RNA–Protein interactions for RNA: ENST00000553396.1

LINC00517-201, long intergenic non-protein coding RNA 517, humanhuman

TSL 3

Gene LINC00517, Length 774 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-201ENST00000553396 C4BP0C0L5 1744 aa13.71□□□□□ -0.21
LINC00517-201ENST00000553396 ERVV-2B6SEH9 535 aa13.71□□□□□ -0.21
LINC00517-201ENST00000553396 CABP4P57796 275 aa13.71□□□□□ -0.21
LINC00517-201ENST00000553396 ATF5Q9Y2D1 282 aaPredicted RBP13.71□□□□□ -0.21
LINC00517-201ENST00000553396 PNPLA7Q6ZV29 1317 aa13.7□□□□□ -0.22
LINC00517-201ENST00000553396 ZEB1P37275 1124 aaPredicted RBP13.7□□□□□ -0.22
LINC00517-201ENST00000553396 MTHFSDQ2M296 383 aaKnown RBP13.7□□□□□ -0.22
LINC00517-201ENST00000553396 PPP1R1BQ9UD71 204 aaPredicted RBP13.7□□□□□ -0.22
LINC00517-201ENST00000553396 LOC102724428A0A0B4J2F2 783 aa13.69□□□□□ -0.22
LINC00517-201ENST00000553396 SIK1P57059 783 aa13.69□□□□□ -0.22
LINC00517-201ENST00000553396 AKAP4Q5JQC9 854 aa13.69□□□□□ -0.22
LINC00517-201ENST00000553396 ATG3Q9NT62 314 aa13.69□□□□□ -0.22
LINC00517-201ENST00000553396 UBR3Q6ZT12 1888 aa13.68□□□□□ -0.22
LINC00517-201ENST00000553396 MTFR1LQ9H019 292 aa13.68□□□□□ -0.22
LINC00517-201ENST00000553396 NUDCQ9Y266 331 aa13.68□□□□□ -0.22
LINC00517-201ENST00000553396 U2AF1L5P0DN76 240 aaPredicted RBP13.67□□□□□ -0.22
LINC00517-201ENST00000553396 PRKAR2BP31323 418 aa13.67□□□□□ -0.22
LINC00517-201ENST00000553396 ATP6V1AP38606 617 aa13.67□□□□□ -0.22
LINC00517-201ENST00000553396 U2AF1Q01081 240 aaKnown RBP eCLIP13.67□□□□□ -0.22
LINC00517-201ENST00000553396 NFATC2IPQ8NCF5 419 aa13.67□□□□□ -0.22
LINC00517-201ENST00000553396 LGR6Q9HBX8 967 aa13.67□□□□□ -0.22
LINC00517-201ENST00000553396 SPINK5Q9NQ38 1064 aaPredicted RBP13.67□□□□□ -0.22
LINC00517-201ENST00000553396 ADAMTS7Q9UKP4 1686 aa13.66□□□□□ -0.22
LINC00517-201ENST00000553396 DSG3P32926 999 aa13.66□□□□□ -0.22
LINC00517-201ENST00000553396 PTGER2P43116 358 aa13.66□□□□□ -0.22
LINC00517-201ENST00000553396 ITPK1Q13572 414 aa13.66□□□□□ -0.22
LINC00517-201ENST00000553396 LINC00116Q8NCU8 138 aa13.66□□□□□ -0.22
LINC00517-201ENST00000553396 AK7Q96M32 723 aa13.66□□□□□ -0.22
LINC00517-201ENST00000553396 RBM42Q9BTD8 480 aaKnown RBP13.66□□□□□ -0.22
LINC00517-201ENST00000553396 RSPH6AQ9H0K4 717 aa13.66□□□□□ -0.22
LINC00517-201ENST00000553396 COL5A3P25940 1745 aaPredicted RBP13.66□□□□□ -0.22
LINC00517-201ENST00000553396 MRC1P22897 1456 aa13.66□□□□□ -0.22
LINC00517-201ENST00000553396 RNMTO43148 476 aaKnown RBP13.65□□□□□ -0.22
LINC00517-201ENST00000553396 COL23A1Q86Y22 540 aaPredicted RBP13.65□□□□□ -0.22
LINC00517-201ENST00000553396 MAP3K5Q99683 1374 aa13.65□□□□□ -0.22
LINC00517-201ENST00000553396 ZNF831Q5JPB2 1677 aa13.64□□□□□ -0.23
LINC00517-201ENST00000553396 PTCD1O75127 700 aaKnown RBP13.64□□□□□ -0.23
LINC00517-201ENST00000553396 CAPN15O75808 1086 aa13.64□□□□□ -0.23
LINC00517-201ENST00000553396 PHF14O94880 888 aa13.64□□□□□ -0.23
LINC00517-201ENST00000553396 SMIM5Q71RC9 77 aa13.64□□□□□ -0.23
LINC00517-201ENST00000553396 AMIGO3Q86WK7 504 aa13.64□□□□□ -0.23
LINC00517-201ENST00000553396 GAS2L2Q8NHY3 880 aa13.64□□□□□ -0.23
LINC00517-201ENST00000553396 PHACTR3Q96KR7 559 aa13.64□□□□□ -0.23
LINC00517-201ENST00000553396 SLC4A9Q96Q91 983 aa13.64□□□□□ -0.23
LINC00517-201ENST00000553396 SLC52A2Q9HAB3 445 aa13.64□□□□□ -0.23
LINC00517-201ENST00000553396 TJP1Q07157 1748 aa13.64□□□□□ -0.23
LINC00517-201ENST00000553396 RALBP1Q15311 655 aa13.63□□□□□ -0.23
LINC00517-201ENST00000553396 SGIP1Q9BQI5 828 aa13.63□□□□□ -0.23
LINC00517-201ENST00000553396 COL24A1Q17RW2 1714 aa13.63□□□□□ -0.23
LINC00517-201ENST00000553396 MYH14Q7Z406 1995 aaKnown RBP13.62□□□□□ -0.23
LINC00517-201ENST00000553396 GNAT3A8MTJ3 354 aa13.62□□□□□ -0.23
LINC00517-201ENST00000553396 GNPATO15228 680 aa13.62□□□□□ -0.23
LINC00517-201ENST00000553396 HMGB2P26583 209 aaKnown RBP13.62□□□□□ -0.23
LINC00517-201ENST00000553396 MSL1Q68DK7 614 aa13.62□□□□□ -0.23
LINC00517-201ENST00000553396 SLC16A10Q8TF71 515 aa13.62□□□□□ -0.23
LINC00517-201ENST00000553396 SIPA1L3O60292 1781 aaPredicted RBP13.62□□□□□ -0.23
LINC00517-201ENST00000553396 FCHSD2O94868 740 aa13.61□□□□□ -0.23
LINC00517-201ENST00000553396 SLC39A6Q13433 755 aa13.61□□□□□ -0.23
LINC00517-201ENST00000553396 UBR2Q8IWV8 1755 aa13.6□□□□□ -0.23
LINC00517-201ENST00000553396 DLG5Q8TDM6 1919 aa13.6□□□□□ -0.23
LINC00517-201ENST00000553396 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.6□□□□□ -0.23
LINC00517-201ENST00000553396 POLD1P28340 1107 aa13.6□□□□□ -0.23
LINC00517-201ENST00000553396 KLHL34Q8N239 644 aa13.6□□□□□ -0.23
LINC00517-201ENST00000553396 IL17REQ8NFR9 667 aa13.6□□□□□ -0.23
LINC00517-201ENST00000553396 ARXQ96QS3 562 aa13.6□□□□□ -0.23
LINC00517-201ENST00000553396 CICQ96RK0 1608 aaPredicted RBP13.6□□□□□ -0.23
LINC00517-201ENST00000553396 MYBBP1AQ9BQG0 1328 aaKnown RBP13.6□□□□□ -0.23
LINC00517-201ENST00000553396 KCPQ6ZWJ8 1503 aa13.59□□□□□ -0.23
LINC00517-201ENST00000553396 SSFA2P28290 1259 aa13.59□□□□□ -0.23
LINC00517-201ENST00000553396 FLAD1Q8NFF5 587 aa13.59□□□□□ -0.23
LINC00517-201ENST00000553396 FHDC1Q9C0D6 1143 aaPredicted RBP13.59□□□□□ -0.23
LINC00517-201ENST00000553396 TEFQ10587 303 aa13.58□□□□□ -0.24
LINC00517-201ENST00000553396 C4AP0C0L4 1744 aa13.58□□□□□ -0.24
LINC00517-201ENST00000553396 NEFMP07197 916 aa13.57□□□□□ -0.24
LINC00517-201ENST00000553396 SYT17Q9BSW7 474 aa13.57□□□□□ -0.24
LINC00517-201ENST00000553396 CNTNAP4Q9C0A0 1308 aa13.57□□□□□ -0.24
LINC00517-201ENST00000553396 CEMIPQ8WUJ3 1361 aa13.57□□□□□ -0.24
LINC00517-201ENST00000553396 CRKLP46109 303 aaKnown RBP13.56□□□□□ -0.24
LINC00517-201ENST00000553396 MCM10Q7L590 875 aa13.56□□□□□ -0.24
LINC00517-201ENST00000553396 DNAJC10Q8IXB1 793 aa13.56□□□□□ -0.24
LINC00517-201ENST00000553396 TTC5Q8N0Z6 440 aa13.56□□□□□ -0.24
LINC00517-201ENST00000553396 RTF1Q92541 710 aaKnown RBP13.56□□□□□ -0.24
LINC00517-201ENST00000553396 RTCBQ9Y3I0 505 aaKnown RBP13.56□□□□□ -0.24
LINC00517-201ENST00000553396 DCTN1Q14203 1278 aa13.55□□□□□ -0.24
LINC00517-201ENST00000553396 PRKRIP1Q9H875 184 aaPredicted RBP13.55□□□□□ -0.24
LINC00517-201ENST00000553396 MAPK8IP3Q9UPT6 1336 aa13.55□□□□□ -0.24
LINC00517-201ENST00000553396 TRAPPC3LQ5T215 181 aa13.54□□□□□ -0.24
LINC00517-201ENST00000553396 RC3H1Q5TC82 1133 aaKnown RBP13.54□□□□□ -0.24
LINC00517-201ENST00000553396 POTEHQ6S545 545 aa13.54□□□□□ -0.24
LINC00517-201ENST00000553396 PLEKHF1Q96S99 279 aa13.54□□□□□ -0.24
LINC00517-201ENST00000553396 ZNF316A6NFI3 1004 aaPredicted RBP13.53□□□□□ -0.24
LINC00517-201ENST00000553396 BTBD11A6QL63 1104 aa13.53□□□□□ -0.24
LINC00517-201ENST00000553396 RPS6KA4O75676 772 aa13.53□□□□□ -0.24
LINC00517-201ENST00000553396 ZNF790Q6PG37 636 aa13.53□□□□□ -0.24
LINC00517-201ENST00000553396 ARHGEF1Q92888 912 aaKnown RBP13.53□□□□□ -0.24
LINC00517-201ENST00000553396 ZNF496Q96IT1 587 aaPredicted RBP13.53□□□□□ -0.24
LINC00517-201ENST00000553396 KCNQ3O43525 872 aa13.52□□□□□ -0.25
LINC00517-201ENST00000553396 INTS5Q6P9B9 1019 aaKnown RBP13.52□□□□□ -0.25
LINC00517-201ENST00000553396 PNNQ9H307 717 aaKnown RBP13.52□□□□□ -0.25
LINC00517-201ENST00000553396 CCDC87Q9NVE4 849 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms