP17.49■□□□□ 0.39
AF111169.3-201ENST00000553991 ANKRD26Q9UPS8 1709 aa17.49■□□□□ 0.39
AF111169.3-201ENST00000553991 TM4SF1P30408 202 aa17.48■□□□□ 0.39
AF111169.3-201ENST00000553991 PRDM10Q9NQV6 1147 aa17.48■□□□□ 0.39
AF111169.3-201ENST00000553991 CABP4P57796 275 aa17.47■□□□□ 0.39
AF111169.3-201ENST00000553991 CARD14Q9BXL6 1004 aa17.47■□□□□ 0.39
AF111169.3-201ENST00000553991 PTCD1O75127 700 aaKnown RBP17.46■□□□□ 0.39
AF111169.3-201ENST00000553991 POLR3GLQ9BT43 218 aa17.46■□□□□ 0.39
AF111169.3-201ENST00000553991 MYH14Q7Z406 1995 aaKnown RBP17.46■□□□□ 0.39
AF111169.3-201ENST00000553991 POTECB2RU33 542 aa17.45■□□□□ 0.38
AF111169.3-201ENST00000553991 ZPR1O75312 459 aa17.45■□□□□ 0.38
AF111169.3-201ENST00000553991 DPY19L2Q6NUT2 758 aa17.45■□□□□ 0.38
AF111169.3-201ENST00000553991 TTLL6Q8N841 843 aa17.45■□□□□ 0.38
AF111169.3-201ENST00000553991 FOXN1O15353 648 aa17.44■□□□□ 0.38
AF111169.3-201ENST00000553991 EIF4A2Q14240 407 aaKnown RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms