RNA–Protein interactions for RNA: ENST00000553055.1

PFKM-231, Transcript of phosphofructokinase, muscle, humanhuman

TSL 5

Gene PFKM, Length 289 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKM-231ENST00000553055 SFI1A8K8P3 1242 aa10.01□□□□□ -0.81
PFKM-231ENST00000553055 BMS1Q14692 1282 aaKnown RBP10.01□□□□□ -0.81
PFKM-231ENST00000553055 SWT1Q5T5J6 900 aaKnown RBP10.01□□□□□ -0.81
PFKM-231ENST00000553055 GPKOWQ92917 476 aaPredicted RBP eCLIP10.01□□□□□ -0.81
PFKM-231ENST00000553055 MRFAP1L1Q96HT8 127 aa10.01□□□□□ -0.81
PFKM-231ENST00000553055 CYLDQ9NQC7 956 aa10.01□□□□□ -0.81
PFKM-231ENST00000553055 IFT140Q96RY7 1462 aa10.01□□□□□ -0.81
PFKM-231ENST00000553055 EHHADHQ08426 723 aa10□□□□□ -0.81
PFKM-231ENST00000553055 FKBP5Q13451 457 aaPredicted RBP10□□□□□ -0.81
PFKM-231ENST00000553055 JAZF1Q86VZ6 243 aa10□□□□□ -0.81
PFKM-231ENST00000553055 ZNF654Q8IZM8 581 aa10□□□□□ -0.81
PFKM-231ENST00000553055 ARMC2Q8NEN0 867 aa10□□□□□ -0.81
PFKM-231ENST00000553055 F12P00748 615 aaPredicted RBP9.99□□□□□ -0.81
PFKM-231ENST00000553055 CFHP08603 1231 aa9.99□□□□□ -0.81
PFKM-231ENST00000553055 WEE1P30291 646 aa9.99□□□□□ -0.81
PFKM-231ENST00000553055 DSC3Q14574 896 aa9.99□□□□□ -0.81
PFKM-231ENST00000553055 OXLD1Q5BKU9 147 aa9.99□□□□□ -0.81
PFKM-231ENST00000553055 PDXDC2PQ6P474 469 aa9.99□□□□□ -0.81
PFKM-231ENST00000553055 MORC4Q8TE76 937 aa9.99□□□□□ -0.81
PFKM-231ENST00000553055 COL4A3BPQ9Y5P4 624 aa9.99□□□□□ -0.81
PFKM-231ENST00000553055 ERCC6L2Q5T890 1561 aa9.99□□□□□ -0.81
PFKM-231ENST00000553055 PSDA5PKW4 1024 aaPredicted RBP9.98□□□□□ -0.81
PFKM-231ENST00000553055 NUDT7P0C024 238 aa9.98□□□□□ -0.81
PFKM-231ENST00000553055 TAF7LQ5H9L4 462 aa9.98□□□□□ -0.81
PFKM-231ENST00000553055 ILDR2Q71H61 639 aa9.98□□□□□ -0.81
PFKM-231ENST00000553055 VTI1AQ96AJ9 217 aa9.98□□□□□ -0.81
PFKM-231ENST00000553055 SLC52A1Q9NWF4 448 aa9.98□□□□□ -0.81
PFKM-231ENST00000553055 DMGDHQ9UI17 866 aaKnown RBP9.98□□□□□ -0.81
PFKM-231ENST00000553055 PARNO95453 639 aaKnown RBP9.97□□□□□ -0.81
PFKM-231ENST00000553055 NBPF14Q5TI25 921 aa9.96□□□□□ -0.82
PFKM-231ENST00000553055 ALKBH2Q6NS38 261 aa9.96□□□□□ -0.82
PFKM-231ENST00000553055 MRPL42Q9Y6G3 142 aaKnown RBP9.96□□□□□ -0.82
PFKM-231ENST00000553055 CHD1O14646 1710 aa9.96□□□□□ -0.82
PFKM-231ENST00000553055 M0R2N6 131 aa9.95□□□□□ -0.82
PFKM-231ENST00000553055 XRCC5P13010 732 aaKnown RBP9.95□□□□□ -0.82
PFKM-231ENST00000553055 MPSTP25325 297 aa9.95□□□□□ -0.82
PFKM-231ENST00000553055 NAA30Q147X3 362 aaPredicted RBP9.95□□□□□ -0.82
PFKM-231ENST00000553055 RNF20Q5VTR2 975 aa9.95□□□□□ -0.82
PFKM-231ENST00000553055 ALG1LQ6GMV1 187 aa9.95□□□□□ -0.82
PFKM-231ENST00000553055 CRELD1Q96HD1 420 aa9.95□□□□□ -0.82
PFKM-231ENST00000553055 PRDM16Q9HAZ2 1276 aa9.95□□□□□ -0.82
PFKM-231ENST00000553055 MAP10Q9P2G4 905 aa9.95□□□□□ -0.82
PFKM-231ENST00000553055 FOXO3O43524 673 aa9.94□□□□□ -0.82
PFKM-231ENST00000553055 AAMPQ13685 434 aa9.94□□□□□ -0.82
PFKM-231ENST00000553055 KMT5BQ4FZB7 885 aa9.94□□□□□ -0.82
PFKM-231ENST00000553055 FILIP1Q7Z7B0 1213 aa9.94□□□□□ -0.82
PFKM-231ENST00000553055 CKAP2LQ8IYA6 745 aa9.94□□□□□ -0.82
PFKM-231ENST00000553055 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.94□□□□□ -0.82
PFKM-231ENST00000553055 TMX1Q9H3N1 280 aa9.94□□□□□ -0.82
PFKM-231ENST00000553055 CHPF2Q9P2E5 772 aa9.94□□□□□ -0.82
PFKM-231ENST00000553055 DDX41Q9UJV9 622 aaKnown RBP9.94□□□□□ -0.82
PFKM-231ENST00000553055 EMILIN1Q9Y6C2 1016 aa9.94□□□□□ -0.82
PFKM-231ENST00000553055 CFTRP13569 1480 aa9.93□□□□□ -0.82
PFKM-231ENST00000553055 CTHP32929 405 aa9.93□□□□□ -0.82
PFKM-231ENST00000553055 PTPRNQ16849 979 aa9.93□□□□□ -0.82
PFKM-231ENST00000553055 TMED8Q6PL24 325 aaPredicted RBP9.93□□□□□ -0.82
PFKM-231ENST00000553055 CAPN12Q6ZSI9 719 aa9.93□□□□□ -0.82
PFKM-231ENST00000553055 MCF2L2Q86YR7 1114 aa9.93□□□□□ -0.82
PFKM-231ENST00000553055 ALKBH8Q96BT7 664 aaKnown RBP9.93□□□□□ -0.82
PFKM-231ENST00000553055 PCDH12Q9NPG4 1184 aa9.93□□□□□ -0.82
PFKM-231ENST00000553055 EIF4G3O43432 1585 aaKnown RBP9.92□□□□□ -0.82
PFKM-231ENST00000553055 HECW2Q9P2P5 1572 aa9.92□□□□□ -0.82
PFKM-231ENST00000553055 CLASP1Q7Z460 1538 aa9.92□□□□□ -0.82
PFKM-231ENST00000553055 CCDC194A0A1B0GVG4 234 aa9.92□□□□□ -0.82
PFKM-231ENST00000553055 ENPP3O14638 875 aa9.92□□□□□ -0.82
PFKM-231ENST00000553055 DNAJC6O75061 913 aa9.92□□□□□ -0.82
PFKM-231ENST00000553055 LGR5O75473 907 aa9.92□□□□□ -0.82
PFKM-231ENST00000553055 GNA15P30679 374 aa9.92□□□□□ -0.82
PFKM-231ENST00000553055 NBPF6Q5VWK0 638 aa9.92□□□□□ -0.82
PFKM-231ENST00000553055 USP48Q86UV5 1035 aa9.92□□□□□ -0.82
PFKM-231ENST00000553055 NBPF4Q96M43 638 aa9.92□□□□□ -0.82
PFKM-231ENST00000553055 COLQQ9Y215 455 aaPredicted RBP9.92□□□□□ -0.82
PFKM-231ENST00000553055 K7ELQ4 463 aaPredicted RBP9.91□□□□□ -0.82
PFKM-231ENST00000553055 PPP1R12AO14974 1030 aaPredicted RBP9.91□□□□□ -0.82
PFKM-231ENST00000553055 FGRP09769 529 aa9.91□□□□□ -0.82
PFKM-231ENST00000553055 IGFBP4P22692 258 aa9.91□□□□□ -0.82
PFKM-231ENST00000553055 TSGA10IPQ3SY00 556 aa9.91□□□□□ -0.82
PFKM-231ENST00000553055 CCAR1Q8IX12 1150 aaKnown RBP9.91□□□□□ -0.82
PFKM-231ENST00000553055 TSEN2Q8NCE0 465 aaKnown RBP9.91□□□□□ -0.82
PFKM-231ENST00000553055 ADAM32Q8TC27 787 aa9.91□□□□□ -0.82
PFKM-231ENST00000553055 FRMD6Q96NE9 622 aa9.91□□□□□ -0.82
PFKM-231ENST00000553055 CCDC85AQ96PX6 553 aaPredicted RBP9.91□□□□□ -0.82
PFKM-231ENST00000553055 USB1Q9BQ65 265 aaKnown RBP9.91□□□□□ -0.82
PFKM-231ENST00000553055 ARHGAP9Q9BRR9 750 aa9.91□□□□□ -0.82
PFKM-231ENST00000553055 SPC25Q9HBM1 224 aa9.91□□□□□ -0.82
PFKM-231ENST00000553055 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.91□□□□□ -0.82
PFKM-231ENST00000553055 IFT57Q9NWB7 429 aa9.91□□□□□ -0.82
PFKM-231ENST00000553055 FAN1Q9Y2M0 1017 aa9.91□□□□□ -0.82
PFKM-231ENST00000553055 PRKAB1Q9Y478 270 aa9.91□□□□□ -0.82
PFKM-231ENST00000553055 PCDHGA11Q9Y5H2 935 aa9.91□□□□□ -0.82
PFKM-231ENST00000553055 GAPVD1Q14C86 1478 aa9.91□□□□□ -0.82
PFKM-231ENST00000553055 USP4Q13107 963 aa9.9□□□□□ -0.82
PFKM-231ENST00000553055 ZNF394Q53GI3 561 aa9.9□□□□□ -0.82
PFKM-231ENST00000553055 MORN1Q5T089 497 aa9.9□□□□□ -0.82
PFKM-231ENST00000553055 HS2ST1Q7LGA3 356 aa9.9□□□□□ -0.82
PFKM-231ENST00000553055 ZBTB33Q86T24 672 aa9.9□□□□□ -0.82
PFKM-231ENST00000553055 DZIP3Q86Y13 1208 aaKnown RBP9.9□□□□□ -0.82
PFKM-231ENST00000553055 CCDC136Q96JN2 1154 aa9.9□□□□□ -0.82
PFKM-231ENST00000553055 FAM129BQ96TA1 746 aa9.9□□□□□ -0.82
PFKM-231ENST00000553055 WWC3Q9ULE0 1092 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms