RNA–Protein interactions for RNA: ENST00000553391.2

MTHFD1-203, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-203ENST00000553391 HEG1Q9ULI3 1381 aa11.8□□□□□ -0.52
MTHFD1-203ENST00000553391 LRRC37A3O60309 1634 aa11.8□□□□□ -0.52
MTHFD1-203ENST00000553391 FLIIQ13045 1269 aa11.8□□□□□ -0.52
MTHFD1-203ENST00000553391 CHD1LQ86WJ1 897 aa11.8□□□□□ -0.52
MTHFD1-203ENST00000553391 C1orf115Q9H7X2 142 aa11.8□□□□□ -0.52
MTHFD1-203ENST00000553391 SPG7Q9UQ90 795 aa11.8□□□□□ -0.52
MTHFD1-203ENST00000553391 COL18A1P39060 1754 aa11.79□□□□□ -0.52
MTHFD1-203ENST00000553391 XIRP1Q702N8 1843 aaKnown RBP11.79□□□□□ -0.52
MTHFD1-203ENST00000553391 OVOS2A0A0G2JMS6 1433 aa11.79□□□□□ -0.52
MTHFD1-203ENST00000553391 F6X3S4 739 aa11.79□□□□□ -0.52
MTHFD1-203ENST00000553391 PHKG2P15735 406 aa11.79□□□□□ -0.52
MTHFD1-203ENST00000553391 GIGYF1O75420 1035 aaPredicted RBP11.78□□□□□ -0.52
MTHFD1-203ENST00000553391 CSB-PGBD3P0DP91 1061 aa11.78□□□□□ -0.52
MTHFD1-203ENST00000553391 HDGFL1Q5TGJ6 251 aa11.78□□□□□ -0.52
MTHFD1-203ENST00000553391 ANKRD45Q5TZF3 282 aa11.78□□□□□ -0.52
MTHFD1-203ENST00000553391 IFNL2Q8IZJ0 200 aa11.78□□□□□ -0.52
MTHFD1-203ENST00000553391 MEIS3Q99687 375 aa11.78□□□□□ -0.52
MTHFD1-203ENST00000553391 LMO7Q8WWI1 1683 aa11.78□□□□□ -0.52
MTHFD1-203ENST00000553391 CAMTA1Q9Y6Y1 1673 aa11.78□□□□□ -0.52
MTHFD1-203ENST00000553391 ABCC6O95255 1503 aa11.77□□□□□ -0.52
MTHFD1-203ENST00000553391 SEC24BO95487 1268 aa11.77□□□□□ -0.53
MTHFD1-203ENST00000553391 CEP85Q6P2H3 762 aa11.77□□□□□ -0.53
MTHFD1-203ENST00000553391 NECTIN2Q92692 538 aa11.77□□□□□ -0.53
MTHFD1-203ENST00000553391 PHAXQ9H814 394 aaKnown RBP11.77□□□□□ -0.53
MTHFD1-203ENST00000553391 RGPD2P0DJD1 1756 aa11.77□□□□□ -0.53
MTHFD1-203ENST00000553391 CYP27B1O15528 508 aa11.76□□□□□ -0.53
MTHFD1-203ENST00000553391 EIF2S2P20042 333 aaKnown RBP11.76□□□□□ -0.53
MTHFD1-203ENST00000553391 ATP8B2P98198 1209 aa11.76□□□□□ -0.53
MTHFD1-203ENST00000553391 SLC4A10Q6U841 1118 aa11.76□□□□□ -0.53
MTHFD1-203ENST00000553391 NPM2Q86SE8 214 aaKnown RBP11.76□□□□□ -0.53
MTHFD1-203ENST00000553391 SLC52A2Q9HAB3 445 aa11.76□□□□□ -0.53
MTHFD1-203ENST00000553391 ZBTB47Q9UFB7 747 aaPredicted RBP11.76□□□□□ -0.53
MTHFD1-203ENST00000553391 HSP90AB1P08238 724 aaKnown RBP11.75□□□□□ -0.53
MTHFD1-203ENST00000553391 GNAI3P08754 354 aa11.75□□□□□ -0.53
MTHFD1-203ENST00000553391 FKBP5Q13451 457 aaPredicted RBP11.75□□□□□ -0.53
MTHFD1-203ENST00000553391 CARD10Q9BWT7 1032 aa11.75□□□□□ -0.53
MTHFD1-203ENST00000553391 LNPKQ9C0E8 428 aa11.75□□□□□ -0.53
MTHFD1-203ENST00000553391 GNAI2P04899 355 aa11.74□□□□□ -0.53
MTHFD1-203ENST00000553391 NFATC2IPQ8NCF5 419 aa11.74□□□□□ -0.53
MTHFD1-203ENST00000553391 DCAF5Q96JK2 942 aa11.74□□□□□ -0.53
MTHFD1-203ENST00000553391 USP44Q9H0E7 712 aa11.74□□□□□ -0.53
MTHFD1-203ENST00000553391 PRDM11Q9NQV5 511 aa11.74□□□□□ -0.53
MTHFD1-203ENST00000553391 DBF4Q9UBU7 674 aaPredicted RBP11.74□□□□□ -0.53
MTHFD1-203ENST00000553391 NOP58Q9Y2X3 529 aaKnown RBP11.74□□□□□ -0.53
MTHFD1-203ENST00000553391 WDR17Q8IZU2 1322 aa11.74□□□□□ -0.53
MTHFD1-203ENST00000553391 NKX1-1Q15270 411 aaPredicted RBP11.73□□□□□ -0.53
MTHFD1-203ENST00000553391 ZNF790Q6PG37 636 aa11.73□□□□□ -0.53
MTHFD1-203ENST00000553391 DDRGK1Q96HY6 314 aa11.73□□□□□ -0.53
MTHFD1-203ENST00000553391 ANP32EQ9BTT0 268 aa11.73□□□□□ -0.53
MTHFD1-203ENST00000553391 CHPF2Q9P2E5 772 aa11.73□□□□□ -0.53
MTHFD1-203ENST00000553391 RGPD5Q99666 1765 aa11.72□□□□□ -0.53
MTHFD1-203ENST00000553391 ATP10DQ9P241 1426 aa11.72□□□□□ -0.53
MTHFD1-203ENST00000553391 PDIA6Q15084 440 aa11.72□□□□□ -0.53
MTHFD1-203ENST00000553391 BEND3Q5T5X7 828 aa11.72□□□□□ -0.53
MTHFD1-203ENST00000553391 ZCRB1Q8TBF4 217 aaKnown RBP11.72□□□□□ -0.53
MTHFD1-203ENST00000553391 ADAMTS7Q9UKP4 1686 aa11.71□□□□□ -0.53
MTHFD1-203ENST00000553391 MEGF6O75095 1541 aa11.71□□□□□ -0.53
MTHFD1-203ENST00000553391 KDM6AO15550 1401 aaPredicted RBP11.71□□□□□ -0.53
MTHFD1-203ENST00000553391 PRAMEF22A3QJZ6 481 aa11.71□□□□□ -0.53
MTHFD1-203ENST00000553391 PI4KAP2A4QPH2 592 aa11.71□□□□□ -0.53
MTHFD1-203ENST00000553391 HMMRO75330 724 aa11.71□□□□□ -0.53
MTHFD1-203ENST00000553391 SLC39A6Q13433 755 aa11.71□□□□□ -0.53
MTHFD1-203ENST00000553391 BMP2KLQ5H9B9 411 aa11.71□□□□□ -0.53
MTHFD1-203ENST00000553391 KSR2Q6VAB6 950 aa11.71□□□□□ -0.53
MTHFD1-203ENST00000553391 TOM1L2Q6ZVM7 507 aa11.71□□□□□ -0.53
MTHFD1-203ENST00000553391 PLEKHM2Q8IWE5 1019 aa11.71□□□□□ -0.53
MTHFD1-203ENST00000553391 PI4KAP1Q8N8J0 262 aa11.71□□□□□ -0.53
MTHFD1-203ENST00000553391 DNAAF4Q8WXU2 420 aa11.71□□□□□ -0.53
MTHFD1-203ENST00000553391 SRCIN1Q9C0H9 1055 aa11.71□□□□□ -0.53
MTHFD1-203ENST00000553391 DDX21Q9NR30 783 aaKnown RBP eCLIP11.71□□□□□ -0.53
MTHFD1-203ENST00000553391 HYPKQ9NX55 129 aa11.71□□□□□ -0.53
MTHFD1-203ENST00000553391 CRYBG1Q9Y4K1 1723 aa11.71□□□□□ -0.54
MTHFD1-203ENST00000553391 FAM208AQ9UK61 1670 aaKnown RBP11.71□□□□□ -0.54
MTHFD1-203ENST00000553391 ERVV-2B6SEH9 535 aa11.7□□□□□ -0.54
MTHFD1-203ENST00000553391 ALDH1L1O75891 902 aa11.7□□□□□ -0.54
MTHFD1-203ENST00000553391 EVA1CP58658 441 aa11.7□□□□□ -0.54
MTHFD1-203ENST00000553391 C16orf71Q8IYS4 520 aaPredicted RBP11.7□□□□□ -0.54
MTHFD1-203ENST00000553391 KDM3BQ7LBC6 1761 aa11.69□□□□□ -0.54
MTHFD1-203ENST00000553391 ANXA1P04083 346 aa11.69□□□□□ -0.54
MTHFD1-203ENST00000553391 CABP4P57796 275 aa11.69□□□□□ -0.54
MTHFD1-203ENST00000553391 PROSER3Q2NL68 480 aa11.69□□□□□ -0.54
MTHFD1-203ENST00000553391 LARP1Q6PKG0 1096 aaKnown RBP11.69□□□□□ -0.54
MTHFD1-203ENST00000553391 CACNA1FO60840 1977 aa11.68□□□□□ -0.54
MTHFD1-203ENST00000553391 SNRPA1P09661 255 aaKnown RBP11.68□□□□□ -0.54
MTHFD1-203ENST00000553391 IL2RBP14784 551 aa11.68□□□□□ -0.54
MTHFD1-203ENST00000553391 SSH3Q8TE77 659 aa11.68□□□□□ -0.54
MTHFD1-203ENST00000553391 ZNF496Q96IT1 587 aaPredicted RBP11.68□□□□□ -0.54
MTHFD1-203ENST00000553391 TBC1D32Q96NH3 1257 aa11.68□□□□□ -0.54
MTHFD1-203ENST00000553391 USP16Q9Y5T5 823 aa11.68□□□□□ -0.54
MTHFD1-203ENST00000553391 PXDNLA1KZ92 1463 aa11.68□□□□□ -0.54
MTHFD1-203ENST00000553391 ADCY9O60503 1353 aa11.67□□□□□ -0.54
MTHFD1-203ENST00000553391 PNMA6EA0A0J9YXQ4 647 aa11.67□□□□□ -0.54
MTHFD1-203ENST00000553391 UBTFL1P0CB47 393 aaPredicted RBP11.67□□□□□ -0.54
MTHFD1-203ENST00000553391 POLA2Q14181 598 aa11.67□□□□□ -0.54
MTHFD1-203ENST00000553391 ERICH6Q7L0X2 663 aa11.67□□□□□ -0.54
MTHFD1-203ENST00000553391 LRP10Q7Z4F1 713 aa11.67□□□□□ -0.54
MTHFD1-203ENST00000553391 FMNL2Q96PY5 1086 aa11.67□□□□□ -0.54
MTHFD1-203ENST00000553391 OSBPL3Q9H4L5 887 aa11.67□□□□□ -0.54
MTHFD1-203ENST00000553391 LRRFIP2Q9Y608 721 aaKnown RBP11.67□□□□□ -0.54
MTHFD1-203ENST00000553391 COL5A2P05997 1499 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms