RNA–Protein interactions for RNA: ENST00000550891.4

SCN8A-206, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 3,253 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-206ENST00000550891 PRDM11Q9NQV5 511 aa19.45■□□□□ 0.7
SCN8A-206ENST00000550891 F6X3S4 739 aa19.44■□□□□ 0.7
SCN8A-206ENST00000550891 RGPD2P0DJD1 1756 aa19.44■□□□□ 0.7
SCN8A-206ENST00000550891 PXDNQ92626 1479 aa19.44■□□□□ 0.7
SCN8A-206ENST00000550891 NUCB1Q02818 461 aa19.44■□□□□ 0.7
SCN8A-206ENST00000550891 CHD1LQ86WJ1 897 aa19.44■□□□□ 0.7
SCN8A-206ENST00000550891 STRCQ7RTU9 1775 aa19.44■□□□□ 0.7
SCN8A-206ENST00000550891 EIF4A1P60842 406 aaKnown RBP19.43■□□□□ 0.7
SCN8A-206ENST00000550891 HOXB7P09629 217 aa19.42■□□□□ 0.7
SCN8A-206ENST00000550891 RPAP2Q8IXW5 612 aaPredicted RBP19.42■□□□□ 0.7
SCN8A-206ENST00000550891 RGS12O14924 1447 aa19.41■□□□□ 0.7
SCN8A-206ENST00000550891 HMMRO75330 724 aa19.41■□□□□ 0.7
SCN8A-206ENST00000550891 ANP32EQ9BTT0 268 aa19.41■□□□□ 0.7
SCN8A-206ENST00000550891 MEIS3Q99687 375 aa19.41■□□□□ 0.7
SCN8A-206ENST00000550891 BCL11AQ9H165 835 aa19.41■□□□□ 0.7
SCN8A-206ENST00000550891 CPDO75976 1380 aa19.39■□□□□ 0.7
SCN8A-206ENST00000550891 SOS2Q07890 1332 aaPredicted RBP19.39■□□□□ 0.69
SCN8A-206ENST00000550891 IFNL2Q8IZJ0 200 aa19.39■□□□□ 0.69
SCN8A-206ENST00000550891 GNAI3P08754 354 aa19.38■□□□□ 0.69
SCN8A-206ENST00000550891 ANKRD44Q8N8A2 993 aa19.38■□□□□ 0.69
SCN8A-206ENST00000550891 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.38■□□□□ 0.69
SCN8A-206ENST00000550891 OVOS2A0A0G2JMS6 1433 aa19.38■□□□□ 0.69
SCN8A-206ENST00000550891 TOM1L2Q6ZVM7 507 aa19.38■□□□□ 0.69
SCN8A-206ENST00000550891 SIRT2Q8IXJ6 389 aa19.38■□□□□ 0.69
SCN8A-206ENST00000550891 KCNQ3O43525 872 aa19.38■□□□□ 0.69
SCN8A-206ENST00000550891 LMO7Q8WWI1 1683 aa19.37■□□□□ 0.69
SCN8A-206ENST00000550891 RGPD5Q99666 1765 aa19.37■□□□□ 0.69
SCN8A-206ENST00000550891 GNAI2P04899 355 aa19.37■□□□□ 0.69
SCN8A-206ENST00000550891 XIRP1Q702N8 1843 aaKnown RBP19.37■□□□□ 0.69
SCN8A-206ENST00000550891 CEP85Q6P2H3 762 aa19.36■□□□□ 0.69
SCN8A-206ENST00000550891 CHPF2Q9P2E5 772 aa19.36■□□□□ 0.69
SCN8A-206ENST00000550891 HSP90AB1P08238 724 aaKnown RBP19.36■□□□□ 0.69
SCN8A-206ENST00000550891 PHKG2P15735 406 aa19.35■□□□□ 0.69
SCN8A-206ENST00000550891 DBF4Q9UBU7 674 aaPredicted RBP19.35■□□□□ 0.69
SCN8A-206ENST00000550891 EVA1CP58658 441 aa19.35■□□□□ 0.69
SCN8A-206ENST00000550891 DCTPP1Q9H773 170 aa19.35■□□□□ 0.69
SCN8A-206ENST00000550891 PHAXQ9H814 394 aaKnown RBP19.35■□□□□ 0.69
SCN8A-206ENST00000550891 ABCC6O95255 1503 aa19.34■□□□□ 0.69
SCN8A-206ENST00000550891 CAMTA1Q9Y6Y1 1673 aa19.34■□□□□ 0.69
SCN8A-206ENST00000550891 TTC5Q8N0Z6 440 aa19.33■□□□□ 0.68
SCN8A-206ENST00000550891 APBB1O00213 710 aa19.33■□□□□ 0.68
SCN8A-206ENST00000550891 DCAF5Q96JK2 942 aa19.33■□□□□ 0.68
SCN8A-206ENST00000550891 SLC52A2Q9HAB3 445 aa19.33■□□□□ 0.68
SCN8A-206ENST00000550891 SRCIN1Q9C0H9 1055 aa19.32■□□□□ 0.68
SCN8A-206ENST00000550891 WDR17Q8IZU2 1322 aa19.32■□□□□ 0.68
SCN8A-206ENST00000550891 GIGYF1O75420 1035 aaPredicted RBP19.32■□□□□ 0.68
SCN8A-206ENST00000550891 UBTFL1P0CB47 393 aaPredicted RBP19.32■□□□□ 0.68
SCN8A-206ENST00000550891 STRN4Q9NRL3 753 aa19.32■□□□□ 0.68
SCN8A-206ENST00000550891 MEGF6O75095 1541 aa19.31■□□□□ 0.68
SCN8A-206ENST00000550891 FAM208AQ9UK61 1670 aaKnown RBP19.31■□□□□ 0.68
SCN8A-206ENST00000550891 NFATC2IPQ8NCF5 419 aa19.31■□□□□ 0.68
SCN8A-206ENST00000550891 CACNA1FO60840 1977 aa19.31■□□□□ 0.68
SCN8A-206ENST00000550891 SEC24BO95487 1268 aa19.31■□□□□ 0.68
SCN8A-206ENST00000550891 ATP10DQ9P241 1426 aa19.3■□□□□ 0.68
SCN8A-206ENST00000550891 ZNF790Q6PG37 636 aa19.3■□□□□ 0.68
SCN8A-206ENST00000550891 PLEKHG2Q9H7P9 1386 aa19.3■□□□□ 0.68
SCN8A-206ENST00000550891 DNAAF4Q8WXU2 420 aa19.3■□□□□ 0.68
SCN8A-206ENST00000550891 ANXA1P04083 346 aa19.29■□□□□ 0.68
SCN8A-206ENST00000550891 PI4KAP2A4QPH2 592 aa19.29■□□□□ 0.68
SCN8A-206ENST00000550891 CABP4P57796 275 aa19.29■□□□□ 0.68
SCN8A-206ENST00000550891 BMP2KLQ5H9B9 411 aa19.29■□□□□ 0.68
SCN8A-206ENST00000550891 PI4KAP1Q8N8J0 262 aa19.29■□□□□ 0.68
SCN8A-206ENST00000550891 MFAP1P55081 439 aaKnown RBP19.29■□□□□ 0.68
SCN8A-206ENST00000550891 SLC39A6Q13433 755 aa19.29■□□□□ 0.68
SCN8A-206ENST00000550891 COL18A1P39060 1754 aa19.28■□□□□ 0.68
SCN8A-206ENST00000550891 KDM3BQ7LBC6 1761 aa19.28■□□□□ 0.68
SCN8A-206ENST00000550891 DDX58O95786 925 aaKnown RBP19.28■□□□□ 0.68
SCN8A-206ENST00000550891 HYPKQ9NX55 129 aa19.28■□□□□ 0.68
SCN8A-206ENST00000550891 PXDNLA1KZ92 1463 aa19.28■□□□□ 0.68
SCN8A-206ENST00000550891 ZCRB1Q8TBF4 217 aaKnown RBP19.27■□□□□ 0.68
SCN8A-206ENST00000550891 CYP27B1O15528 508 aa19.27■□□□□ 0.68
SCN8A-206ENST00000550891 VIRMAQ69YN4 1812 aaKnown RBP19.26■□□□□ 0.67
SCN8A-206ENST00000550891 LRRFIP2Q9Y608 721 aaKnown RBP19.26■□□□□ 0.67
SCN8A-206ENST00000550891 BECN1Q14457 450 aa19.26■□□□□ 0.67
SCN8A-206ENST00000550891 PCDH11XQ9BZA7 1347 aa19.26■□□□□ 0.67
SCN8A-206ENST00000550891 PCDH11YQ9BZA8 1340 aa19.26■□□□□ 0.67
SCN8A-206ENST00000550891 KDM6AO15550 1401 aaPredicted RBP19.25■□□□□ 0.67
SCN8A-206ENST00000550891 IL2RBP14784 551 aa19.25■□□□□ 0.67
SCN8A-206ENST00000550891 CARD10Q9BWT7 1032 aa19.24■□□□□ 0.67
SCN8A-206ENST00000550891 USP44Q9H0E7 712 aa19.24■□□□□ 0.67
SCN8A-206ENST00000550891 HDAC5Q9UQL6 1122 aa19.24■□□□□ 0.67
SCN8A-206ENST00000550891 DDX21Q9NR30 783 aaKnown RBP eCLIP19.24■□□□□ 0.67
SCN8A-206ENST00000550891 AIMP1Q12904 312 aaKnown RBP19.24■□□□□ 0.67
SCN8A-206ENST00000550891 FMNL2Q96PY5 1086 aa19.24■□□□□ 0.67
SCN8A-206ENST00000550891 USP35Q9P2H5 1018 aa19.24■□□□□ 0.67
SCN8A-206ENST00000550891 CRYBG1Q9Y4K1 1723 aa19.23■□□□□ 0.67
SCN8A-206ENST00000550891 PRAMEF22A3QJZ6 481 aa19.23■□□□□ 0.67
SCN8A-206ENST00000550891 ATP8B2P98198 1209 aa19.23■□□□□ 0.67
SCN8A-206ENST00000550891 DDX54Q8TDD1 881 aaKnown RBP19.23■□□□□ 0.67
SCN8A-206ENST00000550891 TBC1D32Q96NH3 1257 aa19.23■□□□□ 0.67
SCN8A-206ENST00000550891 C9orf78Q9NZ63 289 aaPredicted RBP19.23■□□□□ 0.67
SCN8A-206ENST00000550891 MAP3K2Q9Y2U5 619 aa19.23■□□□□ 0.67
SCN8A-206ENST00000550891 COL5A2P05997 1499 aaPredicted RBP19.23■□□□□ 0.67
SCN8A-206ENST00000550891 EIF5BO60841 1220 aaKnown RBP19.22■□□□□ 0.67
SCN8A-206ENST00000550891 SNRPA1P09661 255 aaKnown RBP19.22■□□□□ 0.67
SCN8A-206ENST00000550891 KSR2Q6VAB6 950 aa19.22■□□□□ 0.67
SCN8A-206ENST00000550891 ZNF496Q96IT1 587 aaPredicted RBP19.22■□□□□ 0.67
SCN8A-206ENST00000550891 EXOC6BQ9Y2D4 811 aa19.22■□□□□ 0.67
SCN8A-206ENST00000550891 HEG1Q9ULI3 1381 aa19.22■□□□□ 0.67
SCN8A-206ENST00000550891 SMARCA5O60264 1052 aaPredicted RBP19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms