RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-223ENST00000552480 COG6Q9Y2V7 657 aa16.23■□□□□ 0.19
CACNB3-223ENST00000552480 SHANK3Q9BYB0 1731 aa16.22■□□□□ 0.19
CACNB3-223ENST00000552480 PCDH11XQ9BZA7 1347 aa16.21■□□□□ 0.19
CACNB3-223ENST00000552480 PCDH11YQ9BZA8 1340 aa16.21■□□□□ 0.19
CACNB3-223ENST00000552480 BTBD11A6QL63 1104 aa16.21■□□□□ 0.19
CACNB3-223ENST00000552480 CYP27B1O15528 508 aa16.21■□□□□ 0.19
CACNB3-223ENST00000552480 MVPQ14764 893 aaKnown RBP16.21■□□□□ 0.19
CACNB3-223ENST00000552480 CLUAP1Q96AJ1 413 aa16.21■□□□□ 0.19
CACNB3-223ENST00000552480 DCAF5Q96JK2 942 aa16.21■□□□□ 0.19
CACNB3-223ENST00000552480 NWD2Q9ULI1 1742 aa16.2■□□□□ 0.18
CACNB3-223ENST00000552480 WNK3Q9BYP7 1800 aa16.2■□□□□ 0.18
CACNB3-223ENST00000552480 ZCRB1Q8TBF4 217 aaKnown RBP16.2■□□□□ 0.18
CACNB3-223ENST00000552480 JCADQ9P266 1359 aa16.2■□□□□ 0.18
CACNB3-223ENST00000552480 DISP2A7MBM2 1401 aa16.19■□□□□ 0.18
CACNB3-223ENST00000552480 TCERG1O14776 1098 aaKnown RBP16.19■□□□□ 0.18
CACNB3-223ENST00000552480 HOXB7P09629 217 aa16.19■□□□□ 0.18
CACNB3-223ENST00000552480 EIF4A1P60842 406 aaKnown RBP16.19■□□□□ 0.18
CACNB3-223ENST00000552480 API5Q9BZZ5 524 aaKnown RBP16.19■□□□□ 0.18
CACNB3-223ENST00000552480 SLC52A2Q9HAB3 445 aa16.18■□□□□ 0.18
CACNB3-223ENST00000552480 ABCC4O15439 1325 aa16.18■□□□□ 0.18
CACNB3-223ENST00000552480 ADAMTS2O95450 1211 aa16.17■□□□□ 0.18
CACNB3-223ENST00000552480 CCDC30Q5VVM6 783 aa16.17■□□□□ 0.18
CACNB3-223ENST00000552480 TMEM57Q8N5G2 664 aa16.17■□□□□ 0.18
CACNB3-223ENST00000552480 CHMP4AQ9BY43 222 aa16.17■□□□□ 0.18
CACNB3-223ENST00000552480 DDX19BQ9UMR2 479 aa16.17■□□□□ 0.18
CACNB3-223ENST00000552480 SLIT2O94813 1529 aa16.17■□□□□ 0.18
CACNB3-223ENST00000552480 PTPRCP08575 1304 aa16.17■□□□□ 0.18
CACNB3-223ENST00000552480 NUTM2BA6NNL0 878 aaPredicted RBP16.16■□□□□ 0.18
CACNB3-223ENST00000552480 NUTM2EB1AL46 878 aaPredicted RBP16.16■□□□□ 0.18
CACNB3-223ENST00000552480 NKX1-1Q15270 411 aaPredicted RBP16.16■□□□□ 0.18
CACNB3-223ENST00000552480 NUTM2AQ8IVF1 878 aaPredicted RBP16.16■□□□□ 0.18
CACNB3-223ENST00000552480 ITPRIPQ8IWB1 547 aa16.16■□□□□ 0.18
CACNB3-223ENST00000552480 STK31Q9BXU1 1019 aa16.16■□□□□ 0.18
CACNB3-223ENST00000552480 HEG1Q9ULI3 1381 aa16.15■□□□□ 0.18
CACNB3-223ENST00000552480 RGS12O14924 1447 aa16.15■□□□□ 0.18
CACNB3-223ENST00000552480 KCNQ3O43525 872 aa16.15■□□□□ 0.18
CACNB3-223ENST00000552480 KDM2BQ8NHM5 1336 aa16.15■□□□□ 0.18
CACNB3-223ENST00000552480 SLC4A2P04920 1241 aa16.14■□□□□ 0.17
CACNB3-223ENST00000552480 CENPQQ7L2Z9 268 aaPredicted RBP16.14■□□□□ 0.17
CACNB3-223ENST00000552480 USP35Q9P2H5 1018 aa16.14■□□□□ 0.17
CACNB3-223ENST00000552480 HDGFL1Q5TGJ6 251 aa16.13■□□□□ 0.17
CACNB3-223ENST00000552480 CHMP4BQ9H444 224 aaKnown RBP16.13■□□□□ 0.17
CACNB3-223ENST00000552480 SPATA31A6Q5VVP1 1343 aa16.13■□□□□ 0.17
CACNB3-223ENST00000552480 CACNA1FO60840 1977 aa16.13■□□□□ 0.17
CACNB3-223ENST00000552480 PAPPAQ13219 1627 aa16.12■□□□□ 0.17
CACNB3-223ENST00000552480 ERVV-2B6SEH9 535 aa16.12■□□□□ 0.17
CACNB3-223ENST00000552480 CABP4P57796 275 aa16.12■□□□□ 0.17
CACNB3-223ENST00000552480 ZNF790Q6PG37 636 aa16.12■□□□□ 0.17
CACNB3-223ENST00000552480 NFATC2IPQ8NCF5 419 aa16.12■□□□□ 0.17
CACNB3-223ENST00000552480 CDCA7Q9BWT1 371 aaPredicted RBP16.12■□□□□ 0.17
CACNB3-223ENST00000552480 THRAP3Q9Y2W1 955 aaKnown RBP16.12■□□□□ 0.17
CACNB3-223ENST00000552480 SPATA31A1Q5TZJ5 1347 aa16.12■□□□□ 0.17
CACNB3-223ENST00000552480 TOGARAM1Q9Y4F4 1720 aa16.11■□□□□ 0.17
CACNB3-223ENST00000552480 LRP6O75581 1613 aa16.11■□□□□ 0.17
CACNB3-223ENST00000552480 TNS2Q63HR2 1409 aa16.11■□□□□ 0.17
CACNB3-223ENST00000552480 GIGYF1O75420 1035 aaPredicted RBP16.1■□□□□ 0.17
CACNB3-223ENST00000552480 G2E3Q7L622 706 aa16.1■□□□□ 0.17
CACNB3-223ENST00000552480 DDX54Q8TDD1 881 aaKnown RBP16.1■□□□□ 0.17
CACNB3-223ENST00000552480 C5P01031 1676 aa16.1■□□□□ 0.17
CACNB3-223ENST00000552480 N4BP2Q86UW6 1770 aaPredicted RBP16.09■□□□□ 0.17
CACNB3-223ENST00000552480 FLIIQ13045 1269 aa16.09■□□□□ 0.17
CACNB3-223ENST00000552480 INTS3Q68E01 1043 aaKnown RBP16.09■□□□□ 0.17
CACNB3-223ENST00000552480 TTC5Q8N0Z6 440 aa16.09■□□□□ 0.17
CACNB3-223ENST00000552480 NECTIN2Q92692 538 aa16.09■□□□□ 0.17
CACNB3-223ENST00000552480 ZBTB40Q9NUA8 1239 aa16.09■□□□□ 0.17
CACNB3-223ENST00000552480 SPATA31A5Q5VU36 1347 aa16.09■□□□□ 0.17
CACNB3-223ENST00000552480 SPATA31A7Q8IWB4 1347 aa16.09■□□□□ 0.17
CACNB3-223ENST00000552480 GLI3P10071 1580 aa16.09■□□□□ 0.17
CACNB3-223ENST00000552480 UBR2Q8IWV8 1755 aa16.08■□□□□ 0.17
CACNB3-223ENST00000552480 EIF2S2P20042 333 aaKnown RBP16.08■□□□□ 0.16
CACNB3-223ENST00000552480 SLC39A6Q13433 755 aa16.08■□□□□ 0.16
CACNB3-223ENST00000552480 PCDHB15Q9Y5E8 787 aa16.08■□□□□ 0.16
CACNB3-223ENST00000552480 PXDNLA1KZ92 1463 aa16.08■□□□□ 0.16
CACNB3-223ENST00000552480 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.08■□□□□ 0.16
CACNB3-223ENST00000552480 ZBTB7BO15156 539 aaPredicted RBP16.07■□□□□ 0.16
CACNB3-223ENST00000552480 UNC5CLQ8IV45 518 aa16.07■□□□□ 0.16
CACNB3-223ENST00000552480 LAMB4A4D0S4 1761 aa16.07■□□□□ 0.16
CACNB3-223ENST00000552480 EXOC5O00471 708 aa16.06■□□□□ 0.16
CACNB3-223ENST00000552480 IGHDP01880 384 aa16.06■□□□□ 0.16
CACNB3-223ENST00000552480 BARGINQ6ZT62 677 aa16.06■□□□□ 0.16
CACNB3-223ENST00000552480 FMNL2Q96PY5 1086 aa16.06■□□□□ 0.16
CACNB3-223ENST00000552480 RWDD1Q9H446 243 aaPredicted RBP16.06■□□□□ 0.16
CACNB3-223ENST00000552480 CHPF2Q9P2E5 772 aa16.06■□□□□ 0.16
CACNB3-223ENST00000552480 BCL9LQ86UU0 1499 aa16.05■□□□□ 0.16
CACNB3-223ENST00000552480 HSPA1LP34931 641 aa16.05■□□□□ 0.16
CACNB3-223ENST00000552480 CCT4P50991 539 aaKnown RBP16.05■□□□□ 0.16
CACNB3-223ENST00000552480 FKBP5Q13451 457 aaPredicted RBP16.05■□□□□ 0.16
CACNB3-223ENST00000552480 ZNF496Q96IT1 587 aaPredicted RBP16.05■□□□□ 0.16
CACNB3-223ENST00000552480 C8orf37Q96NL8 207 aa16.05■□□□□ 0.16
CACNB3-223ENST00000552480 DBF4Q9UBU7 674 aaPredicted RBP16.05■□□□□ 0.16
CACNB3-223ENST00000552480 KCPQ6ZWJ8 1503 aa16.04■□□□□ 0.16
CACNB3-223ENST00000552480 SNRPA1P09661 255 aaKnown RBP16.04■□□□□ 0.16
CACNB3-223ENST00000552480 VPS72Q15906 364 aa16.04■□□□□ 0.16
CACNB3-223ENST00000552480 FNBP4Q8N3X1 1017 aaPredicted RBP16.04■□□□□ 0.16
CACNB3-223ENST00000552480 NGLY1Q96IV0 654 aa16.04■□□□□ 0.16
CACNB3-223ENST00000552480 PRAMEF22A3QJZ6 481 aa16.03■□□□□ 0.16
CACNB3-223ENST00000552480 HDAC1Q13547 482 aaPredicted RBP16.03■□□□□ 0.16
CACNB3-223ENST00000552480 PHAXQ9H814 394 aaKnown RBP16.03■□□□□ 0.16
CACNB3-223ENST00000552480 TMOD3Q9NYL9 352 aa16.03■□□□□ 0.16
CACNB3-223ENST00000552480 CCDC9Q9Y3X0 531 aaKnown RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms