RNA–Protein interactions for RNA: ENST00000552872.5

MMP19-209, Transcript of matrix metallopeptidase 19, humanhuman

TSL 1 (best)

Gene MMP19, Length 2,350 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP19-209ENST00000552872 NCBP3Q53F19 620 aaKnown RBP13.11□□□□□ -0.31
MMP19-209ENST00000552872 IFNL2Q8IZJ0 200 aa13.11□□□□□ -0.31
MMP19-209ENST00000552872 NFATC2IPQ8NCF5 419 aa13.11□□□□□ -0.31
MMP19-209ENST00000552872 BCL2L13Q9BXK5 485 aa13.11□□□□□ -0.31
MMP19-209ENST00000552872 GOLGB1Q14789 3259 aaKnown RBP13.11□□□□□ -0.31
MMP19-209ENST00000552872 DISP2A7MBM2 1401 aa13.11□□□□□ -0.31
MMP19-209ENST00000552872 RNMTO43148 476 aaKnown RBP13.1□□□□□ -0.31
MMP19-209ENST00000552872 CCDC27Q2M243 656 aa13.1□□□□□ -0.31
MMP19-209ENST00000552872 ZMYND15Q9H091 742 aa13.1□□□□□ -0.31
MMP19-209ENST00000552872 EXOSC9Q06265 439 aaKnown RBP13.1□□□□□ -0.31
MMP19-209ENST00000552872 PTF1AQ7RTS3 328 aa13.1□□□□□ -0.31
MMP19-209ENST00000552872 TSPYL6Q8N831 410 aa13.1□□□□□ -0.31
MMP19-209ENST00000552872 MARCH10Q8NA82 808 aaPredicted RBP13.1□□□□□ -0.31
MMP19-209ENST00000552872 NECTIN2Q92692 538 aa13.1□□□□□ -0.31
MMP19-209ENST00000552872 TRPC5Q9UL62 973 aaPredicted RBP13.1□□□□□ -0.31
MMP19-209ENST00000552872 PCDH11XQ9BZA7 1347 aa13.1□□□□□ -0.31
MMP19-209ENST00000552872 PCDH11YQ9BZA8 1340 aa13.1□□□□□ -0.31
MMP19-209ENST00000552872 FGD1P98174 961 aa13.09□□□□□ -0.31
MMP19-209ENST00000552872 LRRC37A3O60309 1634 aa13.09□□□□□ -0.31
MMP19-209ENST00000552872 POTEAQ6S8J7 498 aa13.09□□□□□ -0.31
MMP19-209ENST00000552872 WDR63Q8IWG1 891 aa13.09□□□□□ -0.31
MMP19-209ENST00000552872 E9PSI1 815 aa13.08□□□□□ -0.32
MMP19-209ENST00000552872 LMOD3Q0VAK6 560 aa13.08□□□□□ -0.32
MMP19-209ENST00000552872 TEFQ10587 303 aa13.08□□□□□ -0.32
MMP19-209ENST00000552872 SEPT12Q8IYM1 358 aa13.08□□□□□ -0.32
MMP19-209ENST00000552872 TSPYL4Q9UJ04 414 aa13.08□□□□□ -0.32
MMP19-209ENST00000552872 BRPF3Q9ULD4 1205 aa13.08□□□□□ -0.32
MMP19-209ENST00000552872 ATRNO75882 1429 aa13.08□□□□□ -0.32
MMP19-209ENST00000552872 C8orf58Q8NAV2 365 aa13.08□□□□□ -0.32
MMP19-209ENST00000552872 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.07□□□□□ -0.32
MMP19-209ENST00000552872 TOGARAM1Q9Y4F4 1720 aa13.07□□□□□ -0.32
MMP19-209ENST00000552872 SCN11AQ9UI33 1791 aa13.07□□□□□ -0.32
MMP19-209ENST00000552872 PRAMEF22A3QJZ6 481 aa13.07□□□□□ -0.32
MMP19-209ENST00000552872 KCNQ2O43526 872 aa13.07□□□□□ -0.32
MMP19-209ENST00000552872 PLIN1O60240 522 aa13.07□□□□□ -0.32
MMP19-209ENST00000552872 RNF123Q5XPI4 1314 aa13.06□□□□□ -0.32
MMP19-209ENST00000552872 BTBD11A6QL63 1104 aa13.06□□□□□ -0.32
MMP19-209ENST00000552872 BARGINQ6ZT62 677 aa13.06□□□□□ -0.32
MMP19-209ENST00000552872 CFAP44Q96MT7 982 aa13.06□□□□□ -0.32
MMP19-209ENST00000552872 THRAP3Q9Y2W1 955 aaKnown RBP13.06□□□□□ -0.32
MMP19-209ENST00000552872 BCAR3O75815 825 aa13.06□□□□□ -0.32
MMP19-209ENST00000552872 PRIM1P49642 420 aaKnown RBP13.06□□□□□ -0.32
MMP19-209ENST00000552872 CABP4P57796 275 aa13.06□□□□□ -0.32
MMP19-209ENST00000552872 PDE3BQ13370 1112 aa13.06□□□□□ -0.32
MMP19-209ENST00000552872 TRMT2AQ8IZ69 625 aaKnown RBP13.06□□□□□ -0.32
MMP19-209ENST00000552872 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.06□□□□□ -0.32
MMP19-209ENST00000552872 BRWD3Q6RI45 1802 aa13.06□□□□□ -0.32
MMP19-209ENST00000552872 CEMIPQ8WUJ3 1361 aa13.05□□□□□ -0.32
MMP19-209ENST00000552872 ZNF853P0CG23 659 aa13.05□□□□□ -0.32
MMP19-209ENST00000552872 TNS2Q63HR2 1409 aa13.05□□□□□ -0.32
MMP19-209ENST00000552872 DCAF5Q96JK2 942 aa13.05□□□□□ -0.32
MMP19-209ENST00000552872 IFT57Q9NWB7 429 aa13.05□□□□□ -0.32
MMP19-209ENST00000552872 GNAI1P63096 354 aa13.05□□□□□ -0.32
MMP19-209ENST00000552872 TAF7Q15545 349 aaPredicted RBP13.05□□□□□ -0.32
MMP19-209ENST00000552872 MYH16Q9H6N6 1097 aa13.05□□□□□ -0.32
MMP19-209ENST00000552872 SLC52A2Q9HAB3 445 aa13.05□□□□□ -0.32
MMP19-209ENST00000552872 CHL1O00533 1208 aa13.04□□□□□ -0.32
MMP19-209ENST00000552872 PTCD1O75127 700 aaKnown RBP13.04□□□□□ -0.32
MMP19-209ENST00000552872 DOT1LQ8TEK3 1739 aa13.04□□□□□ -0.32
MMP19-209ENST00000552872 PIP4K2AP48426 406 aaPredicted RBP13.03□□□□□ -0.32
MMP19-209ENST00000552872 KCNQ4P56696 695 aa13.03□□□□□ -0.32
MMP19-209ENST00000552872 ITGB4P16144 1822 aa13.03□□□□□ -0.32
MMP19-209ENST00000552872 ZNF772Q68DY9 489 aaPredicted RBP13.03□□□□□ -0.32
MMP19-209ENST00000552872 PIGBQ92521 554 aa13.03□□□□□ -0.32
MMP19-209ENST00000552872 ASAP1Q9ULH1 1129 aa13.03□□□□□ -0.32
MMP19-209ENST00000552872 HTATSF1O43719 755 aaKnown RBP13.02□□□□□ -0.32
MMP19-209ENST00000552872 RCAN3Q9UKA8 241 aa13.02□□□□□ -0.32
MMP19-209ENST00000552872 SIPA1L3O60292 1781 aaPredicted RBP13.02□□□□□ -0.33
MMP19-209ENST00000552872 NGEFQ8N5V2 710 aa13.02□□□□□ -0.33
MMP19-209ENST00000552872 THSD7AQ9UPZ6 1657 aa13.02□□□□□ -0.33
MMP19-209ENST00000552872 EIF2S2P20042 333 aaKnown RBP13.01□□□□□ -0.33
MMP19-209ENST00000552872 RXRBP28702 533 aa13.01□□□□□ -0.33
MMP19-209ENST00000552872 ARXQ96QS3 562 aa13.01□□□□□ -0.33
MMP19-209ENST00000552872 TMOD3Q9NYL9 352 aa13.01□□□□□ -0.33
MMP19-209ENST00000552872 ANXA1P04083 346 aa13.01□□□□□ -0.33
MMP19-209ENST00000552872 CALD1Q05682 793 aaKnown RBP13.01□□□□□ -0.33
MMP19-209ENST00000552872 AAMPQ13685 434 aa13.01□□□□□ -0.33
MMP19-209ENST00000552872 TWISTNBQ3B726 338 aaPredicted RBP13.01□□□□□ -0.33
MMP19-209ENST00000552872 TNNQ9UQP3 1299 aa13.01□□□□□ -0.33
MMP19-209ENST00000552872 IL16Q14005 1332 aa13.01□□□□□ -0.33
MMP19-209ENST00000552872 RBM6P78332 1123 aaKnown RBP13□□□□□ -0.33
MMP19-209ENST00000552872 NPM2Q86SE8 214 aaKnown RBP13□□□□□ -0.33
MMP19-209ENST00000552872 FRAT1Q92837 279 aaPredicted RBP13□□□□□ -0.33
MMP19-209ENST00000552872 ZNF496Q96IT1 587 aaPredicted RBP13□□□□□ -0.33
MMP19-209ENST00000552872 HSP90AB1P08238 724 aaKnown RBP13□□□□□ -0.33
MMP19-209ENST00000552872 NKX1-1Q15270 411 aaPredicted RBP13□□□□□ -0.33
MMP19-209ENST00000552872 ZNF790Q6PG37 636 aa13□□□□□ -0.33
MMP19-209ENST00000552872 CDCA7Q9BWT1 371 aaPredicted RBP13□□□□□ -0.33
MMP19-209ENST00000552872 ADAMTS7Q9UKP4 1686 aa12.99□□□□□ -0.33
MMP19-209ENST00000552872 ZNF428Q96B54 188 aa12.99□□□□□ -0.33
MMP19-209ENST00000552872 EIF4A1P60842 406 aaKnown RBP12.99□□□□□ -0.33
MMP19-209ENST00000552872 GSE1Q14687 1217 aa12.99□□□□□ -0.33
MMP19-209ENST00000552872 C20orf194Q5TEA3 1177 aa12.99□□□□□ -0.33
MMP19-209ENST00000552872 SSH1Q8WYL5 1049 aa12.99□□□□□ -0.33
MMP19-209ENST00000552872 RBM42Q9BTD8 480 aaKnown RBP12.99□□□□□ -0.33
MMP19-209ENST00000552872 KDM3BQ7LBC6 1761 aa12.98□□□□□ -0.33
MMP19-209ENST00000552872 VAMP4O75379 141 aa12.98□□□□□ -0.33
MMP19-209ENST00000552872 RGS12O14924 1447 aa12.98□□□□□ -0.33
MMP19-209ENST00000552872 ONECUT3O60422 494 aaPredicted RBP12.98□□□□□ -0.33
MMP19-209ENST00000552872 KRT27Q7Z3Y8 459 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms