RNA–Protein interactions for RNA: ENST00000550584.6

PPFIA2-220, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 5,405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-220ENST00000550584 GBP7Q8N8V2 638 aaPredicted RBP10.2□□□□□ -0.78
PPFIA2-220ENST00000550584 IFT74Q96LB3 600 aa10.2□□□□□ -0.78
PPFIA2-220ENST00000550584 CCDC88BA6NC98 1476 aa10.2□□□□□ -0.78
PPFIA2-220ENST00000550584 CPLX1O14810 134 aa10.2□□□□□ -0.78
PPFIA2-220ENST00000550584 LACTBP83111 547 aaPredicted RBP10.2□□□□□ -0.78
PPFIA2-220ENST00000550584 VPS18Q9P253 973 aa10.2□□□□□ -0.78
PPFIA2-220ENST00000550584 USH1CQ9Y6N9 552 aa10.2□□□□□ -0.78
PPFIA2-220ENST00000550584 DZIP1Q86YF9 867 aaKnown RBP10.2□□□□□ -0.78
PPFIA2-220ENST00000550584 CTAGE15A4D2H0 777 aa10.2□□□□□ -0.78
PPFIA2-220ENST00000550584 CTAGE8P0CG41 777 aa10.2□□□□□ -0.78
PPFIA2-220ENST00000550584 SEPT7Q16181 437 aaKnown RBP10.2□□□□□ -0.78
PPFIA2-220ENST00000550584 CTAGE6Q86UF2 777 aa10.2□□□□□ -0.78
PPFIA2-220ENST00000550584 CTAGE4Q8IX94 777 aa10.2□□□□□ -0.78
PPFIA2-220ENST00000550584 TOP1P11387 765 aaKnown RBP10.2□□□□□ -0.78
PPFIA2-220ENST00000550584 GBP1P32455 592 aa10.2□□□□□ -0.78
PPFIA2-220ENST00000550584 NBPF6Q5VWK0 638 aa10.2□□□□□ -0.78
PPFIA2-220ENST00000550584 NBPF5PQ86XG9 351 aaPredicted RBP10.2□□□□□ -0.78
PPFIA2-220ENST00000550584 NBPF4Q96M43 638 aa10.2□□□□□ -0.78
PPFIA2-220ENST00000550584 SH3GL3Q99963 347 aa10.2□□□□□ -0.78
PPFIA2-220ENST00000550584 BCL2L12Q9HB09 334 aa10.2□□□□□ -0.78
PPFIA2-220ENST00000550584 A0A087WUV0 522 aaPredicted RBP10.19□□□□□ -0.78
PPFIA2-220ENST00000550584 APAF1O14727 1248 aa10.19□□□□□ -0.78
PPFIA2-220ENST00000550584 RIOK3O14730 519 aaKnown RBP10.19□□□□□ -0.78
PPFIA2-220ENST00000550584 CASTP20810 708 aaKnown RBP10.19□□□□□ -0.78
PPFIA2-220ENST00000550584 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.19□□□□□ -0.78
PPFIA2-220ENST00000550584 PANK1Q8TE04 598 aa10.19□□□□□ -0.78
PPFIA2-220ENST00000550584 ERICH3Q5RHP9 1530 aa10.19□□□□□ -0.78
PPFIA2-220ENST00000550584 NLRP5P59047 1200 aa10.19□□□□□ -0.78
PPFIA2-220ENST00000550584 DHX37Q8IY37 1157 aaKnown RBP10.19□□□□□ -0.78
PPFIA2-220ENST00000550584 DDX12PQ92771 950 aa10.19□□□□□ -0.78
PPFIA2-220ENST00000550584 DTNBP1Q96EV8 351 aa10.19□□□□□ -0.78
PPFIA2-220ENST00000550584 KDM4AO75164 1064 aa10.19□□□□□ -0.78
PPFIA2-220ENST00000550584 PAFAH1B1P43034 410 aa10.19□□□□□ -0.78
PPFIA2-220ENST00000550584 TSNAXIP1Q2TAA8 658 aa10.19□□□□□ -0.78
PPFIA2-220ENST00000550584 ZNF365Q70YC5 407 aa10.19□□□□□ -0.78
PPFIA2-220ENST00000550584 CYP46A1Q9Y6A2 500 aa10.19□□□□□ -0.78
PPFIA2-220ENST00000550584 FEZ2Q9UHY8 353 aaPredicted RBP10.19□□□□□ -0.78
PPFIA2-220ENST00000550584 RBM26Q5T8P6 1007 aaKnown RBP10.18□□□□□ -0.78
PPFIA2-220ENST00000550584 CACNA2D4Q7Z3S7 1137 aa10.18□□□□□ -0.78
PPFIA2-220ENST00000550584 TAF4BQ92750 862 aa10.18□□□□□ -0.78
PPFIA2-220ENST00000550584 STK38Q15208 465 aa10.18□□□□□ -0.78
PPFIA2-220ENST00000550584 WWC2Q6AWC2 1192 aa10.18□□□□□ -0.78
PPFIA2-220ENST00000550584 NBPF3Q9H094 633 aa10.18□□□□□ -0.78
PPFIA2-220ENST00000550584 ZMAT2Q96NC0 199 aaKnown RBP10.18□□□□□ -0.78
PPFIA2-220ENST00000550584 LRPPRCP42704 1394 aaKnown RBP10.18□□□□□ -0.78
PPFIA2-220ENST00000550584 BUB1BO60566 1050 aaPredicted RBP10.17□□□□□ -0.78
PPFIA2-220ENST00000550584 MAGEA9P43362 315 aa10.17□□□□□ -0.78
PPFIA2-220ENST00000550584 ATP11AP98196 1134 aa10.17□□□□□ -0.78
PPFIA2-220ENST00000550584 BRD3Q15059 726 aa10.17□□□□□ -0.78
PPFIA2-220ENST00000550584 C8orf34Q49A92 452 aa10.17□□□□□ -0.78
PPFIA2-220ENST00000550584 MMS22LQ6ZRQ5 1243 aa10.17□□□□□ -0.78
PPFIA2-220ENST00000550584 TTC14Q96N46 770 aa10.17□□□□□ -0.78
PPFIA2-220ENST00000550584 PPP1R12BO60237 982 aaPredicted RBP10.17□□□□□ -0.78
PPFIA2-220ENST00000550584 STIM1Q13586 685 aa10.17□□□□□ -0.78
PPFIA2-220ENST00000550584 KIF21BO75037 1637 aa10.17□□□□□ -0.78
PPFIA2-220ENST00000550584 PPFIBP2Q8ND30 876 aa10.17□□□□□ -0.78
PPFIA2-220ENST00000550584 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.17□□□□□ -0.78
PPFIA2-220ENST00000550584 NKTRP30414 1462 aaKnown RBP10.17□□□□□ -0.78
PPFIA2-220ENST00000550584 SKILP12757 684 aa10.17□□□□□ -0.78
PPFIA2-220ENST00000550584 MAP7Q14244 749 aa10.17□□□□□ -0.78
PPFIA2-220ENST00000550584 PDCD2Q16342 344 aaPredicted RBP10.17□□□□□ -0.78
PPFIA2-220ENST00000550584 RRP15Q9Y3B9 282 aaKnown RBP10.17□□□□□ -0.78
PPFIA2-220ENST00000550584 HDAC1Q13547 482 aaPredicted RBP10.16□□□□□ -0.78
PPFIA2-220ENST00000550584 CCDC27Q2M243 656 aa10.16□□□□□ -0.78
PPFIA2-220ENST00000550584 HSP90AB2PQ58FF8 381 aa10.16□□□□□ -0.78
PPFIA2-220ENST00000550584 CACNA2D3Q8IZS8 1091 aa10.16□□□□□ -0.78
PPFIA2-220ENST00000550584 TACC1O75410 805 aa10.16□□□□□ -0.78
PPFIA2-220ENST00000550584 GNAI1P63096 354 aa10.16□□□□□ -0.78
PPFIA2-220ENST00000550584 LRRC23Q53EV4 343 aaPredicted RBP10.16□□□□□ -0.78
PPFIA2-220ENST00000550584 SCLT1Q96NL6 688 aa10.16□□□□□ -0.78
PPFIA2-220ENST00000550584 LARP1BQ659C4 914 aaKnown RBP10.16□□□□□ -0.78
PPFIA2-220ENST00000550584 USO1O60763 962 aaKnown RBP10.16□□□□□ -0.78
PPFIA2-220ENST00000550584 SLC20A2Q08357 652 aa10.16□□□□□ -0.78
PPFIA2-220ENST00000550584 AIMP1Q12904 312 aaKnown RBP10.16□□□□□ -0.78
PPFIA2-220ENST00000550584 XBP1P17861 261 aa10.16□□□□□ -0.78
PPFIA2-220ENST00000550584 CCDC129Q6ZRS4 1044 aa10.16□□□□□ -0.78
PPFIA2-220ENST00000550584 CCDC6Q16204 474 aa10.15□□□□□ -0.78
PPFIA2-220ENST00000550584 ST20-MTHFSA0A0A6YYL1 179 aa10.15□□□□□ -0.78
PPFIA2-220ENST00000550584 DYNC1I2Q13409 638 aaKnown RBP10.15□□□□□ -0.78
PPFIA2-220ENST00000550584 CFAP100Q494V2 611 aa10.15□□□□□ -0.78
PPFIA2-220ENST00000550584 CCDC92Q53HC0 331 aaPredicted RBP10.15□□□□□ -0.78
PPFIA2-220ENST00000550584 BMP2KLQ5H9B9 411 aa10.15□□□□□ -0.78
PPFIA2-220ENST00000550584 TRIM7Q9C029 511 aa10.15□□□□□ -0.78
PPFIA2-220ENST00000550584 LARSQ9P2J5 1176 aaKnown RBP10.15□□□□□ -0.78
PPFIA2-220ENST00000550584 WDR97A6NE52 1622 aa10.15□□□□□ -0.78
PPFIA2-220ENST00000550584 SRGAP3O43295 1099 aa10.15□□□□□ -0.78
PPFIA2-220ENST00000550584 NBPF7P0C2Y1 421 aaPredicted RBP10.15□□□□□ -0.78
PPFIA2-220ENST00000550584 PPP2R5AQ15172 486 aa10.15□□□□□ -0.78
PPFIA2-220ENST00000550584 EXOC4Q96A65 974 aa10.15□□□□□ -0.78
PPFIA2-220ENST00000550584 VCX3BQ9H321 246 aa10.15□□□□□ -0.78
PPFIA2-220ENST00000550584 VCX3AQ9NNX9 186 aa10.15□□□□□ -0.78
PPFIA2-220ENST00000550584 CEP104O60308 925 aa10.15□□□□□ -0.79
PPFIA2-220ENST00000550584 KRT32Q14532 448 aa10.15□□□□□ -0.79
PPFIA2-220ENST00000550584 CCDC174Q6PII3 467 aa10.15□□□□□ -0.79
PPFIA2-220ENST00000550584 RMDN2Q96LZ7 410 aa10.15□□□□□ -0.79
PPFIA2-220ENST00000550584 FAM210AQ96ND0 272 aa10.15□□□□□ -0.79
PPFIA2-220ENST00000550584 ALS2CR12Q96Q35 445 aa10.15□□□□□ -0.79
PPFIA2-220ENST00000550584 ZBTB12Q9Y330 459 aaPredicted RBP10.15□□□□□ -0.79
PPFIA2-220ENST00000550584 CROCCP2Q86T23 111 aa10.14□□□□□ -0.79
PPFIA2-220ENST00000550584 MED4Q9NPJ6 270 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms