RNA–Protein interactions for RNA: ENST00000550846.5

PFDN5-211, Transcript of prefoldin subunit 5, humanhuman

TSL 2 BASIC

Gene PFDN5, Length 392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-211ENST00000550846 CEP350Q5VT06 3117 aa11.04□□□□□ -0.64
PFDN5-211ENST00000550846 MAP2P11137 1827 aaKnown RBP11.04□□□□□ -0.64
PFDN5-211ENST00000550846 ADCY9O60503 1353 aa11.03□□□□□ -0.64
PFDN5-211ENST00000550846 ZNF530Q6P9A1 599 aaPredicted RBP11.03□□□□□ -0.64
PFDN5-211ENST00000550846 SLC4A9Q96Q91 983 aa11.03□□□□□ -0.64
PFDN5-211ENST00000550846 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.03□□□□□ -0.64
PFDN5-211ENST00000550846 CICQ96RK0 1608 aaPredicted RBP11.02□□□□□ -0.64
PFDN5-211ENST00000550846 A0A0G2JLW4 131 aa11.02□□□□□ -0.65
PFDN5-211ENST00000550846 PTCD1O75127 700 aaKnown RBP11.02□□□□□ -0.65
PFDN5-211ENST00000550846 HSPA5P11021 654 aaKnown RBP11.02□□□□□ -0.65
PFDN5-211ENST00000550846 HMGB2P26583 209 aaKnown RBP11.02□□□□□ -0.65
PFDN5-211ENST00000550846 AEBP1Q8IUX7 1158 aa11.02□□□□□ -0.65
PFDN5-211ENST00000550846 PANK3Q9H999 370 aa11.02□□□□□ -0.65
PFDN5-211ENST00000550846 BCS1LQ9Y276 419 aa11.02□□□□□ -0.65
PFDN5-211ENST00000550846 RTCBQ9Y3I0 505 aaKnown RBP11.02□□□□□ -0.65
PFDN5-211ENST00000550846 KDRP35968 1356 aa11.02□□□□□ -0.65
PFDN5-211ENST00000550846 KDM6AO15550 1401 aaPredicted RBP11.01□□□□□ -0.65
PFDN5-211ENST00000550846 PXDNLA1KZ92 1463 aa11.01□□□□□ -0.65
PFDN5-211ENST00000550846 CABP4P57796 275 aa11.01□□□□□ -0.65
PFDN5-211ENST00000550846 TRAPPC3LQ5T215 181 aa11.01□□□□□ -0.65
PFDN5-211ENST00000550846 PLEKHO1Q53GL0 409 aaPredicted RBP11□□□□□ -0.65
PFDN5-211ENST00000550846 ARHGEF1Q92888 912 aaKnown RBP11□□□□□ -0.65
PFDN5-211ENST00000550846 DCAF5Q96JK2 942 aa11□□□□□ -0.65
PFDN5-211ENST00000550846 N4BP2Q86UW6 1770 aaPredicted RBP10.99□□□□□ -0.65
PFDN5-211ENST00000550846 RFC4P35249 363 aa10.99□□□□□ -0.65
PFDN5-211ENST00000550846 MORC1Q86VD1 984 aa10.99□□□□□ -0.65
PFDN5-211ENST00000550846 SRP68Q9UHB9 627 aaKnown RBP10.99□□□□□ -0.65
PFDN5-211ENST00000550846 ERVV-2B6SEH9 535 aa10.98□□□□□ -0.65
PFDN5-211ENST00000550846 GYS1P13807 737 aa10.98□□□□□ -0.65
PFDN5-211ENST00000550846 DPEP1P16444 411 aa10.98□□□□□ -0.65
PFDN5-211ENST00000550846 HSPA6P17066 643 aa10.98□□□□□ -0.65
PFDN5-211ENST00000550846 MTHFSP49914 203 aa10.98□□□□□ -0.65
PFDN5-211ENST00000550846 EIF4G2P78344 907 aaKnown RBP eCLIP10.98□□□□□ -0.65
PFDN5-211ENST00000550846 C1orf141Q5JVX7 400 aa10.98□□□□□ -0.65
PFDN5-211ENST00000550846 SULT6B1Q6IMI4 303 aa10.98□□□□□ -0.65
PFDN5-211ENST00000550846 ARHGAP27Q6ZUM4 889 aa10.98□□□□□ -0.65
PFDN5-211ENST00000550846 C10orf71Q711Q0 1435 aa10.98□□□□□ -0.65
PFDN5-211ENST00000550846 FCHSD2O94868 740 aa10.97□□□□□ -0.65
PFDN5-211ENST00000550846 HSP90AB1P08238 724 aaKnown RBP10.97□□□□□ -0.65
PFDN5-211ENST00000550846 CRKLP46109 303 aaKnown RBP10.97□□□□□ -0.65
PFDN5-211ENST00000550846 CNGB1Q14028 1251 aaPredicted RBP10.97□□□□□ -0.65
PFDN5-211ENST00000550846 NLGN1Q8N2Q7 840 aa10.97□□□□□ -0.65
PFDN5-211ENST00000550846 NFATC2IPQ8NCF5 419 aa10.97□□□□□ -0.65
PFDN5-211ENST00000550846 CCDC87Q9NVE4 849 aa10.97□□□□□ -0.65
PFDN5-211ENST00000550846 PARP3Q9Y6F1 533 aa10.97□□□□□ -0.65
PFDN5-211ENST00000550846 CNTNAP4Q9C0A0 1308 aa10.97□□□□□ -0.65
PFDN5-211ENST00000550846 C4AP0C0L4 1744 aa10.96□□□□□ -0.65
PFDN5-211ENST00000550846 COL5A3P25940 1745 aaPredicted RBP10.96□□□□□ -0.65
PFDN5-211ENST00000550846 KIAA1551Q9HCM1 1747 aa10.96□□□□□ -0.65
PFDN5-211ENST00000550846 KIF3CO14782 793 aa10.96□□□□□ -0.65
PFDN5-211ENST00000550846 RPS6KA4O75676 772 aa10.96□□□□□ -0.65
PFDN5-211ENST00000550846 TIMELESSQ9UNS1 1208 aa10.96□□□□□ -0.65
PFDN5-211ENST00000550846 TGFB2P61812 414 aa10.95□□□□□ -0.66
PFDN5-211ENST00000550846 FKBP8Q14318 412 aa10.95□□□□□ -0.66
PFDN5-211ENST00000550846 AMOTQ4VCS5 1084 aa10.95□□□□□ -0.66
PFDN5-211ENST00000550846 RC3H1Q5TC82 1133 aaKnown RBP10.95□□□□□ -0.66
PFDN5-211ENST00000550846 NMRK2Q9NPI5 230 aa10.95□□□□□ -0.66
PFDN5-211ENST00000550846 HMOX1P09601 288 aa10.94□□□□□ -0.66
PFDN5-211ENST00000550846 ADRA2BP18089 450 aa10.94□□□□□ -0.66
PFDN5-211ENST00000550846 CHRNA5P30532 468 aa10.94□□□□□ -0.66
PFDN5-211ENST00000550846 DDR1Q08345 913 aa10.94□□□□□ -0.66
PFDN5-211ENST00000550846 KNSTRNQ9Y448 316 aa10.94□□□□□ -0.66
PFDN5-211ENST00000550846 USP42Q9H9J4 1324 aaKnown RBP10.93□□□□□ -0.66
PFDN5-211ENST00000550846 SLC39A6Q13433 755 aa10.93□□□□□ -0.66
PFDN5-211ENST00000550846 IFFO2Q5TF58 517 aa10.93□□□□□ -0.66
PFDN5-211ENST00000550846 C9orf131Q5VYM1 1079 aa10.93□□□□□ -0.66
PFDN5-211ENST00000550846 DNAJC10Q8IXB1 793 aa10.93□□□□□ -0.66
PFDN5-211ENST00000550846 CCER1Q8TC90 406 aaPredicted RBP10.93□□□□□ -0.66
PFDN5-211ENST00000550846 LGR6Q9HBX8 967 aa10.93□□□□□ -0.66
PFDN5-211ENST00000550846 MYH14Q7Z406 1995 aaKnown RBP10.93□□□□□ -0.66
PFDN5-211ENST00000550846 KIF13BQ9NQT8 1826 aa10.93□□□□□ -0.66
PFDN5-211ENST00000550846 TJP1Q07157 1748 aa10.92□□□□□ -0.66
PFDN5-211ENST00000550846 KCNA3P22001 575 aa10.92□□□□□ -0.66
PFDN5-211ENST00000550846 IL13P35225 146 aa10.92□□□□□ -0.66
PFDN5-211ENST00000550846 PLEKHG2Q9H7P9 1386 aa10.91□□□□□ -0.66
PFDN5-211ENST00000550846 CLSPNQ9HAW4 1339 aa10.91□□□□□ -0.66
PFDN5-211ENST00000550846 HTRA3P83110 453 aa10.91□□□□□ -0.66
PFDN5-211ENST00000550846 DALRD3Q5D0E6 543 aaKnown RBP10.91□□□□□ -0.66
PFDN5-211ENST00000550846 USPL1Q5W0Q7 1092 aa10.91□□□□□ -0.66
PFDN5-211ENST00000550846 INTS5Q6P9B9 1019 aaKnown RBP10.91□□□□□ -0.66
PFDN5-211ENST00000550846 PIM2Q9P1W9 311 aa10.91□□□□□ -0.66
PFDN5-211ENST00000550846 ZNF831Q5JPB2 1677 aa10.91□□□□□ -0.66
PFDN5-211ENST00000550846 POLRMTO00411 1230 aaKnown RBP10.9□□□□□ -0.66
PFDN5-211ENST00000550846 ZPR1O75312 459 aa10.9□□□□□ -0.66
PFDN5-211ENST00000550846 SLC52A2Q9HAB3 445 aa10.9□□□□□ -0.66
PFDN5-211ENST00000550846 RNF181Q9P0P0 153 aa10.9□□□□□ -0.66
PFDN5-211ENST00000550846 KCPQ6ZWJ8 1503 aa10.89□□□□□ -0.67
PFDN5-211ENST00000550846 RNMTO43148 476 aaKnown RBP10.89□□□□□ -0.67
PFDN5-211ENST00000550846 TOMM70O94826 608 aa10.89□□□□□ -0.67
PFDN5-211ENST00000550846 RASSF7Q02833 373 aa10.89□□□□□ -0.67
PFDN5-211ENST00000550846 AKAP4Q5JQC9 854 aa10.89□□□□□ -0.67
PFDN5-211ENST00000550846 CC2D1BQ5T0F9 858 aaKnown RBP10.89□□□□□ -0.67
PFDN5-211ENST00000550846 BICDL1Q6ZP65 573 aa10.89□□□□□ -0.67
PFDN5-211ENST00000550846 C16orf71Q8IYS4 520 aaPredicted RBP10.89□□□□□ -0.67
PFDN5-211ENST00000550846 ZBTB1Q9Y2K1 713 aa10.89□□□□□ -0.67
PFDN5-211ENST00000550846 SOS1Q07889 1333 aaPredicted RBP10.88□□□□□ -0.67
PFDN5-211ENST00000550846 KIF7Q2M1P5 1343 aa10.88□□□□□ -0.67
PFDN5-211ENST00000550846 CANXP27824 592 aaKnown RBP10.88□□□□□ -0.67
PFDN5-211ENST00000550846 BRCA1P38398 1863 aaKnown RBP10.88□□□□□ -0.67
PFDN5-211ENST00000550846 APLP1P51693 650 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms