RNA–Protein interactions for RNA: ENST00000551800.5

CDK4-209, Transcript of cyclin dependent kinase 4, humanhuman

TSL 5

Gene CDK4, Length 773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-209ENST00000551800 KIF13BQ9NQT8 1826 aa23.37■■□□□ 1.33
CDK4-209ENST00000551800 SENP3-EIF4A1A0A087X0R7 540 aa23.36■■□□□ 1.33
CDK4-209ENST00000551800 CD2APQ9Y5K6 639 aa23.36■■□□□ 1.33
CDK4-209ENST00000551800 IGSF1Q8N6C5 1336 aa23.35■■□□□ 1.33
CDK4-209ENST00000551800 PLEKHO1Q53GL0 409 aaPredicted RBP23.35■■□□□ 1.33
CDK4-209ENST00000551800 C1orf141Q5JVX7 400 aa23.35■■□□□ 1.33
CDK4-209ENST00000551800 LINC00116Q8NCU8 138 aa23.35■■□□□ 1.33
CDK4-209ENST00000551800 RBM42Q9BTD8 480 aaKnown RBP23.35■■□□□ 1.33
CDK4-209ENST00000551800 ASAP1Q9ULH1 1129 aa23.35■■□□□ 1.33
CDK4-209ENST00000551800 KNSTRNQ9Y448 316 aa23.35■■□□□ 1.33
CDK4-209ENST00000551800 ZNF530Q6P9A1 599 aaPredicted RBP23.34■■□□□ 1.33
CDK4-209ENST00000551800 GOLGB1Q14789 3259 aaKnown RBP23.34■■□□□ 1.33
CDK4-209ENST00000551800 YBX3P16989 372 aaKnown RBP eCLIP23.33■■□□□ 1.332e-7■□□□□ 9.7
CDK4-209ENST00000551800 CICQ96RK0 1608 aaPredicted RBP23.32■■□□□ 1.32
CDK4-209ENST00000551800 MYH14Q7Z406 1995 aaKnown RBP23.31■■□□□ 1.32
CDK4-209ENST00000551800 C1QTNF8P60827 252 aa23.31■■□□□ 1.32
CDK4-209ENST00000551800 AMOTQ4VCS5 1084 aa23.31■■□□□ 1.32
CDK4-209ENST00000551800 DCAF5Q96JK2 942 aa23.31■■□□□ 1.32
CDK4-209ENST00000551800 TJP1Q07157 1748 aa23.3■■□□□ 1.32
CDK4-209ENST00000551800 CABP4P57796 275 aa23.3■■□□□ 1.32
CDK4-209ENST00000551800 RTCBQ9Y3I0 505 aaKnown RBP23.3■■□□□ 1.32
CDK4-209ENST00000551800 ERVV-2B6SEH9 535 aa23.29■■□□□ 1.32
CDK4-209ENST00000551800 ATG3Q9NT62 314 aa23.29■■□□□ 1.32
CDK4-209ENST00000551800 WWC3Q9ULE0 1092 aa23.29■■□□□ 1.32
CDK4-209ENST00000551800 ITPK1Q13572 414 aa23.28■■□□□ 1.32
CDK4-209ENST00000551800 SMIM5Q71RC9 77 aa23.28■■□□□ 1.32
CDK4-209ENST00000551800 KDRP35968 1356 aa23.27■■□□□ 1.32
CDK4-209ENST00000551800 BRCA1P38398 1863 aaKnown RBP23.27■■□□□ 1.32
CDK4-209ENST00000551800 KDM6AO15550 1401 aaPredicted RBP23.26■■□□□ 1.31
CDK4-209ENST00000551800 ATP10DQ9P241 1426 aa23.26■■□□□ 1.31
CDK4-209ENST00000551800 KIAA1551Q9HCM1 1747 aa23.26■■□□□ 1.31
CDK4-209ENST00000551800 MTHFSP49914 203 aa23.26■■□□□ 1.31
CDK4-209ENST00000551800 TRAPPC3LQ5T215 181 aa23.26■■□□□ 1.31
CDK4-209ENST00000551800 AMIGO3Q86WK7 504 aa23.26■■□□□ 1.31
CDK4-209ENST00000551800 ARFGEF1Q9Y6D6 1849 aa23.25■■□□□ 1.31
CDK4-209ENST00000551800 SULT6B1Q6IMI4 303 aa23.24■■□□□ 1.31
CDK4-209ENST00000551800 MMP10P09238 476 aa23.23■■□□□ 1.31
CDK4-209ENST00000551800 RFC4P35249 363 aa23.23■■□□□ 1.31
CDK4-209ENST00000551800 AEBP1Q8IUX7 1158 aa23.22■■□□□ 1.31
CDK4-209ENST00000551800 GPBP1L1Q9HC44 474 aaPredicted RBP23.22■■□□□ 1.31
CDK4-209ENST00000551800 ADRA2BP18089 450 aa23.21■■□□□ 1.31
CDK4-209ENST00000551800 CNTNAP4Q9C0A0 1308 aa23.21■■□□□ 1.31
CDK4-209ENST00000551800 PTCD1O75127 700 aaKnown RBP23.2■■□□□ 1.3
CDK4-209ENST00000551800 ZNF526Q8TF50 670 aaPredicted RBP23.2■■□□□ 1.3
CDK4-209ENST00000551800 NLGN1Q8N2Q7 840 aa23.19■■□□□ 1.3
CDK4-209ENST00000551800 CCDC87Q9NVE4 849 aa23.19■■□□□ 1.3
CDK4-209ENST00000551800 PARP3Q9Y6F1 533 aa23.19■■□□□ 1.3
CDK4-209ENST00000551800 RC3H1Q5TC82 1133 aaKnown RBP23.17■■□□□ 1.3
CDK4-209ENST00000551800 AFDNP55196 1824 aaKnown RBP23.17■■□□□ 1.3
CDK4-209ENST00000551800 PXDNLA1KZ92 1463 aa23.17■■□□□ 1.3
CDK4-209ENST00000551800 NFATC2IPQ8NCF5 419 aa23.16■■□□□ 1.3
CDK4-209ENST00000551800 UBR2Q8IWV8 1755 aa23.16■■□□□ 1.3
CDK4-209ENST00000551800 C10orf71Q711Q0 1435 aa23.16■■□□□ 1.3
CDK4-209ENST00000551800 KIF7Q2M1P5 1343 aa23.15■■□□□ 1.3
CDK4-209ENST00000551800 RPS6KA4O75676 772 aa23.15■■□□□ 1.3
CDK4-209ENST00000551800 ARHGEF1Q92888 912 aaKnown RBP23.15■■□□□ 1.3
CDK4-209ENST00000551800 AKAP4Q5JQC9 854 aa23.14■■□□□ 1.29
CDK4-209ENST00000551800 BCS1LQ9Y276 419 aa23.14■■□□□ 1.29
CDK4-209ENST00000551800 CNGB1Q14028 1251 aaPredicted RBP23.13■■□□□ 1.29
CDK4-209ENST00000551800 SLC4A9Q96Q91 983 aa23.13■■□□□ 1.29
CDK4-209ENST00000551800 ADCY9O60503 1353 aa23.13■■□□□ 1.29
CDK4-209ENST00000551800 MRC1P22897 1456 aa23.12■■□□□ 1.29
CDK4-209ENST00000551800 HMOX1P09601 288 aa23.12■■□□□ 1.29
CDK4-209ENST00000551800 IL13P35225 146 aa23.12■■□□□ 1.29
CDK4-209ENST00000551800 CRKLP46109 303 aaKnown RBP23.12■■□□□ 1.29
CDK4-209ENST00000551800 TGFB2P61812 414 aa23.12■■□□□ 1.29
CDK4-209ENST00000551800 CC2D1BQ5T0F9 858 aaKnown RBP23.12■■□□□ 1.29
CDK4-209ENST00000551800 ADAMTS7Q9UKP4 1686 aa23.11■■□□□ 1.29
CDK4-209ENST00000551800 SIPA1L3O60292 1781 aaPredicted RBP23.1■■□□□ 1.29
CDK4-209ENST00000551800 DLEC1Q9Y238 1755 aa23.1■■□□□ 1.29
CDK4-209ENST00000551800 GYS1P13807 737 aa23.1■■□□□ 1.29
CDK4-209ENST00000551800 AMER1Q5JTC6 1135 aaPredicted RBP23.1■■□□□ 1.29
CDK4-209ENST00000551800 CCDC88AQ3V6T2 1871 aa23.1■■□□□ 1.29
CDK4-209ENST00000551800 CACNA1SQ13698 1873 aa23.09■■□□□ 1.29
CDK4-209ENST00000551800 DIAPH1O60610 1272 aaKnown RBP23.09■■□□□ 1.29
CDK4-209ENST00000551800 ZPR1O75312 459 aa23.08■■□□□ 1.29
CDK4-209ENST00000551800 FCHSD2O94868 740 aa23.08■■□□□ 1.29
CDK4-209ENST00000551800 SLC52A2Q9HAB3 445 aa23.08■■□□□ 1.29
CDK4-209ENST00000551800 SBF1O95248 1867 aa23.07■■□□□ 1.28
CDK4-209ENST00000551800 A0A0G2JLW4 131 aa23.07■■□□□ 1.28
CDK4-209ENST00000551800 USP42Q9H9J4 1324 aaKnown RBP23.07■■□□□ 1.28
CDK4-209ENST00000551800 U2SURPO15042 1029 aaKnown RBP23.05■■□□□ 1.28
CDK4-209ENST00000551800 ARHGAP27Q6ZUM4 889 aa23.05■■□□□ 1.28
CDK4-209ENST00000551800 TTC5Q8N0Z6 440 aa23.05■■□□□ 1.28
CDK4-209ENST00000551800 SRP68Q9UHB9 627 aaKnown RBP23.05■■□□□ 1.28
CDK4-209ENST00000551800 KCPQ6ZWJ8 1503 aa23.04■■□□□ 1.28
CDK4-209ENST00000551800 TNRC6CQ9HCJ0 1690 aaKnown RBP23.04■■□□□ 1.28
CDK4-209ENST00000551800 SCN7AQ01118 1682 aa23.03■■□□□ 1.28
CDK4-209ENST00000551800 COL15A1P39059 1388 aa23.03■■□□□ 1.28
CDK4-209ENST00000551800 RNMTO43148 476 aaKnown RBP23.03■■□□□ 1.28
CDK4-209ENST00000551800 DPEP1P16444 411 aa23.03■■□□□ 1.28
CDK4-209ENST00000551800 DNAJC10Q8IXB1 793 aa23.03■■□□□ 1.28
CDK4-209ENST00000551800 TIAM2Q8IVF5 1701 aa23.02■■□□□ 1.28
CDK4-209ENST00000551800 NRXN2Q9P2S2 1712 aa23.02■■□□□ 1.28
CDK4-209ENST00000551800 SLC39A6Q13433 755 aa23.01■■□□□ 1.27
CDK4-209ENST00000551800 LGR6Q9HBX8 967 aa23.01■■□□□ 1.27
CDK4-209ENST00000551800 PIM2Q9P1W9 311 aa23.01■■□□□ 1.27
CDK4-209ENST00000551800 TEFQ10587 303 aa23■■□□□ 1.27
CDK4-209ENST00000551800 FKBP8Q14318 412 aa23■■□□□ 1.27
CDK4-209ENST00000551800 MTHFSDQ2M296 383 aaKnown RBP22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms