RNA–Protein interactions for RNA: ENST00000553038.5

ACTR6-213, Transcript of ARP6 actin related protein 6 homolog, humanhuman

TSL 1 (best)

Gene ACTR6, Length 2,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR6-213ENST00000553038 BABAM1Q9NWV8 329 aa17.91■□□□□ 0.46
ACTR6-213ENST00000553038 BRPF1P55201 1214 aaPredicted RBP17.9■□□□□ 0.46
ACTR6-213ENST00000553038 ZCRB1Q8TBF4 217 aaKnown RBP17.9■□□□□ 0.46
ACTR6-213ENST00000553038 PCDHB15Q9Y5E8 787 aa17.89■□□□□ 0.46
ACTR6-213ENST00000553038 OVOS2A0A0G2JMS6 1433 aa17.89■□□□□ 0.45
ACTR6-213ENST00000553038 PARP4Q9UKK3 1724 aaKnown RBP17.89■□□□□ 0.45
ACTR6-213ENST00000553038 HSP90AB1P08238 724 aaKnown RBP17.89■□□□□ 0.45
ACTR6-213ENST00000553038 TMEM57Q8N5G2 664 aa17.89■□□□□ 0.45
ACTR6-213ENST00000553038 PCDH11XQ9BZA7 1347 aa17.89■□□□□ 0.45
ACTR6-213ENST00000553038 PCDH11YQ9BZA8 1340 aa17.89■□□□□ 0.45
ACTR6-213ENST00000553038 ITPRIPQ8IWB1 547 aa17.88■□□□□ 0.45
ACTR6-213ENST00000553038 DDX54Q8TDD1 881 aaKnown RBP17.88■□□□□ 0.45
ACTR6-213ENST00000553038 NECTIN2Q92692 538 aa17.88■□□□□ 0.45
ACTR6-213ENST00000553038 CYP27B1O15528 508 aa17.87■□□□□ 0.45
ACTR6-213ENST00000553038 STK31Q9BXU1 1019 aa17.87■□□□□ 0.45
ACTR6-213ENST00000553038 CCDC9Q9Y3X0 531 aaKnown RBP17.87■□□□□ 0.45
ACTR6-213ENST00000553038 PLEKHG2Q9H7P9 1386 aa17.87■□□□□ 0.45
ACTR6-213ENST00000553038 DCAF5Q96JK2 942 aa17.86■□□□□ 0.45
ACTR6-213ENST00000553038 JCADQ9P266 1359 aa17.86■□□□□ 0.45
ACTR6-213ENST00000553038 PKD1L3Q7Z443 1732 aa17.85■□□□□ 0.45
ACTR6-213ENST00000553038 MSH5O43196 834 aa17.85■□□□□ 0.45
ACTR6-213ENST00000553038 KCNQ3O43525 872 aa17.84■□□□□ 0.45
ACTR6-213ENST00000553038 SLC4A2P04920 1241 aa17.84■□□□□ 0.45
ACTR6-213ENST00000553038 CABP4P57796 275 aa17.84■□□□□ 0.45
ACTR6-213ENST00000553038 CCDC30Q5VVM6 783 aa17.84■□□□□ 0.45
ACTR6-213ENST00000553038 SLC52A2Q9HAB3 445 aa17.84■□□□□ 0.45
ACTR6-213ENST00000553038 NFATC2IPQ8NCF5 419 aa17.84■□□□□ 0.45
ACTR6-213ENST00000553038 API5Q9BZZ5 524 aaKnown RBP17.84■□□□□ 0.45
ACTR6-213ENST00000553038 VIRMAQ69YN4 1812 aaKnown RBP17.84■□□□□ 0.45
ACTR6-213ENST00000553038 KDM6AO15550 1401 aaPredicted RBP17.84■□□□□ 0.45
ACTR6-213ENST00000553038 PLCH1Q4KWH8 1693 aa17.83■□□□□ 0.45
ACTR6-213ENST00000553038 EIF2S2P20042 333 aaKnown RBP17.83■□□□□ 0.45
ACTR6-213ENST00000553038 EIF4A1P60842 406 aaKnown RBP17.83■□□□□ 0.45
ACTR6-213ENST00000553038 AAMPQ13685 434 aa17.83■□□□□ 0.45
ACTR6-213ENST00000553038 C8orf37Q96NL8 207 aa17.83■□□□□ 0.45
ACTR6-213ENST00000553038 HDGFL1Q5TGJ6 251 aa17.82■□□□□ 0.44
ACTR6-213ENST00000553038 ARHGAP45Q92619 1136 aa17.82■□□□□ 0.44
ACTR6-213ENST00000553038 DDX19BQ9UMR2 479 aa17.82■□□□□ 0.44
ACTR6-213ENST00000553038 NGLY1Q96IV0 654 aa17.82■□□□□ 0.44
ACTR6-213ENST00000553038 SOS1Q07889 1333 aaPredicted RBP17.81■□□□□ 0.44
ACTR6-213ENST00000553038 TTC5Q8N0Z6 440 aa17.81■□□□□ 0.44
ACTR6-213ENST00000553038 SLC39A6Q13433 755 aa17.81■□□□□ 0.44
ACTR6-213ENST00000553038 KDM3BQ7LBC6 1761 aa17.8■□□□□ 0.44
ACTR6-213ENST00000553038 SCN11AQ9UI33 1791 aa17.8■□□□□ 0.44
ACTR6-213ENST00000553038 MEX3CQ5U5Q3 659 aaKnown RBP17.8■□□□□ 0.44
ACTR6-213ENST00000553038 CHMP4AQ9BY43 222 aa17.79■□□□□ 0.44
ACTR6-213ENST00000553038 ZBTB40Q9NUA8 1239 aa17.79■□□□□ 0.44
ACTR6-213ENST00000553038 ABCC4O15439 1325 aa17.78■□□□□ 0.44
ACTR6-213ENST00000553038 PTPRCP08575 1304 aa17.78■□□□□ 0.44
ACTR6-213ENST00000553038 EXOC5O00471 708 aa17.78■□□□□ 0.44
ACTR6-213ENST00000553038 HSPA1LP34931 641 aa17.78■□□□□ 0.44
ACTR6-213ENST00000553038 ZNF790Q6PG37 636 aa17.78■□□□□ 0.44
ACTR6-213ENST00000553038 ADAMTS7Q9UKP4 1686 aa17.78■□□□□ 0.44
ACTR6-213ENST00000553038 RGS3P49796 1198 aa17.77■□□□□ 0.44
ACTR6-213ENST00000553038 HOXB7P09629 217 aa17.77■□□□□ 0.43
ACTR6-213ENST00000553038 SPATA31A6Q5VVP1 1343 aa17.76■□□□□ 0.43
ACTR6-213ENST00000553038 ZBTB7BO15156 539 aaPredicted RBP17.76■□□□□ 0.43
ACTR6-213ENST00000553038 FKBP5Q13451 457 aaPredicted RBP17.76■□□□□ 0.43
ACTR6-213ENST00000553038 G2E3Q7L622 706 aa17.76■□□□□ 0.43
ACTR6-213ENST00000553038 SIPA1L3O60292 1781 aaPredicted RBP17.76■□□□□ 0.43
ACTR6-213ENST00000553038 SPATA31A1Q5TZJ5 1347 aa17.76■□□□□ 0.43
ACTR6-213ENST00000553038 PDE4AP27815 886 aa17.76■□□□□ 0.43
ACTR6-213ENST00000553038 SLC4A10Q6U841 1118 aa17.76■□□□□ 0.43
ACTR6-213ENST00000553038 CHMP4BQ9H444 224 aaKnown RBP17.76■□□□□ 0.43
ACTR6-213ENST00000553038 RWDD1Q9H446 243 aaPredicted RBP17.76■□□□□ 0.43
ACTR6-213ENST00000553038 RGS12O14924 1447 aa17.75■□□□□ 0.43
ACTR6-213ENST00000553038 NRAPQ86VF7 1730 aa17.75■□□□□ 0.43
ACTR6-213ENST00000553038 ERVV-2B6SEH9 535 aa17.75■□□□□ 0.43
ACTR6-213ENST00000553038 THRAP3Q9Y2W1 955 aaKnown RBP17.75■□□□□ 0.43
ACTR6-213ENST00000553038 A0A0G2JS52 829 aa17.74■□□□□ 0.43
ACTR6-213ENST00000553038 GIGYF1O75420 1035 aaPredicted RBP17.74■□□□□ 0.43
ACTR6-213ENST00000553038 FLIIQ13045 1269 aa17.74■□□□□ 0.43
ACTR6-213ENST00000553038 UNC5CLQ8IV45 518 aa17.74■□□□□ 0.43
ACTR6-213ENST00000553038 CDCA7Q9BWT1 371 aaPredicted RBP17.74■□□□□ 0.43
ACTR6-213ENST00000553038 CHPF2Q9P2E5 772 aa17.74■□□□□ 0.43
ACTR6-213ENST00000553038 MRC1P22897 1456 aa17.74■□□□□ 0.43
ACTR6-213ENST00000553038 NKX1-1Q15270 411 aaPredicted RBP17.74■□□□□ 0.43
ACTR6-213ENST00000553038 NWD2Q9ULI1 1742 aa17.73■□□□□ 0.43
ACTR6-213ENST00000553038 FMNL2Q96PY5 1086 aa17.73■□□□□ 0.43
ACTR6-213ENST00000553038 C1orf115Q9H7X2 142 aa17.73■□□□□ 0.43
ACTR6-213ENST00000553038 TMOD3Q9NYL9 352 aa17.73■□□□□ 0.43
ACTR6-213ENST00000553038 SLIT2O94813 1529 aa17.73■□□□□ 0.43
ACTR6-213ENST00000553038 DISP2A7MBM2 1401 aa17.73■□□□□ 0.43
ACTR6-213ENST00000553038 SPATA31A5Q5VU36 1347 aa17.73■□□□□ 0.43
ACTR6-213ENST00000553038 SPATA31A7Q8IWB4 1347 aa17.73■□□□□ 0.43
ACTR6-213ENST00000553038 PRAMEF22A3QJZ6 481 aa17.72■□□□□ 0.43
ACTR6-213ENST00000553038 DDB1Q16531 1140 aa17.72■□□□□ 0.43
ACTR6-213ENST00000553038 PDZRN3Q9UPQ7 1066 aa17.72■□□□□ 0.43
ACTR6-213ENST00000553038 SHANK3Q9BYB0 1731 aa17.72■□□□□ 0.43
ACTR6-213ENST00000553038 F6X3S4 739 aa17.72■□□□□ 0.43
ACTR6-213ENST00000553038 ZNF496Q96IT1 587 aaPredicted RBP17.72■□□□□ 0.43
ACTR6-213ENST00000553038 BACH2Q9BYV9 841 aa17.72■□□□□ 0.43
ACTR6-213ENST00000553038 HDAC1Q13547 482 aaPredicted RBP17.71■□□□□ 0.43
ACTR6-213ENST00000553038 SYTL4Q96C24 671 aaPredicted RBP17.71■□□□□ 0.43
ACTR6-213ENST00000553038 DBF4Q9UBU7 674 aaPredicted RBP17.71■□□□□ 0.43
ACTR6-213ENST00000553038 USP21Q9UK80 565 aa17.71■□□□□ 0.43
ACTR6-213ENST00000553038 ANXA1P04083 346 aa17.71■□□□□ 0.42
ACTR6-213ENST00000553038 PHAXQ9H814 394 aaKnown RBP17.71■□□□□ 0.42
ACTR6-213ENST00000553038 SNRPA1P09661 255 aaKnown RBP17.7■□□□□ 0.42
ACTR6-213ENST00000553038 INTS3Q68E01 1043 aaKnown RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms