RNA–Protein interactions for RNA: ENST00000553192.5

SNRPF-205, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 4 BASIC

Gene SNRPF, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-205ENST00000553192 NLGN1Q8N2Q7 840 aa16.9■□□□□ 0.3
SNRPF-205ENST00000553192 RAPGEF4Q8WZA2 1011 aa16.9■□□□□ 0.3
SNRPF-205ENST00000553192 CCDC87Q9NVE4 849 aa16.9■□□□□ 0.3
SNRPF-205ENST00000553192 ARFGEF1Q9Y6D6 1849 aa16.89■□□□□ 0.29
SNRPF-205ENST00000553192 AMPHP49418 695 aa16.89■□□□□ 0.29
SNRPF-205ENST00000553192 TMF1P82094 1093 aa16.89■□□□□ 0.29
SNRPF-205ENST00000553192 PIM2Q9P1W9 311 aa16.89■□□□□ 0.29
SNRPF-205ENST00000553192 VEGFAP15692 232 aaPredicted RBP16.88■□□□□ 0.29
SNRPF-205ENST00000553192 TATP17735 454 aaPredicted RBP16.88■□□□□ 0.29
SNRPF-205ENST00000553192 HDGFL2Q7Z4V5 671 aaPredicted RBP16.88■□□□□ 0.29
SNRPF-205ENST00000553192 TMC1Q8TDI8 760 aa16.88■□□□□ 0.29
SNRPF-205ENST00000553192 MKRN1Q9UHC7 482 aaKnown RBP16.88■□□□□ 0.29
SNRPF-205ENST00000553192 A0A1W2PP64 1363 aa16.88■□□□□ 0.29
SNRPF-205ENST00000553192 C4AP0C0L4 1744 aa16.87■□□□□ 0.29
SNRPF-205ENST00000553192 POTECB2RU33 542 aa16.87■□□□□ 0.29
SNRPF-205ENST00000553192 GYS1P13807 737 aa16.87■□□□□ 0.29
SNRPF-205ENST00000553192 DALRD3Q5D0E6 543 aaKnown RBP16.87■□□□□ 0.29
SNRPF-205ENST00000553192 GLTPD2A6NH11 291 aa16.86■□□□□ 0.29
SNRPF-205ENST00000553192 ASAP1Q9ULH1 1129 aa16.86■□□□□ 0.29
SNRPF-205ENST00000553192 ITGB4P16144 1822 aa16.86■□□□□ 0.29
SNRPF-205ENST00000553192 KDM6AO15550 1401 aaPredicted RBP16.86■□□□□ 0.29
SNRPF-205ENST00000553192 ATP6V1AP38606 617 aa16.85■□□□□ 0.29
SNRPF-205ENST00000553192 RASSF7Q02833 373 aa16.85■□□□□ 0.29
SNRPF-205ENST00000553192 TRAPPC3LQ5T215 181 aa16.85■□□□□ 0.29
SNRPF-205ENST00000553192 ARHGEF1Q92888 912 aaKnown RBP16.85■□□□□ 0.29
SNRPF-205ENST00000553192 ABHD8Q96I13 439 aa16.85■□□□□ 0.29
SNRPF-205ENST00000553192 ZC3H4Q9UPT8 1303 aaKnown RBP16.85■□□□□ 0.29
SNRPF-205ENST00000553192 SBF1O95248 1867 aa16.84■□□□□ 0.29
SNRPF-205ENST00000553192 NKX1-1Q15270 411 aaPredicted RBP16.84■□□□□ 0.29
SNRPF-205ENST00000553192 CREBZFQ9NS37 354 aa16.84■□□□□ 0.29
SNRPF-205ENST00000553192 PARP3Q9Y6F1 533 aa16.84■□□□□ 0.29
SNRPF-205ENST00000553192 CHRNA5P30532 468 aa16.83■□□□□ 0.28
SNRPF-205ENST00000553192 RTCBQ9Y3I0 505 aaKnown RBP16.83■□□□□ 0.28
SNRPF-205ENST00000553192 RTL1A6NKG5 1358 aa16.82■□□□□ 0.28
SNRPF-205ENST00000553192 CTCFP49711 727 aaPredicted RBP16.82■□□□□ 0.28
SNRPF-205ENST00000553192 RRS1Q15050 365 aaKnown RBP16.82■□□□□ 0.28
SNRPF-205ENST00000553192 COG3Q96JB2 828 aa16.82■□□□□ 0.28
SNRPF-205ENST00000553192 SLC4A9Q96Q91 983 aa16.82■□□□□ 0.28
SNRPF-205ENST00000553192 L3MBTL2Q969R5 705 aa16.81■□□□□ 0.28
SNRPF-205ENST00000553192 ATG3Q9NT62 314 aa16.81■□□□□ 0.28
SNRPF-205ENST00000553192 TERF2IPQ9NYB0 399 aa16.81■□□□□ 0.28
SNRPF-205ENST00000553192 ROCK2O75116 1388 aaKnown RBP16.8■□□□□ 0.28
SNRPF-205ENST00000553192 CNTNAP1P78357 1384 aa16.8■□□□□ 0.28
SNRPF-205ENST00000553192 RGS19P49795 217 aa16.8■□□□□ 0.28
SNRPF-205ENST00000553192 LBX1P52954 281 aa16.8■□□□□ 0.28
SNRPF-205ENST00000553192 KDRP35968 1356 aa16.79■□□□□ 0.28
SNRPF-205ENST00000553192 ADRA2BP18089 450 aa16.79■□□□□ 0.28
SNRPF-205ENST00000553192 MLLT1Q03111 559 aaPredicted RBP16.79■□□□□ 0.28
SNRPF-205ENST00000553192 DDR1Q08345 913 aa16.79■□□□□ 0.28
SNRPF-205ENST00000553192 HSP90AB2PQ58FF8 381 aa16.79■□□□□ 0.28
SNRPF-205ENST00000553192 POTEDQ86YR6 584 aa16.79■□□□□ 0.28
SNRPF-205ENST00000553192 TMOD3Q9NYL9 352 aa16.78■□□□□ 0.28
SNRPF-205ENST00000553192 LMNB1P20700 586 aa16.77■□□□□ 0.28
SNRPF-205ENST00000553192 WBP1LQ9NX94 342 aa16.77■□□□□ 0.28
SNRPF-205ENST00000553192 RPS6KA4O75676 772 aa16.76■□□□□ 0.27
SNRPF-205ENST00000553192 POTEIP0CG38 1075 aa16.76■□□□□ 0.27
SNRPF-205ENST00000553192 POTEJP0CG39 1038 aa16.76■□□□□ 0.27
SNRPF-205ENST00000553192 RFC4P35249 363 aa16.76■□□□□ 0.27
SNRPF-205ENST00000553192 VEGFBP49765 207 aa16.76■□□□□ 0.27
SNRPF-205ENST00000553192 RC3H1Q5TC82 1133 aaKnown RBP16.76■□□□□ 0.27
SNRPF-205ENST00000553192 AIDAQ96BJ3 306 aa16.76■□□□□ 0.27
SNRPF-205ENST00000553192 SMG6Q86US8 1419 aaKnown RBP16.76■□□□□ 0.27
SNRPF-205ENST00000553192 INSRP06213 1382 aa16.76■□□□□ 0.27
SNRPF-205ENST00000553192 CNTNAP4Q9C0A0 1308 aa16.75■□□□□ 0.27
SNRPF-205ENST00000553192 HSPA8P11142 646 aaKnown RBP16.75■□□□□ 0.27
SNRPF-205ENST00000553192 FKBP8Q14318 412 aa16.75■□□□□ 0.27
SNRPF-205ENST00000553192 CHADLQ6NUI6 762 aa16.75■□□□□ 0.27
SNRPF-205ENST00000553192 SRP68Q9UHB9 627 aaKnown RBP16.74■□□□□ 0.27
SNRPF-205ENST00000553192 NFKBIEO00221 500 aa16.73■□□□□ 0.27
SNRPF-205ENST00000553192 PASKQ96RG2 1323 aa16.72■□□□□ 0.27
SNRPF-205ENST00000553192 NCAPD2Q15021 1401 aa16.72■□□□□ 0.27
SNRPF-205ENST00000553192 POLRMTO00411 1230 aaKnown RBP16.72■□□□□ 0.27
SNRPF-205ENST00000553192 CCDC85CA6NKD9 419 aa16.71■□□□□ 0.27
SNRPF-205ENST00000553192 PHKG2P15735 406 aa16.7■□□□□ 0.26
SNRPF-205ENST00000553192 TM4SF1P30408 202 aa16.7■□□□□ 0.26
SNRPF-205ENST00000553192 PUS7Q96PZ0 661 aaKnown RBP16.7■□□□□ 0.26
SNRPF-205ENST00000553192 GGNBP2Q9H3C7 697 aa16.7■□□□□ 0.26
SNRPF-205ENST00000553192 SPG7Q9UQ90 795 aa16.7■□□□□ 0.26
SNRPF-205ENST00000553192 TIAM2Q8IVF5 1701 aa16.7■□□□□ 0.26
SNRPF-205ENST00000553192 USP42Q9H9J4 1324 aaKnown RBP16.7■□□□□ 0.26
SNRPF-205ENST00000553192 FYB1O15117 783 aa16.69■□□□□ 0.26
SNRPF-205ENST00000553192 RBM42Q9BTD8 480 aaKnown RBP16.69■□□□□ 0.26
SNRPF-205ENST00000553192 COL5A3P25940 1745 aaPredicted RBP16.68■□□□□ 0.26
SNRPF-205ENST00000553192 FLT4P35916 1363 aa16.68■□□□□ 0.26
SNRPF-205ENST00000553192 DPY19L2Q6NUT2 758 aa16.68■□□□□ 0.26
SNRPF-205ENST00000553192 ZNF831Q5JPB2 1677 aa16.68■□□□□ 0.26
SNRPF-205ENST00000553192 MYH14Q7Z406 1995 aaKnown RBP16.68■□□□□ 0.26
SNRPF-205ENST00000553192 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.67■□□□□ 0.26
SNRPF-205ENST00000553192 VIRMAQ69YN4 1812 aaKnown RBP16.66■□□□□ 0.26
SNRPF-205ENST00000553192 IFNL2Q8IZJ0 200 aa16.66■□□□□ 0.26
SNRPF-205ENST00000553192 TONSLQ96HA7 1378 aa16.65■□□□□ 0.26
SNRPF-205ENST00000553192 TMEM88BA6NKF7 163 aa16.65■□□□□ 0.26
SNRPF-205ENST00000553192 ITGBL1O95965 494 aaPredicted RBP16.65■□□□□ 0.26
SNRPF-205ENST00000553192 KIF24Q5T7B8 1368 aa16.64■□□□□ 0.26
SNRPF-205ENST00000553192 DDNO94850 711 aaPredicted RBP16.64■□□□□ 0.25
SNRPF-205ENST00000553192 CRKLP46109 303 aaKnown RBP16.64■□□□□ 0.25
SNRPF-205ENST00000553192 TTLL6Q8N841 843 aa16.64■□□□□ 0.25
SNRPF-205ENST00000553192 RASSF10A6NK89 507 aa16.62■□□□□ 0.25
SNRPF-205ENST00000553192 ERFEQ4G0M1 354 aa16.62■□□□□ 0.25
SNRPF-205ENST00000553192 SIN3AQ96ST3 1273 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms