RNA–Protein interactions for RNA: ENST00000552696.1

NPAS3-212, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 5

Gene NPAS3, Length 340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-212ENST00000552696 RHOQP17081 205 aa6.14□□□□□ -1.43
NPAS3-212ENST00000552696 CCDC102BQ68D86 513 aa6.14□□□□□ -1.43
NPAS3-212ENST00000552696 SIX5Q8N196 739 aa6.14□□□□□ -1.43
NPAS3-212ENST00000552696 LARGE2Q8N3Y3 721 aa6.14□□□□□ -1.43
NPAS3-212ENST00000552696 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.14□□□□□ -1.43
NPAS3-212ENST00000552696 GRIP2Q9C0E4 1043 aa6.14□□□□□ -1.43
NPAS3-212ENST00000552696 VRTNQ9H8Y1 702 aa6.14□□□□□ -1.43
NPAS3-212ENST00000552696 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.13□□□□□ -1.43
NPAS3-212ENST00000552696 FAM196BA6NMK8 535 aa6.13□□□□□ -1.43
NPAS3-212ENST00000552696 USP17L15C9J2P7 530 aa6.13□□□□□ -1.43
NPAS3-212ENST00000552696 USP17L10C9JJH3 530 aa6.13□□□□□ -1.43
NPAS3-212ENST00000552696 USP17L13C9JLJ4 530 aa6.13□□□□□ -1.43
NPAS3-212ENST00000552696 USP17L12C9JPN9 530 aa6.13□□□□□ -1.43
NPAS3-212ENST00000552696 USP17L11C9JVI0 530 aa6.13□□□□□ -1.43
NPAS3-212ENST00000552696 USP17L21D6R901 530 aa6.13□□□□□ -1.43
NPAS3-212ENST00000552696 USP17L18D6R9N7 530 aa6.13□□□□□ -1.43
NPAS3-212ENST00000552696 USP17L22D6RA61 530 aa6.13□□□□□ -1.43
NPAS3-212ENST00000552696 USP17L17D6RBQ6 530 aa6.13□□□□□ -1.43
NPAS3-212ENST00000552696 USP17L19D6RCP7 530 aa6.13□□□□□ -1.43
NPAS3-212ENST00000552696 USP17L20D6RJB6 530 aa6.13□□□□□ -1.43
NPAS3-212ENST00000552696 PTSQ03393 145 aa6.13□□□□□ -1.43
NPAS3-212ENST00000552696 USP17L24Q0WX57 530 aa6.13□□□□□ -1.43
NPAS3-212ENST00000552696 PTK7Q13308 1070 aa6.13□□□□□ -1.43
NPAS3-212ENST00000552696 CDCA8Q53HL2 280 aa6.13□□□□□ -1.43
NPAS3-212ENST00000552696 LARP1Q6PKG0 1096 aaKnown RBP6.13□□□□□ -1.43
NPAS3-212ENST00000552696 ZSCAN10Q96SZ4 725 aaPredicted RBP6.13□□□□□ -1.43
NPAS3-212ENST00000552696 SENP3-EIF4A1A0A087X0R7 540 aa6.12□□□□□ -1.43
NPAS3-212ENST00000552696 SFI1A8K8P3 1242 aa6.12□□□□□ -1.43
NPAS3-212ENST00000552696 DKK1O94907 266 aa6.12□□□□□ -1.43
NPAS3-212ENST00000552696 SMTNP53814 917 aa6.12□□□□□ -1.43
NPAS3-212ENST00000552696 POU4F2Q12837 409 aa6.12□□□□□ -1.43
NPAS3-212ENST00000552696 SLC4A9Q96Q91 983 aa6.12□□□□□ -1.43
NPAS3-212ENST00000552696 A6NJY4 79 aa6.11□□□□□ -1.43
NPAS3-212ENST00000552696 SPATA31C2B4DYI2 1134 aa6.11□□□□□ -1.43
NPAS3-212ENST00000552696 BACH1O14867 736 aa6.11□□□□□ -1.43
NPAS3-212ENST00000552696 VEGFBP49765 207 aa6.11□□□□□ -1.43
NPAS3-212ENST00000552696 DPYDQ12882 1025 aa6.11□□□□□ -1.43
NPAS3-212ENST00000552696 GNASQ5JWF2 1037 aa6.11□□□□□ -1.43
NPAS3-212ENST00000552696 TMEM214Q6NUQ4 689 aaKnown RBP6.11□□□□□ -1.43
NPAS3-212ENST00000552696 NBPF10Q6P3W6 841 aaKnown RBP6.11□□□□□ -1.43
NPAS3-212ENST00000552696 TAS1R3Q7RTX0 852 aa6.11□□□□□ -1.43
NPAS3-212ENST00000552696 NBPF15Q8N660 670 aa6.11□□□□□ -1.43
NPAS3-212ENST00000552696 ZNF775Q96BV0 537 aaPredicted RBP6.11□□□□□ -1.43
NPAS3-212ENST00000552696 NXF1Q9UBU9 619 aaKnown RBP6.11□□□□□ -1.43
NPAS3-212ENST00000552696 RBM19Q9Y4C8 960 aaKnown RBP6.11□□□□□ -1.43
NPAS3-212ENST00000552696 USP3Q9Y6I4 520 aa6.11□□□□□ -1.43
NPAS3-212ENST00000552696 SLC35F4A4IF30 521 aa6.1□□□□□ -1.43
NPAS3-212ENST00000552696 GTF2E1P29083 439 aaPredicted RBP6.1□□□□□ -1.43
NPAS3-212ENST00000552696 PHKA2P46019 1235 aa6.1□□□□□ -1.43
NPAS3-212ENST00000552696 EPHA4P54764 986 aa6.1□□□□□ -1.43
NPAS3-212ENST00000552696 MTFR1Q15390 333 aa6.1□□□□□ -1.43
NPAS3-212ENST00000552696 PPARGC1BQ86YN6 1023 aaKnown RBP6.1□□□□□ -1.43
NPAS3-212ENST00000552696 ANKMY2Q8IV38 441 aa6.1□□□□□ -1.43
NPAS3-212ENST00000552696 CCDC155Q8N6L0 562 aa6.1□□□□□ -1.43
NPAS3-212ENST00000552696 TSEN2Q8NCE0 465 aaKnown RBP6.1□□□□□ -1.43
NPAS3-212ENST00000552696 RHBDD1Q8TEB9 315 aa6.1□□□□□ -1.43
NPAS3-212ENST00000552696 PBXIP1Q96AQ6 731 aa6.1□□□□□ -1.43
NPAS3-212ENST00000552696 TERTO14746 1132 aaKnown RBP6.09□□□□□ -1.43
NPAS3-212ENST00000552696 PPFIA3O75145 1194 aa6.09□□□□□ -1.43
NPAS3-212ENST00000552696 SEC13P55735 322 aa6.09□□□□□ -1.43
NPAS3-212ENST00000552696 SRPK2P78362 688 aaKnown RBP6.09□□□□□ -1.43
NPAS3-212ENST00000552696 C4orf17Q53FE4 359 aa6.09□□□□□ -1.43
NPAS3-212ENST00000552696 TNS4Q8IZW8 715 aa6.09□□□□□ -1.43
NPAS3-212ENST00000552696 ARXQ96QS3 562 aa6.09□□□□□ -1.43
NPAS3-212ENST00000552696 ARID3AQ99856 593 aa6.09□□□□□ -1.43
NPAS3-212ENST00000552696 SCHIP1Q9P0W5 487 aaPredicted RBP6.09□□□□□ -1.43
NPAS3-212ENST00000552696 NOVA2Q9UNW9 492 aaKnown RBP6.09□□□□□ -1.43
NPAS3-212ENST00000552696 IQSEC3Q9UPP2 1182 aaPredicted RBP6.09□□□□□ -1.43
NPAS3-212ENST00000552696 H3BM21 787 aa6.08□□□□□ -1.44
NPAS3-212ENST00000552696 M0R2N6 131 aa6.08□□□□□ -1.44
NPAS3-212ENST00000552696 PLA2G4AP47712 749 aa6.08□□□□□ -1.44
NPAS3-212ENST00000552696 TBCELQ5QJ74 424 aa6.08□□□□□ -1.44
NPAS3-212ENST00000552696 SLC9A9Q8IVB4 645 aa6.08□□□□□ -1.44
NPAS3-212ENST00000552696 ZNF295-AS1Q8N0V1 137 aa6.08□□□□□ -1.44
NPAS3-212ENST00000552696 TIMMDC1Q9NPL8 285 aa6.08□□□□□ -1.44
NPAS3-212ENST00000552696 ZMIZ1Q9ULJ6 1067 aa6.08□□□□□ -1.44
NPAS3-212ENST00000552696 CDK2AP1O14519 115 aa6.07□□□□□ -1.44
NPAS3-212ENST00000552696 LGR5O75473 907 aa6.07□□□□□ -1.44
NPAS3-212ENST00000552696 FOXK2Q01167 660 aa6.07□□□□□ -1.44
NPAS3-212ENST00000552696 NFX1Q12986 1120 aaKnown RBP6.07□□□□□ -1.44
NPAS3-212ENST00000552696 WDR44Q5JSH3 913 aa6.07□□□□□ -1.44
NPAS3-212ENST00000552696 NPAS3Q8IXF0 933 aa6.07□□□□□ -1.44
NPAS3-212ENST00000552696 STK32AQ8WU08 396 aa6.07□□□□□ -1.44
NPAS3-212ENST00000552696 NIFKQ9BYG3 293 aaKnown RBP6.07□□□□□ -1.44
NPAS3-212ENST00000552696 TSPAN10Q9H1Z9 355 aaPredicted RBP6.07□□□□□ -1.44
NPAS3-212ENST00000552696 DYRK1BQ9Y463 629 aa6.07□□□□□ -1.44
NPAS3-212ENST00000552696 ATG7O95352 703 aa6.06□□□□□ -1.44
NPAS3-212ENST00000552696 ITGA6P23229 1130 aa6.06□□□□□ -1.44
NPAS3-212ENST00000552696 FAM200AQ8TCP9 573 aa6.06□□□□□ -1.44
NPAS3-212ENST00000552696 ZDHHC1Q8WTX9 485 aa6.06□□□□□ -1.44
NPAS3-212ENST00000552696 GAS2L1Q99501 681 aaPredicted RBP6.06□□□□□ -1.44
NPAS3-212ENST00000552696 CUEDC1Q9NWM3 386 aaPredicted RBP6.06□□□□□ -1.44
NPAS3-212ENST00000552696 CABP1Q9NZU7 370 aa6.06□□□□□ -1.44
NPAS3-212ENST00000552696 ERBB4Q15303 1308 aa6.05□□□□□ -1.44
NPAS3-212ENST00000552696 A0A1B0GTH6 734 aa6.05□□□□□ -1.44
NPAS3-212ENST00000552696 CDC14CA4D256 554 aa6.05□□□□□ -1.44
NPAS3-212ENST00000552696 WFS1O76024 890 aa6.05□□□□□ -1.44
NPAS3-212ENST00000552696 ELOAQ14241 798 aaKnown RBP6.05□□□□□ -1.44
NPAS3-212ENST00000552696 LCE2CQ5TA81 110 aa6.05□□□□□ -1.44
NPAS3-212ENST00000552696 RIPOR1Q6ZS17 1223 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms