RNA–Protein interactions for RNA: ENST00000553535.2

SIX1-202, Transcript of SIX homeobox 1, humanhuman

TSL 3

Gene SIX1, Length 1,556 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-202ENST00000553535 LOC102724428A0A0B4J2F2 783 aa17.04■□□□□ 0.32
SIX1-202ENST00000553535 SIK1P57059 783 aa17.04■□□□□ 0.32
SIX1-202ENST00000553535 MSL1Q68DK7 614 aa17.04■□□□□ 0.32
SIX1-202ENST00000553535 ASAP1Q9ULH1 1129 aa17.04■□□□□ 0.32
SIX1-202ENST00000553535 AK7Q96M32 723 aa17.03■□□□□ 0.32
SIX1-202ENST00000553535 UBR3Q6ZT12 1888 aa17.03■□□□□ 0.32
SIX1-202ENST00000553535 MORC1Q86VD1 984 aa17.02■□□□□ 0.32
SIX1-202ENST00000553535 ATG3Q9NT62 314 aa17.02■□□□□ 0.32
SIX1-202ENST00000553535 SMIM5Q71RC9 77 aa17.02■□□□□ 0.31
SIX1-202ENST00000553535 LINC00116Q8NCU8 138 aa17.02■□□□□ 0.31
SIX1-202ENST00000553535 ITPK1Q13572 414 aa17.01■□□□□ 0.31
SIX1-202ENST00000553535 PLEKHO1Q53GL0 409 aaPredicted RBP17.01■□□□□ 0.31
SIX1-202ENST00000553535 KNSTRNQ9Y448 316 aa17.01■□□□□ 0.31
SIX1-202ENST00000553535 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17■□□□□ 0.31
SIX1-202ENST00000553535 ERVV-2B6SEH9 535 aa17■□□□□ 0.31
SIX1-202ENST00000553535 SSFA2P28290 1259 aa16.99■□□□□ 0.31
SIX1-202ENST00000553535 ATP6V1AP38606 617 aa16.99■□□□□ 0.31
SIX1-202ENST00000553535 PELP1Q8IZL8 1130 aaKnown RBP16.99■□□□□ 0.31
SIX1-202ENST00000553535 CD2APQ9Y5K6 639 aa16.99■□□□□ 0.31
SIX1-202ENST00000553535 PHF14O94880 888 aa16.98■□□□□ 0.31
SIX1-202ENST00000553535 HSP90AB1P08238 724 aaKnown RBP16.98■□□□□ 0.31
SIX1-202ENST00000553535 AMOTQ4VCS5 1084 aa16.98■□□□□ 0.31
SIX1-202ENST00000553535 DCAF5Q96JK2 942 aa16.98■□□□□ 0.31
SIX1-202ENST00000553535 YBX3P16989 372 aaKnown RBP eCLIP16.98■□□□□ 0.31
SIX1-202ENST00000553535 AMER1Q5JTC6 1135 aaPredicted RBP16.98■□□□□ 0.31
SIX1-202ENST00000553535 AEBP1Q8IUX7 1158 aa16.98■□□□□ 0.31
SIX1-202ENST00000553535 ZNF219Q9P2Y4 722 aaPredicted RBP16.98■□□□□ 0.31
SIX1-202ENST00000553535 ZNF530Q6P9A1 599 aaPredicted RBP16.97■□□□□ 0.31
SIX1-202ENST00000553535 SLC4A9Q96Q91 983 aa16.97■□□□□ 0.31
SIX1-202ENST00000553535 GRIN3BO60391 1043 aa16.96■□□□□ 0.31
SIX1-202ENST00000553535 IL13P35225 146 aa16.96■□□□□ 0.31
SIX1-202ENST00000553535 KIF7Q2M1P5 1343 aa16.96■□□□□ 0.31
SIX1-202ENST00000553535 KDRP35968 1356 aa16.96■□□□□ 0.31
SIX1-202ENST00000553535 GNPATO15228 680 aa16.95■□□□□ 0.3
SIX1-202ENST00000553535 KDM6AO15550 1401 aaPredicted RBP16.95■□□□□ 0.3
SIX1-202ENST00000553535 SULT6B1Q6IMI4 303 aa16.94■□□□□ 0.3
SIX1-202ENST00000553535 ZNF831Q5JPB2 1677 aa16.94■□□□□ 0.3
SIX1-202ENST00000553535 PER1O15534 1290 aaPredicted RBP16.94■□□□□ 0.3
SIX1-202ENST00000553535 MTHFSP49914 203 aa16.94■□□□□ 0.3
SIX1-202ENST00000553535 CABP4P57796 275 aa16.94■□□□□ 0.3
SIX1-202ENST00000553535 RBM42Q9BTD8 480 aaKnown RBP16.94■□□□□ 0.3
SIX1-202ENST00000553535 RC3H1Q5TC82 1133 aaKnown RBP16.93■□□□□ 0.3
SIX1-202ENST00000553535 C1orf141Q5JVX7 400 aa16.92■□□□□ 0.3
SIX1-202ENST00000553535 TRAPPC3LQ5T215 181 aa16.91■□□□□ 0.3
SIX1-202ENST00000553535 RTCBQ9Y3I0 505 aaKnown RBP16.91■□□□□ 0.3
SIX1-202ENST00000553535 MYH14Q7Z406 1995 aaKnown RBP16.91■□□□□ 0.3
SIX1-202ENST00000553535 NFATC2IPQ8NCF5 419 aa16.9■□□□□ 0.3
SIX1-202ENST00000553535 COL5A3P25940 1745 aaPredicted RBP16.9■□□□□ 0.3
SIX1-202ENST00000553535 RPS6KA4O75676 772 aa16.89■□□□□ 0.3
SIX1-202ENST00000553535 CNTNAP4Q9C0A0 1308 aa16.89■□□□□ 0.29
SIX1-202ENST00000553535 ARHGEF1Q92888 912 aaKnown RBP16.89■□□□□ 0.29
SIX1-202ENST00000553535 SCN11AQ9UI33 1791 aa16.88■□□□□ 0.29
SIX1-202ENST00000553535 MMP10P09238 476 aa16.88■□□□□ 0.29
SIX1-202ENST00000553535 NLGN1Q8N2Q7 840 aa16.88■□□□□ 0.29
SIX1-202ENST00000553535 PTCD1O75127 700 aaKnown RBP16.87■□□□□ 0.29
SIX1-202ENST00000553535 C1QTNF8P60827 252 aa16.87■□□□□ 0.29
SIX1-202ENST00000553535 AKAP4Q5JQC9 854 aa16.87■□□□□ 0.29
SIX1-202ENST00000553535 CC2D1BQ5T0F9 858 aaKnown RBP16.85■□□□□ 0.29
SIX1-202ENST00000553535 LGR6Q9HBX8 967 aa16.85■□□□□ 0.29
SIX1-202ENST00000553535 HMOX1P09601 288 aa16.85■□□□□ 0.29
SIX1-202ENST00000553535 GYS1P13807 737 aa16.85■□□□□ 0.29
SIX1-202ENST00000553535 RFC4P35249 363 aa16.85■□□□□ 0.29
SIX1-202ENST00000553535 KIF13BQ9NQT8 1826 aa16.84■□□□□ 0.29
SIX1-202ENST00000553535 DIAPH1O60610 1272 aaKnown RBP16.84■□□□□ 0.29
SIX1-202ENST00000553535 CRKLP46109 303 aaKnown RBP16.84■□□□□ 0.29
SIX1-202ENST00000553535 SLC52A2Q9HAB3 445 aa16.84■□□□□ 0.29
SIX1-202ENST00000553535 WWC3Q9ULE0 1092 aa16.83■□□□□ 0.28
SIX1-202ENST00000553535 NPC1L1Q9UHC9 1359 aa16.83■□□□□ 0.28
SIX1-202ENST00000553535 VIRMAQ69YN4 1812 aaKnown RBP16.83■□□□□ 0.28
SIX1-202ENST00000553535 RNMTO43148 476 aaKnown RBP16.82■□□□□ 0.28
SIX1-202ENST00000553535 GIGYF1O75420 1035 aaPredicted RBP16.82■□□□□ 0.28
SIX1-202ENST00000553535 MTHFSDQ2M296 383 aaKnown RBP16.82■□□□□ 0.28
SIX1-202ENST00000553535 TJP1Q07157 1748 aa16.82■□□□□ 0.28
SIX1-202ENST00000553535 CICQ96RK0 1608 aaPredicted RBP16.82■□□□□ 0.28
SIX1-202ENST00000553535 TGFB2P61812 414 aa16.81■□□□□ 0.28
SIX1-202ENST00000553535 INTS5Q6P9B9 1019 aaKnown RBP16.81■□□□□ 0.28
SIX1-202ENST00000553535 C4AP0C0L4 1744 aa16.81■□□□□ 0.28
SIX1-202ENST00000553535 KIAA1551Q9HCM1 1747 aa16.81■□□□□ 0.28
SIX1-202ENST00000553535 ABCB7O75027 752 aa16.81■□□□□ 0.28
SIX1-202ENST00000553535 ATP10DQ9P241 1426 aa16.8■□□□□ 0.28
SIX1-202ENST00000553535 PXDNLA1KZ92 1463 aa16.8■□□□□ 0.28
SIX1-202ENST00000553535 N4BP2Q86UW6 1770 aaPredicted RBP16.79■□□□□ 0.28
SIX1-202ENST00000553535 ADCY9O60503 1353 aa16.79■□□□□ 0.28
SIX1-202ENST00000553535 A0A0G2JLW4 131 aa16.79■□□□□ 0.28
SIX1-202ENST00000553535 SLC39A6Q13433 755 aa16.79■□□□□ 0.28
SIX1-202ENST00000553535 C10orf71Q711Q0 1435 aa16.79■□□□□ 0.28
SIX1-202ENST00000553535 DNAJC10Q8IXB1 793 aa16.79■□□□□ 0.28
SIX1-202ENST00000553535 CCDC87Q9NVE4 849 aa16.79■□□□□ 0.28
SIX1-202ENST00000553535 SRP68Q9UHB9 627 aaKnown RBP16.79■□□□□ 0.28
SIX1-202ENST00000553535 PARP3Q9Y6F1 533 aa16.79■□□□□ 0.28
SIX1-202ENST00000553535 MRC1P22897 1456 aa16.79■□□□□ 0.28
SIX1-202ENST00000553535 ADAMTS7Q9UKP4 1686 aa16.79■□□□□ 0.28
SIX1-202ENST00000553535 SENP3-EIF4A1A0A087X0R7 540 aa16.78■□□□□ 0.28
SIX1-202ENST00000553535 COL3A1P02461 1466 aaPredicted RBP16.78■□□□□ 0.28
SIX1-202ENST00000553535 USP42Q9H9J4 1324 aaKnown RBP16.78■□□□□ 0.28
SIX1-202ENST00000553535 FKBP8Q14318 412 aa16.77■□□□□ 0.28
SIX1-202ENST00000553535 CYP19A1P11511 503 aaPredicted RBP16.77■□□□□ 0.27
SIX1-202ENST00000553535 DPEP1P16444 411 aa16.77■□□□□ 0.27
SIX1-202ENST00000553535 CNGB1Q14028 1251 aaPredicted RBP16.76■□□□□ 0.27
SIX1-202ENST00000553535 KCPQ6ZWJ8 1503 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms