RNA–Protein interactions for RNA: ENST00000553851.2

PRAF2-202, Transcript of PRA1 domain family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAF2, Length 1,334 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAF2-202ENST00000553851 SYT17Q9BSW7 474 aa27.23■■□□□ 1.95
PRAF2-202ENST00000553851 U2SURPO15042 1029 aaKnown RBP27.22■■□□□ 1.95
PRAF2-202ENST00000553851 ITPK1Q13572 414 aa27.22■■□□□ 1.95
PRAF2-202ENST00000553851 DCAF8L1A6NGE4 600 aa27.21■■□□□ 1.95
PRAF2-202ENST00000553851 NFATC2IPQ8NCF5 419 aa27.21■■□□□ 1.95
PRAF2-202ENST00000553851 RBM42Q9BTD8 480 aaKnown RBP27.21■■□□□ 1.95
PRAF2-202ENST00000553851 C4BP0C0L5 1744 aa27.21■■□□□ 1.95
PRAF2-202ENST00000553851 COL3A1P02461 1466 aaPredicted RBP27.21■■□□□ 1.95
PRAF2-202ENST00000553851 AMIGO3Q86WK7 504 aa27.19■■□□□ 1.94
PRAF2-202ENST00000553851 MTHFSDQ2M296 383 aaKnown RBP27.18■■□□□ 1.94
PRAF2-202ENST00000553851 SMIM5Q71RC9 77 aa27.18■■□□□ 1.94
PRAF2-202ENST00000553851 CFAP53Q96M91 514 aa27.18■■□□□ 1.94
PRAF2-202ENST00000553851 PHF14O94880 888 aa27.17■■□□□ 1.94
PRAF2-202ENST00000553851 PPP2R1AP30153 589 aa27.17■■□□□ 1.94
PRAF2-202ENST00000553851 MSL1Q68DK7 614 aa27.17■■□□□ 1.94
PRAF2-202ENST00000553851 SLC4A9Q96Q91 983 aa27.17■■□□□ 1.94
PRAF2-202ENST00000553851 LGR6Q9HBX8 967 aa27.17■■□□□ 1.94
PRAF2-202ENST00000553851 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.16■■□□□ 1.94
PRAF2-202ENST00000553851 COL24A1Q17RW2 1714 aa27.15■■□□□ 1.94
PRAF2-202ENST00000553851 GNPATO15228 680 aa27.15■■□□□ 1.94
PRAF2-202ENST00000553851 RNMTO43148 476 aaKnown RBP27.15■■□□□ 1.94
PRAF2-202ENST00000553851 KLHL34Q8N239 644 aa27.15■■□□□ 1.94
PRAF2-202ENST00000553851 PTCD1O75127 700 aaKnown RBP27.14■■□□□ 1.93
PRAF2-202ENST00000553851 SSFA2P28290 1259 aa27.14■■□□□ 1.93
PRAF2-202ENST00000553851 MAP3K5Q99683 1374 aa27.13■■□□□ 1.93
PRAF2-202ENST00000553851 SLC52A2Q9HAB3 445 aa27.13■■□□□ 1.93
PRAF2-202ENST00000553851 NUDCQ9Y266 331 aa27.12■■□□□ 1.93
PRAF2-202ENST00000553851 SCN11AQ9UI33 1791 aa27.12■■□□□ 1.93
PRAF2-202ENST00000553851 UBR3Q6ZT12 1888 aa27.12■■□□□ 1.93
PRAF2-202ENST00000553851 RC3H1Q5TC82 1133 aaKnown RBP27.09■■□□□ 1.93
PRAF2-202ENST00000553851 GAS2L2Q8NHY3 880 aa27.08■■□□□ 1.93
PRAF2-202ENST00000553851 RTCBQ9Y3I0 505 aaKnown RBP27.08■■□□□ 1.93
PRAF2-202ENST00000553851 ZNF831Q5JPB2 1677 aa27.06■■□□□ 1.92
PRAF2-202ENST00000553851 U2AF1L5P0DN76 240 aaPredicted RBP27.06■■□□□ 1.92
PRAF2-202ENST00000553851 PRKAR2BP31323 418 aa27.06■■□□□ 1.92
PRAF2-202ENST00000553851 U2AF1Q01081 240 aaKnown RBP eCLIP27.06■■□□□ 1.92
PRAF2-202ENST00000553851 RSPH6AQ9H0K4 717 aa27.06■■□□□ 1.92
PRAF2-202ENST00000553851 CNTNAP4Q9C0A0 1308 aa27.06■■□□□ 1.92
PRAF2-202ENST00000553851 SLC39A6Q13433 755 aa27.05■■□□□ 1.92
PRAF2-202ENST00000553851 TRAPPC3LQ5T215 181 aa27.05■■□□□ 1.92
PRAF2-202ENST00000553851 GNAT3A8MTJ3 354 aa27.04■■□□□ 1.92
PRAF2-202ENST00000553851 PHACTR3Q96KR7 559 aa27.04■■□□□ 1.92
PRAF2-202ENST00000553851 MRC1P22897 1456 aa27.03■■□□□ 1.92
PRAF2-202ENST00000553851 RPS6KA4O75676 772 aa27.03■■□□□ 1.92
PRAF2-202ENST00000553851 NLGN2Q8NFZ4 835 aa27.03■■□□□ 1.92
PRAF2-202ENST00000553851 YY1P25490 414 aa27.02■■□□□ 1.92
PRAF2-202ENST00000553851 IL17REQ8NFR9 667 aa27.02■■□□□ 1.92
PRAF2-202ENST00000553851 UTRNP46939 3433 aa27.02■■□□□ 1.92
PRAF2-202ENST00000553851 CRKLP46109 303 aaKnown RBP27.01■■□□□ 1.91
PRAF2-202ENST00000553851 ARHGEF1Q92888 912 aaKnown RBP27.01■■□□□ 1.91
PRAF2-202ENST00000553851 FCHSD2O94868 740 aa27■■□□□ 1.91
PRAF2-202ENST00000553851 ADRA2BP18089 450 aa27■■□□□ 1.91
PRAF2-202ENST00000553851 GPR162Q16538 588 aa27■■□□□ 1.91
PRAF2-202ENST00000553851 ADAMTS7Q9UKP4 1686 aa27■■□□□ 1.91
PRAF2-202ENST00000553851 COL5A3P25940 1745 aaPredicted RBP27■■□□□ 1.91
PRAF2-202ENST00000553851 VIRMAQ69YN4 1812 aaKnown RBP26.99■■□□□ 1.91
PRAF2-202ENST00000553851 TEFQ10587 303 aa26.98■■□□□ 1.91
PRAF2-202ENST00000553851 DDX10Q13206 875 aaKnown RBP26.98■■□□□ 1.91
PRAF2-202ENST00000553851 DNAJC10Q8IXB1 793 aa26.98■■□□□ 1.91
PRAF2-202ENST00000553851 MYH14Q7Z406 1995 aaKnown RBP26.98■■□□□ 1.91
PRAF2-202ENST00000553851 RFC4P35249 363 aa26.97■■□□□ 1.91
PRAF2-202ENST00000553851 CD2APQ9Y5K6 639 aa26.97■■□□□ 1.91
PRAF2-202ENST00000553851 INTS5Q6P9B9 1019 aaKnown RBP26.96■■□□□ 1.91
PRAF2-202ENST00000553851 PELP1Q8IZL8 1130 aaKnown RBP26.96■■□□□ 1.91
PRAF2-202ENST00000553851 TJP1Q07157 1748 aa26.95■■□□□ 1.9
PRAF2-202ENST00000553851 TTC5Q8N0Z6 440 aa26.94■■□□□ 1.9
PRAF2-202ENST00000553851 NLGN1Q8N2Q7 840 aa26.94■■□□□ 1.9
PRAF2-202ENST00000553851 KCPQ6ZWJ8 1503 aa26.94■■□□□ 1.9
PRAF2-202ENST00000553851 MMP10P09238 476 aa26.93■■□□□ 1.9
PRAF2-202ENST00000553851 CYP19A1P11511 503 aaPredicted RBP26.92■■□□□ 1.9
PRAF2-202ENST00000553851 GYS1P13807 737 aa26.92■■□□□ 1.9
PRAF2-202ENST00000553851 VSIG10Q8N0Z9 540 aa26.92■■□□□ 1.9
PRAF2-202ENST00000553851 CCDC87Q9NVE4 849 aa26.92■■□□□ 1.9
PRAF2-202ENST00000553851 CICQ96RK0 1608 aaPredicted RBP26.92■■□□□ 1.9
PRAF2-202ENST00000553851 CEMIPQ8WUJ3 1361 aa26.91■■□□□ 1.9
PRAF2-202ENST00000553851 GOLGB1Q14789 3259 aaKnown RBP26.91■■□□□ 1.9
PRAF2-202ENST00000553851 RALBP1Q15311 655 aa26.9■■□□□ 1.9
PRAF2-202ENST00000553851 ZNF790Q6PG37 636 aa26.9■■□□□ 1.9
PRAF2-202ENST00000553851 RTF1Q92541 710 aaKnown RBP26.9■■□□□ 1.9
PRAF2-202ENST00000553851 SRP68Q9UHB9 627 aaKnown RBP26.9■■□□□ 1.9
PRAF2-202ENST00000553851 ZNF496Q96IT1 587 aaPredicted RBP26.89■■□□□ 1.89
PRAF2-202ENST00000553851 BTBD11A6QL63 1104 aa26.87■■□□□ 1.89
PRAF2-202ENST00000553851 YBX3P16989 372 aaKnown RBP eCLIP26.87■■□□□ 1.89
PRAF2-202ENST00000553851 MCM10Q7L590 875 aa26.87■■□□□ 1.89
PRAF2-202ENST00000553851 SOS1Q07889 1333 aaPredicted RBP26.86■■□□□ 1.89
PRAF2-202ENST00000553851 USP42Q9H9J4 1324 aaKnown RBP26.86■■□□□ 1.89
PRAF2-202ENST00000553851 NEFMP07197 916 aa26.86■■□□□ 1.89
PRAF2-202ENST00000553851 ZBTB1Q9Y2K1 713 aa26.86■■□□□ 1.89
PRAF2-202ENST00000553851 HTATSF1O43719 755 aaKnown RBP26.85■■□□□ 1.89
PRAF2-202ENST00000553851 STARD3NLO95772 234 aa26.85■■□□□ 1.89
PRAF2-202ENST00000553851 DCTN1Q14203 1278 aa26.85■■□□□ 1.89
PRAF2-202ENST00000553851 UBR2Q8IWV8 1755 aa26.85■■□□□ 1.89
PRAF2-202ENST00000553851 C4AP0C0L4 1744 aa26.84■■□□□ 1.89
PRAF2-202ENST00000553851 HEG1Q9ULI3 1381 aa26.84■■□□□ 1.89
PRAF2-202ENST00000553851 SIPA1L3O60292 1781 aaPredicted RBP26.84■■□□□ 1.89
PRAF2-202ENST00000553851 KCNQ3O43525 872 aa26.84■■□□□ 1.89
PRAF2-202ENST00000553851 FKBP8Q14318 412 aa26.84■■□□□ 1.89
PRAF2-202ENST00000553851 FMNL2Q96PY5 1086 aa26.84■■□□□ 1.89
PRAF2-202ENST00000553851 PARP3Q9Y6F1 533 aa26.84■■□□□ 1.89
PRAF2-202ENST00000553851 GRIN3BO60391 1043 aa26.83■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms