RNA–Protein interactions for RNA: ENST00000552211.5

NCKAP1L-208, Transcript of NCK associated protein 1 like, human

TSL 5

Gene NCKAP1L, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCKAP1L-208	ENST00000552211	SBF1	O95248	1867 aa		14.16	□□□□□ -0.14
NCKAP1L-208	ENST00000552211	KDM6A	O15550	1401 aa	Predicted RBP	14.15	□□□□□ -0.14
NCKAP1L-208	ENST00000552211	ARFGEF1	Q9Y6D6	1849 aa		14.15	□□□□□ -0.14
NCKAP1L-208	ENST00000552211	MMP10	P09238	476 aa		14.15	□□□□□ -0.14
NCKAP1L-208	ENST00000552211	PHKG2	P15735	406 aa		14.15	□□□□□ -0.14
NCKAP1L-208	ENST00000552211	HSPA6	P17066	643 aa		14.15	□□□□□ -0.14
NCKAP1L-208	ENST00000552211	POLK	Q9UBT6	870 aa		14.15	□□□□□ -0.14
NCKAP1L-208	ENST00000552211		A0A0G2JLW4	131 aa		14.14	□□□□□ -0.15
NCKAP1L-208	ENST00000552211	ATP6V1A	P38606	617 aa		14.14	□□□□□ -0.15
NCKAP1L-208	ENST00000552211	EIF4A2	Q14240	407 aa	Known RBP	14.14	□□□□□ -0.15
NCKAP1L-208	ENST00000552211	WASHC2A	Q641Q2	1341 aa		14.14	□□□□□ -0.15
NCKAP1L-208	ENST00000552211	ZNF831	Q5JPB2	1677 aa		14.14	□□□□□ -0.15
NCKAP1L-208	ENST00000552211	KIF24	Q5T7B8	1368 aa		14.13	□□□□□ -0.15
NCKAP1L-208	ENST00000552211	SSFA2	P28290	1259 aa		14.13	□□□□□ -0.15
NCKAP1L-208	ENST00000552211	HTRA3	P83110	453 aa		14.13	□□□□□ -0.15
NCKAP1L-208	ENST00000552211	SMARCC1	Q92922	1105 aa	Predicted RBP	14.13	□□□□□ -0.15
NCKAP1L-208	ENST00000552211	TMOD3	Q9NYL9	352 aa		14.13	□□□□□ -0.15
NCKAP1L-208	ENST00000552211	C10orf71	Q711Q0	1435 aa		14.13	□□□□□ -0.15
NCKAP1L-208	ENST00000552211	AFDN	P55196	1824 aa	Known RBP	14.13	□□□□□ -0.15
NCKAP1L-208	ENST00000552211	WDR90	Q96KV7	1748 aa		14.12	□□□□□ -0.15
NCKAP1L-208	ENST00000552211	CCDC88A	Q3V6T2	1871 aa		14.12	□□□□□ -0.15
NCKAP1L-208	ENST00000552211	SCN11A	Q9UI33	1791 aa		14.12	□□□□□ -0.15
NCKAP1L-208	ENST00000552211	AEBP1	Q8IUX7	1158 aa		14.12	□□□□□ -0.15
NCKAP1L-208	ENST00000552211	FLAD1	Q8NFF5	587 aa		14.12	□□□□□ -0.15
NCKAP1L-208	ENST00000552211	NMRK2	Q9NPI5	230 aa		14.11	□□□□□ -0.15
NCKAP1L-208	ENST00000552211	DPEP1	P16444	411 aa		14.1	□□□□□ -0.15
NCKAP1L-208	ENST00000552211	KCNA3	P22001	575 aa		14.1	□□□□□ -0.15
NCKAP1L-208	ENST00000552211	ARHGEF1	Q92888	912 aa	Known RBP	14.1	□□□□□ -0.15
NCKAP1L-208	ENST00000552211	POLR3GL	Q9BT43	218 aa		14.1	□□□□□ -0.15
NCKAP1L-208	ENST00000552211	RBM42	Q9BTD8	480 aa	Known RBP	14.1	□□□□□ -0.15
NCKAP1L-208	ENST00000552211	SRP68	Q9UHB9	627 aa	Known RBP	14.1	□□□□□ -0.15
NCKAP1L-208	ENST00000552211	SPG7	Q9UQ90	795 aa		14.1	□□□□□ -0.15
NCKAP1L-208	ENST00000552211	BCS1L	Q9Y276	419 aa		14.1	□□□□□ -0.15
NCKAP1L-208	ENST00000552211	GYS1	P13807	737 aa		14.09	□□□□□ -0.15
NCKAP1L-208	ENST00000552211	IFNL2	Q8IZJ0	200 aa		14.08	□□□□□ -0.16
NCKAP1L-208	ENST00000552211	DDR1	Q08345	913 aa		14.07	□□□□□ -0.16
NCKAP1L-208	ENST00000552211	DNAJC5G	Q8N7S2	189 aa		14.07	□□□□□ -0.16
NCKAP1L-208	ENST00000552211	KCP	Q6ZWJ8	1503 aa		14.06	□□□□□ -0.16
NCKAP1L-208	ENST00000552211	PTCD1	O75127	700 aa	Known RBP	14.05	□□□□□ -0.16
NCKAP1L-208	ENST00000552211	PRELP	P51888	382 aa		14.05	□□□□□ -0.16
NCKAP1L-208	ENST00000552211	FKBP8	Q14318	412 aa		14.05	□□□□□ -0.16
NCKAP1L-208	ENST00000552211	ARHGAP27	Q6ZUM4	889 aa		14.05	□□□□□ -0.16
NCKAP1L-208	ENST00000552211	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	14.05	□□□□□ -0.16
NCKAP1L-208	ENST00000552211	PCNT	O95613	3336 aa		14.04	□□□□□ -0.16
NCKAP1L-208	ENST00000552211	CHRNA5	P30532	468 aa		14.04	□□□□□ -0.16
NCKAP1L-208	ENST00000552211	TRAPPC3L	Q5T215	181 aa		14.04	□□□□□ -0.16
NCKAP1L-208	ENST00000552211	ZNF530	Q6P9A1	599 aa	Predicted RBP	14.04	□□□□□ -0.16
NCKAP1L-208	ENST00000552211	RTCB	Q9Y3I0	505 aa	Known RBP	14.04	□□□□□ -0.16
NCKAP1L-208	ENST00000552211	DLEC1	Q9Y238	1755 aa		14.04	□□□□□ -0.16
NCKAP1L-208	ENST00000552211	ANKRD31	Q8N7Z5	1873 aa		14.04	□□□□□ -0.16
NCKAP1L-208	ENST00000552211	FCHSD2	O94868	740 aa		14.03	□□□□□ -0.16
NCKAP1L-208	ENST00000552211	CACNA1S	Q13698	1873 aa		14.03	□□□□□ -0.16
NCKAP1L-208	ENST00000552211	TIAM2	Q8IVF5	1701 aa		14.02	□□□□□ -0.16
NCKAP1L-208	ENST00000552211	NRXN2	Q9P2S2	1712 aa		14.02	□□□□□ -0.16
NCKAP1L-208	ENST00000552211	CNTNAP4	Q9C0A0	1308 aa		14.02	□□□□□ -0.17
NCKAP1L-208	ENST00000552211	RPS6KA4	O75676	772 aa		14.02	□□□□□ -0.17
NCKAP1L-208	ENST00000552211	CRKL	P46109	303 aa	Known RBP	14.02	□□□□□ -0.17
NCKAP1L-208	ENST00000552211	C9orf131	Q5VYM1	1079 aa		14.02	□□□□□ -0.17
NCKAP1L-208	ENST00000552211	NFATC2IP	Q8NCF5	419 aa		14.01	□□□□□ -0.17
NCKAP1L-208	ENST00000552211	COL11A2	P13942	1736 aa	Predicted RBP	14.01	□□□□□ -0.17
NCKAP1L-208	ENST00000552211	ERVV-2	B6SEH9	535 aa		14	□□□□□ -0.17
NCKAP1L-208	ENST00000552211	TGFB2	P61812	414 aa		14	□□□□□ -0.17
NCKAP1L-208	ENST00000552211	RASSF7	Q02833	373 aa		14	□□□□□ -0.17
NCKAP1L-208	ENST00000552211	RC3H1	Q5TC82	1133 aa	Known RBP	14	□□□□□ -0.17
NCKAP1L-208	ENST00000552211	INTS5	Q6P9B9	1019 aa	Known RBP	14	□□□□□ -0.17
NCKAP1L-208	ENST00000552211	PANK3	Q9H999	370 aa		14	□□□□□ -0.17
NCKAP1L-208	ENST00000552211	TNRC6C	Q9HCJ0	1690 aa	Known RBP	14	□□□□□ -0.17
NCKAP1L-208	ENST00000552211	UBR2	Q8IWV8	1755 aa		13.99	□□□□□ -0.17
NCKAP1L-208	ENST00000552211	CARMIL3	Q8ND23	1372 aa		13.99	□□□□□ -0.17
NCKAP1L-208	ENST00000552211	USP42	Q9H9J4	1324 aa	Known RBP	13.99	□□□□□ -0.17
NCKAP1L-208	ENST00000552211	SLC24A1	O60721	1099 aa		13.99	□□□□□ -0.17
NCKAP1L-208	ENST00000552211	RFC4	P35249	363 aa		13.99	□□□□□ -0.17
NCKAP1L-208	ENST00000552211	CABP4	P57796	275 aa		13.99	□□□□□ -0.17
NCKAP1L-208	ENST00000552211	SLC39A6	Q13433	755 aa		13.99	□□□□□ -0.17
NCKAP1L-208	ENST00000552211	CDCA8	Q53HL2	280 aa		13.99	□□□□□ -0.17
NCKAP1L-208	ENST00000552211	DNAJC10	Q8IXB1	793 aa		13.99	□□□□□ -0.17
NCKAP1L-208	ENST00000552211	NLGN1	Q8N2Q7	840 aa		13.99	□□□□□ -0.17
NCKAP1L-208	ENST00000552211	DCAF5	Q96JK2	942 aa		13.99	□□□□□ -0.17
NCKAP1L-208	ENST00000552211	LGR6	Q9HBX8	967 aa		13.99	□□□□□ -0.17
NCKAP1L-208	ENST00000552211	CCDC87	Q9NVE4	849 aa		13.99	□□□□□ -0.17
NCKAP1L-208	ENST00000552211	POLRMT	O00411	1230 aa	Known RBP	13.98	□□□□□ -0.17
NCKAP1L-208	ENST00000552211	TOMM70	O94826	608 aa		13.98	□□□□□ -0.17
NCKAP1L-208	ENST00000552211	HSPA5	P11021	654 aa	Known RBP	13.98	□□□□□ -0.17
NCKAP1L-208	ENST00000552211	PARP3	Q9Y6F1	533 aa		13.98	□□□□□ -0.17
NCKAP1L-208	ENST00000552211	BCL2L12	Q9HB09	334 aa		13.97	□□□□□ -0.17
NCKAP1L-208	ENST00000552211	MRC1	P22897	1456 aa		13.96	□□□□□ -0.17
NCKAP1L-208	ENST00000552211	MTHFS	P49914	203 aa		13.96	□□□□□ -0.17
NCKAP1L-208	ENST00000552211	APLP1	P51693	650 aa		13.96	□□□□□ -0.17
NCKAP1L-208	ENST00000552211	PLEKHO1	Q53GL0	409 aa	Predicted RBP	13.96	□□□□□ -0.17
NCKAP1L-208	ENST00000552211	COL13A1	Q5TAT6	717 aa	Predicted RBP	13.96	□□□□□ -0.17
NCKAP1L-208	ENST00000552211	SULT6B1	Q6IMI4	303 aa		13.96	□□□□□ -0.17
NCKAP1L-208	ENST00000552211	RRAGC	Q9HB90	399 aa		13.96	□□□□□ -0.17
NCKAP1L-208	ENST00000552211	RNF181	Q9P0P0	153 aa		13.96	□□□□□ -0.17
NCKAP1L-208	ENST00000552211	SIPA1L3	O60292	1781 aa	Predicted RBP	13.96	□□□□□ -0.18
NCKAP1L-208	ENST00000552211	ADRA2B	P18089	450 aa		13.95	□□□□□ -0.18
NCKAP1L-208	ENST00000552211	TM4SF1	P30408	202 aa		13.95	□□□□□ -0.18
NCKAP1L-208	ENST00000552211	IL13	P35225	146 aa		13.95	□□□□□ -0.18
NCKAP1L-208	ENST00000552211	USPL1	Q5W0Q7	1092 aa		13.95	□□□□□ -0.18
NCKAP1L-208	ENST00000552211	SOS1	Q07889	1333 aa	Predicted RBP	13.94	□□□□□ -0.18
NCKAP1L-208	ENST00000552211	DICER1	Q9UPY3	1922 aa	Known RBP	13.94	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms