RNA–Protein interactions for RNA: ENST00000551705.1

TMEM106C-217, Transcript of transmembrane protein 106C, humanhuman

TSL 3

Gene TMEM106C, Length 666 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-217ENST00000551705 RRAGCQ9HB90 399 aa19.03■□□□□ 0.64
TMEM106C-217ENST00000551705 CYP27B1O15528 508 aa19.02■□□□□ 0.64
TMEM106C-217ENST00000551705 HMGB2P26583 209 aaKnown RBP19.02■□□□□ 0.64
TMEM106C-217ENST00000551705 ITPK1Q13572 414 aa19.02■□□□□ 0.64
TMEM106C-217ENST00000551705 SMARCC1Q92922 1105 aaPredicted RBP19.02■□□□□ 0.64
TMEM106C-217ENST00000551705 L3MBTL2Q969R5 705 aa19.02■□□□□ 0.64
TMEM106C-217ENST00000551705 SMC1BQ8NDV3 1235 aa19.01■□□□□ 0.63
TMEM106C-217ENST00000551705 PIGBQ92521 554 aa19.01■□□□□ 0.63
TMEM106C-217ENST00000551705 RNF181Q9P0P0 153 aa19.01■□□□□ 0.63
TMEM106C-217ENST00000551705 CCDC88AQ3V6T2 1871 aa19.01■□□□□ 0.63
TMEM106C-217ENST00000551705 LOC102724428A0A0B4J2F2 783 aa19■□□□□ 0.63
TMEM106C-217ENST00000551705 TATP17735 454 aaPredicted RBP19■□□□□ 0.63
TMEM106C-217ENST00000551705 SIK1P57059 783 aa19■□□□□ 0.63
TMEM106C-217ENST00000551705 SMG6Q86US8 1419 aaKnown RBP19■□□□□ 0.63
TMEM106C-217ENST00000551705 RRS1Q15050 365 aaKnown RBP18.98■□□□□ 0.63
TMEM106C-217ENST00000551705 COG3Q96JB2 828 aa18.98■□□□□ 0.63
TMEM106C-217ENST00000551705 TERF2IPQ9NYB0 399 aa18.98■□□□□ 0.63
TMEM106C-217ENST00000551705 KCNA3P22001 575 aa18.97■□□□□ 0.63
TMEM106C-217ENST00000551705 KIF20BQ96Q89 1820 aa18.97■□□□□ 0.63
TMEM106C-217ENST00000551705 MYH14Q7Z406 1995 aaKnown RBP18.97■□□□□ 0.63
TMEM106C-217ENST00000551705 ZNF831Q5JPB2 1677 aa18.96■□□□□ 0.63
TMEM106C-217ENST00000551705 DCAF5Q96JK2 942 aa18.95■□□□□ 0.62
TMEM106C-217ENST00000551705 CCDC87Q9NVE4 849 aa18.95■□□□□ 0.62
TMEM106C-217ENST00000551705 KDRP35968 1356 aa18.93■□□□□ 0.62
TMEM106C-217ENST00000551705 ATP6V1AP38606 617 aa18.93■□□□□ 0.62
TMEM106C-217ENST00000551705 ASAP1Q9ULH1 1129 aa18.93■□□□□ 0.62
TMEM106C-217ENST00000551705 DLEC1Q9Y238 1755 aa18.93■□□□□ 0.62
TMEM106C-217ENST00000551705 TMF1P82094 1093 aa18.92■□□□□ 0.62
TMEM106C-217ENST00000551705 GYS1P13807 737 aa18.91■□□□□ 0.62
TMEM106C-217ENST00000551705 NLGN1Q8N2Q7 840 aa18.91■□□□□ 0.62
TMEM106C-217ENST00000551705 KDM6AO15550 1401 aaPredicted RBP18.91■□□□□ 0.62
TMEM106C-217ENST00000551705 RASSF7Q02833 373 aa18.9■□□□□ 0.62
TMEM106C-217ENST00000551705 HSP90AB2PQ58FF8 381 aa18.9■□□□□ 0.62
TMEM106C-217ENST00000551705 DALRD3Q5D0E6 543 aaKnown RBP18.9■□□□□ 0.62
TMEM106C-217ENST00000551705 PIM2Q9P1W9 311 aa18.9■□□□□ 0.62
TMEM106C-217ENST00000551705 INSRP06213 1382 aa18.9■□□□□ 0.62
TMEM106C-217ENST00000551705 TMOD3Q9NYL9 352 aa18.89■□□□□ 0.61
TMEM106C-217ENST00000551705 RTCBQ9Y3I0 505 aaKnown RBP18.89■□□□□ 0.61
TMEM106C-217ENST00000551705 PARP3Q9Y6F1 533 aa18.89■□□□□ 0.61
TMEM106C-217ENST00000551705 NCAPD2Q15021 1401 aa18.89■□□□□ 0.61
TMEM106C-217ENST00000551705 ANKRD26Q9UPS8 1709 aa18.88■□□□□ 0.61
TMEM106C-217ENST00000551705 AFDNP55196 1824 aaKnown RBP18.88■□□□□ 0.61
TMEM106C-217ENST00000551705 CHRNA5P30532 468 aa18.88■□□□□ 0.61
TMEM106C-217ENST00000551705 NKX1-1Q15270 411 aaPredicted RBP18.88■□□□□ 0.61
TMEM106C-217ENST00000551705 TRAPPC3LQ5T215 181 aa18.88■□□□□ 0.61
TMEM106C-217ENST00000551705 ARHGEF1Q92888 912 aaKnown RBP18.88■□□□□ 0.61
TMEM106C-217ENST00000551705 FOXN1O15353 648 aa18.87■□□□□ 0.61
TMEM106C-217ENST00000551705 ADAMTS7Q9UKP4 1686 aa18.86■□□□□ 0.61
TMEM106C-217ENST00000551705 FLT4P35916 1363 aa18.86■□□□□ 0.61
TMEM106C-217ENST00000551705 SLC4A9Q96Q91 983 aa18.86■□□□□ 0.61
TMEM106C-217ENST00000551705 ATG3Q9NT62 314 aa18.86■□□□□ 0.61
TMEM106C-217ENST00000551705 MKRN1Q9UHC7 482 aaKnown RBP18.86■□□□□ 0.61
TMEM106C-217ENST00000551705 VIRMAQ69YN4 1812 aaKnown RBP18.86■□□□□ 0.61
TMEM106C-217ENST00000551705 DICER1Q9UPY3 1922 aaKnown RBP18.85■□□□□ 0.61
TMEM106C-217ENST00000551705 FAM161AQ3B820 660 aa18.85■□□□□ 0.61
TMEM106C-217ENST00000551705 TJP1Q07157 1748 aa18.85■□□□□ 0.61
TMEM106C-217ENST00000551705 ZC3H4Q9UPT8 1303 aaKnown RBP18.84■□□□□ 0.61
TMEM106C-217ENST00000551705 VEGFAP15692 232 aaPredicted RBP18.84■□□□□ 0.61
TMEM106C-217ENST00000551705 DDR1Q08345 913 aa18.84■□□□□ 0.61
TMEM106C-217ENST00000551705 SIN3AQ96ST3 1273 aa18.84■□□□□ 0.61
TMEM106C-217ENST00000551705 GGNBP2Q9H3C7 697 aa18.84■□□□□ 0.61
TMEM106C-217ENST00000551705 CNTNAP4Q9C0A0 1308 aa18.82■□□□□ 0.6
TMEM106C-217ENST00000551705 GLTPD2A6NH11 291 aa18.82■□□□□ 0.6
TMEM106C-217ENST00000551705 RFC4P35249 363 aa18.82■□□□□ 0.6
TMEM106C-217ENST00000551705 CARD11Q9BXL7 1154 aa18.82■□□□□ 0.6
TMEM106C-217ENST00000551705 SRP68Q9UHB9 627 aaKnown RBP18.81■□□□□ 0.6
TMEM106C-217ENST00000551705 NRXN2Q9P2S2 1712 aa18.8■□□□□ 0.6
TMEM106C-217ENST00000551705 POTECB2RU33 542 aa18.8■□□□□ 0.6
TMEM106C-217ENST00000551705 PRDM10Q9NQV6 1147 aa18.8■□□□□ 0.6
TMEM106C-217ENST00000551705 SPG7Q9UQ90 795 aa18.8■□□□□ 0.6
TMEM106C-217ENST00000551705 FYB1O15117 783 aa18.79■□□□□ 0.6
TMEM106C-217ENST00000551705 RPS6KA4O75676 772 aa18.79■□□□□ 0.6
TMEM106C-217ENST00000551705 LMNB1P20700 586 aa18.79■□□□□ 0.6
TMEM106C-217ENST00000551705 FKBP8Q14318 412 aa18.79■□□□□ 0.6
TMEM106C-217ENST00000551705 PUS7Q96PZ0 661 aaKnown RBP18.79■□□□□ 0.6
TMEM106C-217ENST00000551705 KIF24Q5T7B8 1368 aa18.79■□□□□ 0.6
TMEM106C-217ENST00000551705 PHKG2P15735 406 aa18.78■□□□□ 0.6
TMEM106C-217ENST00000551705 RC3H1Q5TC82 1133 aaKnown RBP18.78■□□□□ 0.6
TMEM106C-217ENST00000551705 RBM42Q9BTD8 480 aaKnown RBP18.78■□□□□ 0.6
TMEM106C-217ENST00000551705 CREBZFQ9NS37 354 aa18.78■□□□□ 0.6
TMEM106C-217ENST00000551705 PCDH10Q9P2E7 1040 aa18.77■□□□□ 0.6
TMEM106C-217ENST00000551705 EMILIN1Q9Y6C2 1016 aa18.77■□□□□ 0.6
TMEM106C-217ENST00000551705 CNTNAP1P78357 1384 aa18.77■□□□□ 0.6
TMEM106C-217ENST00000551705 FER1L6Q2WGJ9 1857 aa18.77■□□□□ 0.6
TMEM106C-217ENST00000551705 USP42Q9H9J4 1324 aaKnown RBP18.76■□□□□ 0.59
TMEM106C-217ENST00000551705 CACNA1SQ13698 1873 aa18.76■□□□□ 0.59
TMEM106C-217ENST00000551705 NEUROD1Q13562 356 aa18.76■□□□□ 0.59
TMEM106C-217ENST00000551705 COL11A2P13942 1736 aaPredicted RBP18.75■□□□□ 0.59
TMEM106C-217ENST00000551705 TONSLQ96HA7 1378 aa18.75■□□□□ 0.59
TMEM106C-217ENST00000551705 ANKRD31Q8N7Z5 1873 aa18.74■□□□□ 0.59
TMEM106C-217ENST00000551705 POLRMTO00411 1230 aaKnown RBP18.74■□□□□ 0.59
TMEM106C-217ENST00000551705 POTEIP0CG38 1075 aa18.74■□□□□ 0.59
TMEM106C-217ENST00000551705 POTEJP0CG39 1038 aa18.74■□□□□ 0.59
TMEM106C-217ENST00000551705 CTCFP49711 727 aaPredicted RBP18.74■□□□□ 0.59
TMEM106C-217ENST00000551705 IFNL2Q8IZJ0 200 aa18.74■□□□□ 0.59
TMEM106C-217ENST00000551705 ABHD8Q96I13 439 aa18.74■□□□□ 0.59
TMEM106C-217ENST00000551705 TESK2Q96S53 571 aa18.74■□□□□ 0.59
TMEM106C-217ENST00000551705 NFKBIEO00221 500 aa18.73■□□□□ 0.59
TMEM106C-217ENST00000551705 LBX1P52954 281 aa18.72■□□□□ 0.59
TMEM106C-217ENST00000551705 AIDAQ96BJ3 306 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms