RNA–Protein interactions for RNA: ENST00000553990.1

AL390816.1-201, humanhuman

TSL 3 BASIC

Gene AL390816.1, Length 322 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL390816.1-201ENST00000553990 ADCY9O60503 1353 aa7.99□□□□□ -1.13
AL390816.1-201ENST00000553990 KDRP35968 1356 aa7.99□□□□□ -1.13
AL390816.1-201ENST00000553990 KIF24Q5T7B8 1368 aa7.99□□□□□ -1.13
AL390816.1-201ENST00000553990 GRIN3BO60391 1043 aa7.99□□□□□ -1.13
AL390816.1-201ENST00000553990 HSPA5P11021 654 aaKnown RBP7.99□□□□□ -1.13
AL390816.1-201ENST00000553990 NKX1-1Q15270 411 aaPredicted RBP7.99□□□□□ -1.13
AL390816.1-201ENST00000553990 SMARCC1Q92922 1105 aaPredicted RBP7.99□□□□□ -1.13
AL390816.1-201ENST00000553990 MMP10P09238 476 aa7.98□□□□□ -1.13
AL390816.1-201ENST00000553990 CDCA8Q53HL2 280 aa7.98□□□□□ -1.13
AL390816.1-201ENST00000553990 IFNL2Q8IZJ0 200 aa7.98□□□□□ -1.13
AL390816.1-201ENST00000553990 GPBP1L1Q9HC44 474 aaPredicted RBP7.98□□□□□ -1.13
AL390816.1-201ENST00000553990 CD2APQ9Y5K6 639 aa7.98□□□□□ -1.13
AL390816.1-201ENST00000553990 MYH14Q7Z406 1995 aaKnown RBP7.98□□□□□ -1.13
AL390816.1-201ENST00000553990 KIF13BQ9NQT8 1826 aa7.98□□□□□ -1.13
AL390816.1-201ENST00000553990 VIRMAQ69YN4 1812 aaKnown RBP7.97□□□□□ -1.13
AL390816.1-201ENST00000553990 A0A0G2JLW4 131 aa7.97□□□□□ -1.13
AL390816.1-201ENST00000553990 SSFA2P28290 1259 aa7.97□□□□□ -1.13
AL390816.1-201ENST00000553990 CNGB1Q14028 1251 aaPredicted RBP7.97□□□□□ -1.13
AL390816.1-201ENST00000553990 ZNF530Q6P9A1 599 aaPredicted RBP7.97□□□□□ -1.13
AL390816.1-201ENST00000553990 FLAD1Q8NFF5 587 aa7.97□□□□□ -1.13
AL390816.1-201ENST00000553990 PANK3Q9H999 370 aa7.97□□□□□ -1.13
AL390816.1-201ENST00000553990 SRP68Q9UHB9 627 aaKnown RBP7.97□□□□□ -1.13
AL390816.1-201ENST00000553990 BRCA1P38398 1863 aaKnown RBP7.96□□□□□ -1.13
AL390816.1-201ENST00000553990 SLC24A1O60721 1099 aa7.96□□□□□ -1.14
AL390816.1-201ENST00000553990 PTCD1O75127 700 aaKnown RBP7.96□□□□□ -1.14
AL390816.1-201ENST00000553990 BCS1LQ9Y276 419 aa7.96□□□□□ -1.14
AL390816.1-201ENST00000553990 C10orf71Q711Q0 1435 aa7.95□□□□□ -1.14
AL390816.1-201ENST00000553990 SCN11AQ9UI33 1791 aa7.95□□□□□ -1.14
AL390816.1-201ENST00000553990 DPEP1P16444 411 aa7.95□□□□□ -1.14
AL390816.1-201ENST00000553990 ARHGEF1Q92888 912 aaKnown RBP7.95□□□□□ -1.14
AL390816.1-201ENST00000553990 ADAMTS7Q9UKP4 1686 aa7.95□□□□□ -1.14
AL390816.1-201ENST00000553990 KIF3CO14782 793 aa7.94□□□□□ -1.14
AL390816.1-201ENST00000553990 GYS1P13807 737 aa7.94□□□□□ -1.14
AL390816.1-201ENST00000553990 CABP4P57796 275 aa7.94□□□□□ -1.14
AL390816.1-201ENST00000553990 TRAPPC3LQ5T215 181 aa7.94□□□□□ -1.14
AL390816.1-201ENST00000553990 SULT6B1Q6IMI4 303 aa7.94□□□□□ -1.14
AL390816.1-201ENST00000553990 RTCBQ9Y3I0 505 aaKnown RBP7.94□□□□□ -1.14
AL390816.1-201ENST00000553990 ZNF831Q5JPB2 1677 aa7.94□□□□□ -1.14
AL390816.1-201ENST00000553990 HMOX1P09601 288 aa7.93□□□□□ -1.14
AL390816.1-201ENST00000553990 CHRNA5P30532 468 aa7.93□□□□□ -1.14
AL390816.1-201ENST00000553990 HTRA3P83110 453 aa7.93□□□□□ -1.14
AL390816.1-201ENST00000553990 DDR1Q08345 913 aa7.93□□□□□ -1.14
AL390816.1-201ENST00000553990 SLC39A6Q13433 755 aa7.93□□□□□ -1.14
AL390816.1-201ENST00000553990 FKBP8Q14318 412 aa7.93□□□□□ -1.14
AL390816.1-201ENST00000553990 PLEKHO1Q53GL0 409 aaPredicted RBP7.93□□□□□ -1.14
AL390816.1-201ENST00000553990 ARHGAP27Q6ZUM4 889 aa7.93□□□□□ -1.14
AL390816.1-201ENST00000553990 MORC1Q86VD1 984 aa7.93□□□□□ -1.14
AL390816.1-201ENST00000553990 NFATC2IPQ8NCF5 419 aa7.93□□□□□ -1.14
AL390816.1-201ENST00000553990 NMRK2Q9NPI5 230 aa7.93□□□□□ -1.14
AL390816.1-201ENST00000553990 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.93□□□□□ -1.14
AL390816.1-201ENST00000553990 KCPQ6ZWJ8 1503 aa7.93□□□□□ -1.14
AL390816.1-201ENST00000553990 RPS6KA4O75676 772 aa7.92□□□□□ -1.14
AL390816.1-201ENST00000553990 FCHSD2O94868 740 aa7.92□□□□□ -1.14
AL390816.1-201ENST00000553990 HSPA6P17066 643 aa7.92□□□□□ -1.14
AL390816.1-201ENST00000553990 RFC4P35249 363 aa7.92□□□□□ -1.14
AL390816.1-201ENST00000553990 CRKLP46109 303 aaKnown RBP7.92□□□□□ -1.14
AL390816.1-201ENST00000553990 MTHFSP49914 203 aa7.92□□□□□ -1.14
AL390816.1-201ENST00000553990 EIF4G2P78344 907 aaKnown RBP eCLIP7.92□□□□□ -1.14
AL390816.1-201ENST00000553990 DNAJC10Q8IXB1 793 aa7.92□□□□□ -1.14
AL390816.1-201ENST00000553990 DCAF5Q96JK2 942 aa7.92□□□□□ -1.14
AL390816.1-201ENST00000553990 LGR6Q9HBX8 967 aa7.92□□□□□ -1.14
AL390816.1-201ENST00000553990 CNTNAP4Q9C0A0 1308 aa7.92□□□□□ -1.14
AL390816.1-201ENST00000553990 AFDNP55196 1824 aaKnown RBP7.92□□□□□ -1.14
AL390816.1-201ENST00000553990 ARFGEF1Q9Y6D6 1849 aa7.92□□□□□ -1.14
AL390816.1-201ENST00000553990 ERVV-2B6SEH9 535 aa7.91□□□□□ -1.14
AL390816.1-201ENST00000553990 KCNA3P22001 575 aa7.91□□□□□ -1.14
AL390816.1-201ENST00000553990 IL13P35225 146 aa7.91□□□□□ -1.14
AL390816.1-201ENST00000553990 RASSF7Q02833 373 aa7.91□□□□□ -1.14
AL390816.1-201ENST00000553990 C1orf141Q5JVX7 400 aa7.91□□□□□ -1.14
AL390816.1-201ENST00000553990 CCDC87Q9NVE4 849 aa7.91□□□□□ -1.14
AL390816.1-201ENST00000553990 PARP3Q9Y6F1 533 aa7.91□□□□□ -1.14
AL390816.1-201ENST00000553990 CEP350Q5VT06 3117 aa7.91□□□□□ -1.14
AL390816.1-201ENST00000553990 WDR90Q96KV7 1748 aa7.9□□□□□ -1.14
AL390816.1-201ENST00000553990 CARMIL3Q8ND23 1372 aa7.9□□□□□ -1.14
AL390816.1-201ENST00000553990 USP42Q9H9J4 1324 aaKnown RBP7.9□□□□□ -1.14
AL390816.1-201ENST00000553990 CC2D1BQ5T0F9 858 aaKnown RBP7.9□□□□□ -1.14
AL390816.1-201ENST00000553990 USPL1Q5W0Q7 1092 aa7.9□□□□□ -1.14
AL390816.1-201ENST00000553990 INTS5Q6P9B9 1019 aaKnown RBP7.9□□□□□ -1.14
AL390816.1-201ENST00000553990 NLGN1Q8N2Q7 840 aa7.9□□□□□ -1.14
AL390816.1-201ENST00000553990 KIF7Q2M1P5 1343 aa7.89□□□□□ -1.15
AL390816.1-201ENST00000553990 HSP90AB1P08238 724 aaKnown RBP7.89□□□□□ -1.15
AL390816.1-201ENST00000553990 TGFB2P61812 414 aa7.89□□□□□ -1.15
AL390816.1-201ENST00000553990 RC3H1Q5TC82 1133 aaKnown RBP7.89□□□□□ -1.15
AL390816.1-201ENST00000553990 IFFO2Q5TF58 517 aa7.89□□□□□ -1.15
AL390816.1-201ENST00000553990 C9orf131Q5VYM1 1079 aa7.89□□□□□ -1.15
AL390816.1-201ENST00000553990 CCDC24Q8N4L8 307 aa7.89□□□□□ -1.15
AL390816.1-201ENST00000553990 CCER1Q8TC90 406 aaPredicted RBP7.89□□□□□ -1.15
AL390816.1-201ENST00000553990 ZBTB1Q9Y2K1 713 aa7.89□□□□□ -1.15
AL390816.1-201ENST00000553990 CACNA1SQ13698 1873 aa7.89□□□□□ -1.15
AL390816.1-201ENST00000553990 COL11A2P13942 1736 aaPredicted RBP7.89□□□□□ -1.15
AL390816.1-201ENST00000553990 TIAM2Q8IVF5 1701 aa7.89□□□□□ -1.15
AL390816.1-201ENST00000553990 MRC1P22897 1456 aa7.88□□□□□ -1.15
AL390816.1-201ENST00000553990 SBF1O95248 1867 aa7.88□□□□□ -1.15
AL390816.1-201ENST00000553990 POLRMTO00411 1230 aaKnown RBP7.88□□□□□ -1.15
AL390816.1-201ENST00000553990 RNMTO43148 476 aaKnown RBP7.88□□□□□ -1.15
AL390816.1-201ENST00000553990 PRELPP51888 382 aa7.88□□□□□ -1.15
AL390816.1-201ENST00000553990 MTHFSDQ2M296 383 aaKnown RBP7.88□□□□□ -1.15
AL390816.1-201ENST00000553990 AMOTQ4VCS5 1084 aa7.88□□□□□ -1.15
AL390816.1-201ENST00000553990 BICDL1Q6ZP65 573 aa7.88□□□□□ -1.15
AL390816.1-201ENST00000553990 RNF181Q9P0P0 153 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms