RNA–Protein interactions for RNA: ENST00000552343.1

HCFC2-206, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 992 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-206ENST00000552343 FAM117AQ9C073 453 aa8.29□□□□□ -1.08
HCFC2-206ENST00000552343 RRAGCQ9HB90 399 aa8.29□□□□□ -1.08
HCFC2-206ENST00000552343 SCTRP47872 440 aa8.28□□□□□ -1.08
HCFC2-206ENST00000552343 C14orf37Q86TY3 774 aa8.28□□□□□ -1.08
HCFC2-206ENST00000552343 CCDC125Q86Z20 511 aa8.28□□□□□ -1.08
HCFC2-206ENST00000552343 EDARADDQ8WWZ3 215 aa8.28□□□□□ -1.08
HCFC2-206ENST00000552343 ARHGEF10LQ9HCE6 1279 aa8.28□□□□□ -1.08
HCFC2-206ENST00000552343 RFC5P40937 340 aa8.27□□□□□ -1.09
HCFC2-206ENST00000552343 GDF2Q9UK05 429 aaPredicted RBP8.27□□□□□ -1.09
HCFC2-206ENST00000552343 TRAK2O60296 914 aa8.26□□□□□ -1.09
HCFC2-206ENST00000552343 FBXO45P0C2W1 286 aa8.26□□□□□ -1.09
HCFC2-206ENST00000552343 GRIN2CQ14957 1233 aa8.26□□□□□ -1.09
HCFC2-206ENST00000552343 RNF20Q5VTR2 975 aa8.26□□□□□ -1.09
HCFC2-206ENST00000552343 OSBPL3Q9H4L5 887 aa8.26□□□□□ -1.09
HCFC2-206ENST00000552343 SUV39H2Q9H5I1 410 aa8.26□□□□□ -1.09
HCFC2-206ENST00000552343 GPAMQ9HCL2 828 aa8.26□□□□□ -1.09
HCFC2-206ENST00000552343 PHF24Q9UPV7 400 aa8.26□□□□□ -1.09
HCFC2-206ENST00000552343 HOXB4P17483 251 aaPredicted RBP8.25□□□□□ -1.09
HCFC2-206ENST00000552343 LINC00114Q6XXX2 140 aa8.25□□□□□ -1.09
HCFC2-206ENST00000552343 PHKA2P46019 1235 aa8.24□□□□□ -1.09
HCFC2-206ENST00000552343 UBAP2LQ14157 1087 aaKnown RBP8.24□□□□□ -1.09
HCFC2-206ENST00000552343 LCE3BQ5TA77 95 aa8.24□□□□□ -1.09
HCFC2-206ENST00000552343 GOPCQ9HD26 462 aa8.24□□□□□ -1.09
HCFC2-206ENST00000552343 RAB6BQ9NRW1 208 aa8.24□□□□□ -1.09
HCFC2-206ENST00000552343 PCDHB11Q9Y5F2 797 aa8.24□□□□□ -1.09
HCFC2-206ENST00000552343 C1QTNF9BB2RNN3 333 aa8.23□□□□□ -1.09
HCFC2-206ENST00000552343 GOLGA6L1Q8N7Z2 621 aa8.23□□□□□ -1.09
HCFC2-206ENST00000552343 A0A1B0GTH6 734 aa8.22□□□□□ -1.09
HCFC2-206ENST00000552343 C2CD2LO14523 706 aa8.22□□□□□ -1.09
HCFC2-206ENST00000552343 CENPCQ03188 943 aa8.22□□□□□ -1.09
HCFC2-206ENST00000552343 IL2RAP01589 272 aa8.21□□□□□ -1.1
HCFC2-206ENST00000552343 AMPD1P23109 780 aa8.21□□□□□ -1.1
HCFC2-206ENST00000552343 CNKSR1Q969H4 720 aa8.21□□□□□ -1.1
HCFC2-206ENST00000552343 ESYT1Q9BSJ8 1104 aa8.21□□□□□ -1.1
HCFC2-206ENST00000552343 RUBCNLQ9H714 662 aa8.21□□□□□ -1.1
HCFC2-206ENST00000552343 TIMELESSQ9UNS1 1208 aa8.21□□□□□ -1.1
HCFC2-206ENST00000552343 BMP4P12644 408 aa8.2□□□□□ -1.1
HCFC2-206ENST00000552343 SLCO4C1Q6ZQN7 724 aa8.2□□□□□ -1.1
HCFC2-206ENST00000552343 CD163Q86VB7 1156 aa8.2□□□□□ -1.1
HCFC2-206ENST00000552343 GJD4Q96KN9 370 aaPredicted RBP8.2□□□□□ -1.1
HCFC2-206ENST00000552343 PCMTD1Q96MG8 357 aaPredicted RBP8.2□□□□□ -1.1
HCFC2-206ENST00000552343 ZSCAN10Q96SZ4 725 aaPredicted RBP8.2□□□□□ -1.1
HCFC2-206ENST00000552343 ESF1Q9H501 851 aaKnown RBP8.2□□□□□ -1.1
HCFC2-206ENST00000552343 GGA1Q9UJY5 639 aa8.2□□□□□ -1.1
HCFC2-206ENST00000552343 ATXN7L1Q9ULK2 861 aaPredicted RBP8.2□□□□□ -1.1
HCFC2-206ENST00000552343 GNRH1P01148 92 aa8.19□□□□□ -1.1
HCFC2-206ENST00000552343 LBRQ14739 615 aaKnown RBP8.19□□□□□ -1.1
HCFC2-206ENST00000552343 GNB5O14775 395 aa8.18□□□□□ -1.1
HCFC2-206ENST00000552343 CSB-PGBD3P0DP91 1061 aa8.18□□□□□ -1.1
HCFC2-206ENST00000552343 ITGB7P26010 798 aa8.18□□□□□ -1.1
HCFC2-206ENST00000552343 MSX1P28360 303 aa8.18□□□□□ -1.1
HCFC2-206ENST00000552343 CHRNA4P43681 627 aa8.18□□□□□ -1.1
HCFC2-206ENST00000552343 MCCD1P59942 119 aaPredicted RBP8.18□□□□□ -1.1
HCFC2-206ENST00000552343 PGBD3Q8N328 593 aa8.18□□□□□ -1.1
HCFC2-206ENST00000552343 ABHD17AQ96GS6 310 aa8.18□□□□□ -1.1
HCFC2-206ENST00000552343 BTBD6Q96KE9 485 aa8.18□□□□□ -1.1
HCFC2-206ENST00000552343 HRH3Q9Y5N1 445 aa8.18□□□□□ -1.1
HCFC2-206ENST00000552343 PIK3R2O00459 728 aa8.17□□□□□ -1.1
HCFC2-206ENST00000552343 FGFR3P22607 806 aa8.17□□□□□ -1.1
HCFC2-206ENST00000552343 CTBSQ01459 385 aa8.17□□□□□ -1.1
HCFC2-206ENST00000552343 NR1H3Q13133 447 aa8.17□□□□□ -1.1
HCFC2-206ENST00000552343 TMEM259Q4ZIN3 620 aa8.17□□□□□ -1.1
HCFC2-206ENST00000552343 C4orf17Q53FE4 359 aa8.17□□□□□ -1.1
HCFC2-206ENST00000552343 EFHC2Q5JST6 749 aa8.17□□□□□ -1.1
HCFC2-206ENST00000552343 KRTAP4-12Q9BQ66 201 aa8.17□□□□□ -1.1
HCFC2-206ENST00000552343 BNIP3LO60238 219 aa8.16□□□□□ -1.1
HCFC2-206ENST00000552343 GNASQ5JWF2 1037 aa8.16□□□□□ -1.1
HCFC2-206ENST00000552343 TMEM214Q6NUQ4 689 aaKnown RBP8.16□□□□□ -1.1
HCFC2-206ENST00000552343 XAGE2Q96GT9 111 aa8.16□□□□□ -1.1
HCFC2-206ENST00000552343 FHDC1Q9C0D6 1143 aaPredicted RBP8.16□□□□□ -1.1
HCFC2-206ENST00000552343 NDFIP2Q9NV92 336 aa8.16□□□□□ -1.1
HCFC2-206ENST00000552343 EPXP11678 715 aa8.15□□□□□ -1.1
HCFC2-206ENST00000552343 DGKGP49619 791 aa8.15□□□□□ -1.1
HCFC2-206ENST00000552343 GTF2E1P29083 439 aaPredicted RBP8.14□□□□□ -1.11
HCFC2-206ENST00000552343 FLIIQ13045 1269 aa8.14□□□□□ -1.11
HCFC2-206ENST00000552343 DOC2BQ14184 412 aa8.14□□□□□ -1.11
HCFC2-206ENST00000552343 ZNF592Q92610 1267 aa8.14□□□□□ -1.11
HCFC2-206ENST00000552343 CDCA7Q9BWT1 371 aaPredicted RBP8.14□□□□□ -1.11
HCFC2-206ENST00000552343 SEMA6BQ9H3T3 888 aa8.14□□□□□ -1.11
HCFC2-206ENST00000552343 NEURL1BA8MQ27 555 aa8.13□□□□□ -1.11
HCFC2-206ENST00000552343 ARAFP10398 606 aa8.13□□□□□ -1.11
HCFC2-206ENST00000552343 RNF135Q8IUD6 432 aa8.13□□□□□ -1.11
HCFC2-206ENST00000552343 NOP53Q9NZM5 478 aaKnown RBP8.13□□□□□ -1.11
HCFC2-206ENST00000552343 MYCP01106 439 aaPredicted RBP8.12□□□□□ -1.11
HCFC2-206ENST00000552343 KRTAP9-9Q9BYP9 154 aa8.12□□□□□ -1.11
HCFC2-206ENST00000552343 KRTAP9-4Q9BYQ2 154 aa8.12□□□□□ -1.11
HCFC2-206ENST00000552343 ZNF330Q9Y3S2 320 aaPredicted RBP8.12□□□□□ -1.11
HCFC2-206ENST00000552343 CCDC85AQ96PX6 553 aaPredicted RBP8.11□□□□□ -1.11
HCFC2-206ENST00000552343 CRISPLD1Q9H336 500 aa8.11□□□□□ -1.11
HCFC2-206ENST00000552343 ZMYM1Q5SVZ6 1142 aa8.1□□□□□ -1.11
HCFC2-206ENST00000552343 CHSY3Q70JA7 882 aa8.1□□□□□ -1.11
HCFC2-206ENST00000552343 RHBDD1Q8TEB9 315 aa8.1□□□□□ -1.11
HCFC2-206ENST00000552343 DNAAF2Q9NVR5 837 aaKnown RBP8.1□□□□□ -1.11
HCFC2-206ENST00000552343 GPR37L1O60883 481 aa8.09□□□□□ -1.11
HCFC2-206ENST00000552343 STAU1O95793 577 aaKnown RBP8.09□□□□□ -1.11
HCFC2-206ENST00000552343 PPARGC1BQ86YN6 1023 aaKnown RBP8.09□□□□□ -1.11
HCFC2-206ENST00000552343 ZCCHC2Q9C0B9 1178 aaKnown RBP8.09□□□□□ -1.11
HCFC2-206ENST00000552343 ESCO1Q5FWF5 840 aa8.08□□□□□ -1.12
HCFC2-206ENST00000552343 FIGNL1Q6PIW4 674 aa8.08□□□□□ -1.12
HCFC2-206ENST00000552343 CEP126Q9P2H0 1117 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms