RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 NOP58Q9Y2X3 529 aaKnown RBP14.52□□□□□ -0.09
RAB5C-208ENST00000551338 MRC1P22897 1456 aa14.51□□□□□ -0.09
RAB5C-208ENST00000551338 PLEKHG2Q9H7P9 1386 aa14.51□□□□□ -0.09
RAB5C-208ENST00000551338 SOS2Q07890 1332 aaPredicted RBP14.51□□□□□ -0.09
RAB5C-208ENST00000551338 CABLES1Q8TDN4 633 aa14.51□□□□□ -0.09
RAB5C-208ENST00000551338 LAMB4A4D0S4 1761 aa14.51□□□□□ -0.09
RAB5C-208ENST00000551338 EIF4A1P60842 406 aaKnown RBP14.5□□□□□ -0.09
RAB5C-208ENST00000551338 NUCB1Q02818 461 aa14.5□□□□□ -0.09
RAB5C-208ENST00000551338 CCDC30Q5VVM6 783 aa14.5□□□□□ -0.09
RAB5C-208ENST00000551338 ANP32EQ9BTT0 268 aa14.5□□□□□ -0.09
RAB5C-208ENST00000551338 STK31Q9BXU1 1019 aa14.5□□□□□ -0.09
RAB5C-208ENST00000551338 KDM6AO15550 1401 aaPredicted RBP14.49□□□□□ -0.09
RAB5C-208ENST00000551338 C1orf141Q5JVX7 400 aa14.49□□□□□ -0.09
RAB5C-208ENST00000551338 MPRIPQ6WCQ1 1025 aa14.49□□□□□ -0.09
RAB5C-208ENST00000551338 TUBGCP6Q96RT7 1819 aa14.49□□□□□ -0.09
RAB5C-208ENST00000551338 GLI3P10071 1580 aa14.48□□□□□ -0.09
RAB5C-208ENST00000551338 F6X3S4 739 aa14.48□□□□□ -0.09
RAB5C-208ENST00000551338 KCNQ3O43525 872 aa14.48□□□□□ -0.09
RAB5C-208ENST00000551338 TEFQ10587 303 aa14.48□□□□□ -0.09
RAB5C-208ENST00000551338 FLIIQ13045 1269 aa14.48□□□□□ -0.09
RAB5C-208ENST00000551338 CHRNA2Q15822 529 aa14.48□□□□□ -0.09
RAB5C-208ENST00000551338 GCC1Q96CN9 775 aa14.48□□□□□ -0.09
RAB5C-208ENST00000551338 MEIS3Q99687 375 aa14.48□□□□□ -0.09
RAB5C-208ENST00000551338 HOXB7P09629 217 aa14.47□□□□□ -0.09
RAB5C-208ENST00000551338 CCT4P50991 539 aaKnown RBP14.47□□□□□ -0.09
RAB5C-208ENST00000551338 ERICH6Q7L0X2 663 aa14.47□□□□□ -0.09
RAB5C-208ENST00000551338 ANKRD44Q8N8A2 993 aa14.47□□□□□ -0.09
RAB5C-208ENST00000551338 NECTIN2Q92692 538 aa14.47□□□□□ -0.09
RAB5C-208ENST00000551338 PAPPAQ13219 1627 aa14.47□□□□□ -0.09
RAB5C-208ENST00000551338 HEG1Q9ULI3 1381 aa14.47□□□□□ -0.09
RAB5C-208ENST00000551338 WNK3Q9BYP7 1800 aa14.46□□□□□ -0.09
RAB5C-208ENST00000551338 HDGFL1Q5TGJ6 251 aa14.46□□□□□ -0.09
RAB5C-208ENST00000551338 CHD1LQ86WJ1 897 aa14.46□□□□□ -0.09
RAB5C-208ENST00000551338 LNPKQ9C0E8 428 aa14.46□□□□□ -0.09
RAB5C-208ENST00000551338 NLRP2Q9NX02 1062 aa14.46□□□□□ -0.09
RAB5C-208ENST00000551338 SLAIN2Q9P270 581 aa14.46□□□□□ -0.09
RAB5C-208ENST00000551338 UBR2Q8IWV8 1755 aa14.46□□□□□ -0.09
RAB5C-208ENST00000551338 ROBO1Q9Y6N7 1651 aa14.46□□□□□ -0.1
RAB5C-208ENST00000551338 COL5A2P05997 1499 aaPredicted RBP14.45□□□□□ -0.1
RAB5C-208ENST00000551338 BTBD11A6QL63 1104 aa14.45□□□□□ -0.1
RAB5C-208ENST00000551338 SEC24BO95487 1268 aa14.45□□□□□ -0.1
RAB5C-208ENST00000551338 TATP17735 454 aaPredicted RBP14.45□□□□□ -0.1
RAB5C-208ENST00000551338 CEP85Q6P2H3 762 aa14.45□□□□□ -0.1
RAB5C-208ENST00000551338 RAPGEF4Q8WZA2 1011 aa14.45□□□□□ -0.1
RAB5C-208ENST00000551338 RPAP2Q8IXW5 612 aaPredicted RBP14.44□□□□□ -0.1
RAB5C-208ENST00000551338 DDRGK1Q96HY6 314 aa14.44□□□□□ -0.1
RAB5C-208ENST00000551338 DCTPP1Q9H773 170 aa14.44□□□□□ -0.1
RAB5C-208ENST00000551338 ZBTB47Q9UFB7 747 aaPredicted RBP14.44□□□□□ -0.1
RAB5C-208ENST00000551338 COL22A1Q8NFW1 1626 aaPredicted RBP14.44□□□□□ -0.1
RAB5C-208ENST00000551338 TOGARAM1Q9Y4F4 1720 aa14.44□□□□□ -0.1
RAB5C-208ENST00000551338 CSB-PGBD3P0DP91 1061 aa14.43□□□□□ -0.1
RAB5C-208ENST00000551338 PHKG2P15735 406 aa14.43□□□□□ -0.1
RAB5C-208ENST00000551338 FKBP5Q13451 457 aaPredicted RBP14.43□□□□□ -0.1
RAB5C-208ENST00000551338 ANKRD45Q5TZF3 282 aa14.43□□□□□ -0.1
RAB5C-208ENST00000551338 SLC4A10Q6U841 1118 aa14.43□□□□□ -0.1
RAB5C-208ENST00000551338 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.43□□□□□ -0.1
RAB5C-208ENST00000551338 AHDC1Q5TGY3 1603 aaPredicted RBP14.43□□□□□ -0.1
RAB5C-208ENST00000551338 COL16A1Q07092 1604 aaPredicted RBP14.42□□□□□ -0.1
RAB5C-208ENST00000551338 PHAXQ9H814 394 aaKnown RBP14.42□□□□□ -0.1
RAB5C-208ENST00000551338 AFDNP55196 1824 aaKnown RBP14.42□□□□□ -0.1
RAB5C-208ENST00000551338 COL14A1Q05707 1796 aaKnown RBP14.42□□□□□ -0.1
RAB5C-208ENST00000551338 CHPF2Q9P2E5 772 aa14.41□□□□□ -0.1
RAB5C-208ENST00000551338 SPG7Q9UQ90 795 aa14.41□□□□□ -0.1
RAB5C-208ENST00000551338 PLCH1Q4KWH8 1693 aa14.41□□□□□ -0.1
RAB5C-208ENST00000551338 WDR17Q8IZU2 1322 aa14.41□□□□□ -0.1
RAB5C-208ENST00000551338 ARFGEF2Q9Y6D5 1785 aa14.4□□□□□ -0.1
RAB5C-208ENST00000551338 EIF2S2P20042 333 aaKnown RBP14.4□□□□□ -0.1
RAB5C-208ENST00000551338 PRDM11Q9NQV5 511 aa14.4□□□□□ -0.1
RAB5C-208ENST00000551338 LTBP4Q8N2S1 1624 aa14.4□□□□□ -0.1
RAB5C-208ENST00000551338 ADCY9O60503 1353 aa14.39□□□□□ -0.11
RAB5C-208ENST00000551338 GIGYF1O75420 1035 aaPredicted RBP14.39□□□□□ -0.11
RAB5C-208ENST00000551338 IFNL2Q8IZJ0 200 aa14.39□□□□□ -0.11
RAB5C-208ENST00000551338 SLC52A2Q9HAB3 445 aa14.39□□□□□ -0.11
RAB5C-208ENST00000551338 AK9Q5TCS8 1911 aa14.39□□□□□ -0.11
RAB5C-208ENST00000551338 ITGB4P16144 1822 aa14.38□□□□□ -0.11
RAB5C-208ENST00000551338 CYP27B1O15528 508 aa14.38□□□□□ -0.11
RAB5C-208ENST00000551338 GNAI3P08754 354 aa14.38□□□□□ -0.11
RAB5C-208ENST00000551338 CHMP4AQ9BY43 222 aa14.38□□□□□ -0.11
RAB5C-208ENST00000551338 PRAMEF22A3QJZ6 481 aa14.37□□□□□ -0.11
RAB5C-208ENST00000551338 ANXA1P04083 346 aa14.37□□□□□ -0.11
RAB5C-208ENST00000551338 GNAI2P04899 355 aa14.37□□□□□ -0.11
RAB5C-208ENST00000551338 BMP2KLQ5H9B9 411 aa14.37□□□□□ -0.11
RAB5C-208ENST00000551338 TBC1D32Q96NH3 1257 aa14.37□□□□□ -0.11
RAB5C-208ENST00000551338 NUP188Q5SRE5 1749 aa14.36□□□□□ -0.11
RAB5C-208ENST00000551338 PLEKHM2Q8IWE5 1019 aa14.36□□□□□ -0.11
RAB5C-208ENST00000551338 PHLPP1O60346 1717 aa14.35□□□□□ -0.11
RAB5C-208ENST00000551338 NRAPQ86VF7 1730 aa14.35□□□□□ -0.11
RAB5C-208ENST00000551338 HMMRO75330 724 aa14.35□□□□□ -0.11
RAB5C-208ENST00000551338 SLC39A6Q13433 755 aa14.35□□□□□ -0.11
RAB5C-208ENST00000551338 PROSER3Q2NL68 480 aa14.35□□□□□ -0.11
RAB5C-208ENST00000551338 ZNF790Q6PG37 636 aa14.35□□□□□ -0.11
RAB5C-208ENST00000551338 DNAAF4Q8WXU2 420 aa14.35□□□□□ -0.11
RAB5C-208ENST00000551338 DCAF5Q96JK2 942 aa14.35□□□□□ -0.11
RAB5C-208ENST00000551338 USP44Q9H0E7 712 aa14.35□□□□□ -0.11
RAB5C-208ENST00000551338 DBF4Q9UBU7 674 aaPredicted RBP14.35□□□□□ -0.11
RAB5C-208ENST00000551338 HSP90AB1P08238 724 aaKnown RBP14.34□□□□□ -0.11
RAB5C-208ENST00000551338 BEND3Q5T5X7 828 aa14.34□□□□□ -0.11
RAB5C-208ENST00000551338 SRCIN1Q9C0H9 1055 aa14.34□□□□□ -0.11
RAB5C-208ENST00000551338 LRRFIP2Q9Y608 721 aaKnown RBP14.34□□□□□ -0.11
RAB5C-208ENST00000551338 KCPQ6ZWJ8 1503 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms