RNA–Protein interactions for RNA: ENST00000553460.5

TMEM55B-203, humanhuman

TSL 5

Gene TMEM55B, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-203ENST00000553460 ZNF530Q6P9A1 599 aaPredicted RBP22.11■■□□□ 1.13
TMEM55B-203ENST00000553460 ATG3Q9NT62 314 aa22.11■■□□□ 1.13
TMEM55B-203ENST00000553460 ZNF831Q5JPB2 1677 aa22.1■■□□□ 1.13
TMEM55B-203ENST00000553460 ITPK1Q13572 414 aa22.09■■□□□ 1.13
TMEM55B-203ENST00000553460 AMIGO3Q86WK7 504 aa22.09■■□□□ 1.13
TMEM55B-203ENST00000553460 CD2APQ9Y5K6 639 aa22.09■■□□□ 1.13
TMEM55B-203ENST00000553460 KDRP35968 1356 aa22.09■■□□□ 1.13
TMEM55B-203ENST00000553460 KDM6AO15550 1401 aaPredicted RBP22.08■■□□□ 1.13
TMEM55B-203ENST00000553460 GNPATO15228 680 aa22.08■■□□□ 1.13
TMEM55B-203ENST00000553460 AMER1Q5JTC6 1135 aaPredicted RBP22.08■■□□□ 1.13
TMEM55B-203ENST00000553460 C1orf141Q5JVX7 400 aa22.08■■□□□ 1.13
TMEM55B-203ENST00000553460 AEBP1Q8IUX7 1158 aa22.08■■□□□ 1.13
TMEM55B-203ENST00000553460 GOLGB1Q14789 3259 aaKnown RBP22.06■■□□□ 1.12
TMEM55B-203ENST00000553460 GRIN3BO60391 1043 aa22.06■■□□□ 1.12
TMEM55B-203ENST00000553460 CABP4P57796 275 aa22.06■■□□□ 1.12
TMEM55B-203ENST00000553460 SULT6B1Q6IMI4 303 aa22.06■■□□□ 1.12
TMEM55B-203ENST00000553460 IL13P35225 146 aa22.05■■□□□ 1.12
TMEM55B-203ENST00000553460 MTHFSP49914 203 aa22.05■■□□□ 1.12
TMEM55B-203ENST00000553460 SMIM5Q71RC9 77 aa22.05■■□□□ 1.12
TMEM55B-203ENST00000553460 RBM42Q9BTD8 480 aaKnown RBP22.05■■□□□ 1.12
TMEM55B-203ENST00000553460 COL5A3P25940 1745 aaPredicted RBP22.04■■□□□ 1.12
TMEM55B-203ENST00000553460 YBX3P16989 372 aaKnown RBP eCLIP22.03■■□□□ 1.12
TMEM55B-203ENST00000553460 RTCBQ9Y3I0 505 aaKnown RBP22.02■■□□□ 1.12
TMEM55B-203ENST00000553460 CNTNAP4Q9C0A0 1308 aa22.01■■□□□ 1.11
TMEM55B-203ENST00000553460 SCN11AQ9UI33 1791 aa22■■□□□ 1.11
TMEM55B-203ENST00000553460 SLC4A9Q96Q91 983 aa22■■□□□ 1.11
TMEM55B-203ENST00000553460 ADRA2BP18089 450 aa21.99■■□□□ 1.11
TMEM55B-203ENST00000553460 TRAPPC3LQ5T215 181 aa21.99■■□□□ 1.11
TMEM55B-203ENST00000553460 RC3H1Q5TC82 1133 aaKnown RBP21.99■■□□□ 1.11
TMEM55B-203ENST00000553460 PER1O15534 1290 aaPredicted RBP21.97■■□□□ 1.11
TMEM55B-203ENST00000553460 AKAP4Q5JQC9 854 aa21.97■■□□□ 1.11
TMEM55B-203ENST00000553460 CC2D1BQ5T0F9 858 aaKnown RBP21.97■■□□□ 1.11
TMEM55B-203ENST00000553460 CICQ96RK0 1608 aaPredicted RBP21.97■■□□□ 1.11
TMEM55B-203ENST00000553460 MMP10P09238 476 aa21.96■■□□□ 1.11
TMEM55B-203ENST00000553460 NFATC2IPQ8NCF5 419 aa21.96■■□□□ 1.11
TMEM55B-203ENST00000553460 PTCD1O75127 700 aaKnown RBP21.95■■□□□ 1.1
TMEM55B-203ENST00000553460 RPS6KA4O75676 772 aa21.95■■□□□ 1.1
TMEM55B-203ENST00000553460 NLGN1Q8N2Q7 840 aa21.95■■□□□ 1.1
TMEM55B-203ENST00000553460 NPC1L1Q9UHC9 1359 aa21.95■■□□□ 1.1
TMEM55B-203ENST00000553460 C4AP0C0L4 1744 aa21.94■■□□□ 1.1
TMEM55B-203ENST00000553460 DIAPH1O60610 1272 aaKnown RBP21.94■■□□□ 1.1
TMEM55B-203ENST00000553460 HMOX1P09601 288 aa21.94■■□□□ 1.1
TMEM55B-203ENST00000553460 TJP1Q07157 1748 aa21.94■■□□□ 1.1
TMEM55B-203ENST00000553460 MRC1P22897 1456 aa21.93■■□□□ 1.1
TMEM55B-203ENST00000553460 RFC4P35249 363 aa21.93■■□□□ 1.1
TMEM55B-203ENST00000553460 MYH14Q7Z406 1995 aaKnown RBP21.93■■□□□ 1.1
TMEM55B-203ENST00000553460 ARHGEF1Q92888 912 aaKnown RBP21.93■■□□□ 1.1
TMEM55B-203ENST00000553460 KIF13BQ9NQT8 1826 aa21.92■■□□□ 1.1
TMEM55B-203ENST00000553460 VIRMAQ69YN4 1812 aaKnown RBP21.92■■□□□ 1.1
TMEM55B-203ENST00000553460 GIGYF1O75420 1035 aaPredicted RBP21.91■■□□□ 1.1
TMEM55B-203ENST00000553460 CRKLP46109 303 aaKnown RBP21.91■■□□□ 1.1
TMEM55B-203ENST00000553460 SLC52A2Q9HAB3 445 aa21.91■■□□□ 1.1
TMEM55B-203ENST00000553460 C1QTNF8P60827 252 aa21.9■■□□□ 1.1
TMEM55B-203ENST00000553460 C10orf71Q711Q0 1435 aa21.89■■□□□ 1.1
TMEM55B-203ENST00000553460 ADAMTS7Q9UKP4 1686 aa21.89■■□□□ 1.1
TMEM55B-203ENST00000553460 GYS1P13807 737 aa21.89■■□□□ 1.09
TMEM55B-203ENST00000553460 PXDNLA1KZ92 1463 aa21.89■■□□□ 1.09
TMEM55B-203ENST00000553460 COL3A1P02461 1466 aaPredicted RBP21.89■■□□□ 1.09
TMEM55B-203ENST00000553460 RNMTO43148 476 aaKnown RBP21.88■■□□□ 1.09
TMEM55B-203ENST00000553460 CCDC87Q9NVE4 849 aa21.88■■□□□ 1.09
TMEM55B-203ENST00000553460 WWC3Q9ULE0 1092 aa21.88■■□□□ 1.09
TMEM55B-203ENST00000553460 ATP10DQ9P241 1426 aa21.88■■□□□ 1.09
TMEM55B-203ENST00000553460 KIAA1551Q9HCM1 1747 aa21.87■■□□□ 1.09
TMEM55B-203ENST00000553460 MTHFSDQ2M296 383 aaKnown RBP21.87■■□□□ 1.09
TMEM55B-203ENST00000553460 LGR6Q9HBX8 967 aa21.87■■□□□ 1.09
TMEM55B-203ENST00000553460 PARP3Q9Y6F1 533 aa21.87■■□□□ 1.09
TMEM55B-203ENST00000553460 TGFB2P61812 414 aa21.86■■□□□ 1.09
TMEM55B-203ENST00000553460 CNGB1Q14028 1251 aaPredicted RBP21.86■■□□□ 1.09
TMEM55B-203ENST00000553460 ADCY9O60503 1353 aa21.85■■□□□ 1.09
TMEM55B-203ENST00000553460 N4BP2Q86UW6 1770 aaPredicted RBP21.84■■□□□ 1.09
TMEM55B-203ENST00000553460 USP42Q9H9J4 1324 aaKnown RBP21.84■■□□□ 1.09
TMEM55B-203ENST00000553460 U2SURPO15042 1029 aaKnown RBP21.84■■□□□ 1.09
TMEM55B-203ENST00000553460 KCPQ6ZWJ8 1503 aa21.84■■□□□ 1.09
TMEM55B-203ENST00000553460 SENP3-EIF4A1A0A087X0R7 540 aa21.83■■□□□ 1.09
TMEM55B-203ENST00000553460 INTS5Q6P9B9 1019 aaKnown RBP21.83■■□□□ 1.09
TMEM55B-203ENST00000553460 DNAJC10Q8IXB1 793 aa21.83■■□□□ 1.09
TMEM55B-203ENST00000553460 SLC39A6Q13433 755 aa21.82■■□□□ 1.08
TMEM55B-203ENST00000553460 SRP68Q9UHB9 627 aaKnown RBP21.82■■□□□ 1.08
TMEM55B-203ENST00000553460 UBR2Q8IWV8 1755 aa21.82■■□□□ 1.08
TMEM55B-203ENST00000553460 GAS2L2Q8NHY3 880 aa21.81■■□□□ 1.08
TMEM55B-203ENST00000553460 A0A0G2JLW4 131 aa21.8■■□□□ 1.08
TMEM55B-203ENST00000553460 CFAP53Q96M91 514 aa21.8■■□□□ 1.08
TMEM55B-203ENST00000553460 GPBP1L1Q9HC44 474 aaPredicted RBP21.8■■□□□ 1.08
TMEM55B-203ENST00000553460 SOS1Q07889 1333 aaPredicted RBP21.8■■□□□ 1.08
TMEM55B-203ENST00000553460 ZPR1O75312 459 aa21.79■■□□□ 1.08
TMEM55B-203ENST00000553460 CYP19A1P11511 503 aaPredicted RBP21.79■■□□□ 1.08
TMEM55B-203ENST00000553460 FKBP8Q14318 412 aa21.79■■□□□ 1.08
TMEM55B-203ENST00000553460 VSIG10Q8N0Z9 540 aa21.79■■□□□ 1.08
TMEM55B-203ENST00000553460 BCS1LQ9Y276 419 aa21.79■■□□□ 1.08
TMEM55B-203ENST00000553460 BRCA1P38398 1863 aaKnown RBP21.79■■□□□ 1.08
TMEM55B-203ENST00000553460 DPEP1P16444 411 aa21.78■■□□□ 1.08
TMEM55B-203ENST00000553460 TTC5Q8N0Z6 440 aa21.78■■□□□ 1.08
TMEM55B-203ENST00000553460 COL15A1P39059 1388 aa21.77■■□□□ 1.08
TMEM55B-203ENST00000553460 GNAT3A8MTJ3 354 aa21.77■■□□□ 1.08
TMEM55B-203ENST00000553460 TEFQ10587 303 aa21.77■■□□□ 1.08
TMEM55B-203ENST00000553460 DDR1Q08345 913 aa21.76■■□□□ 1.07
TMEM55B-203ENST00000553460 SIPA1L3O60292 1781 aaPredicted RBP21.75■■□□□ 1.07
TMEM55B-203ENST00000553460 FCHSD2O94868 740 aa21.75■■□□□ 1.07
TMEM55B-203ENST00000553460 USPL1Q5W0Q7 1092 aa21.75■■□□□ 1.07
TMEM55B-203ENST00000553460 ZNF526Q8TF50 670 aaPredicted RBP21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms