RNA–Protein interactions for RNA: ENST00000550536.5

RAB3IP-212, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 9,646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-212ENST00000550536 NUTM2AQ8IVF1 878 aaPredicted RBP14.64□□□□□ -0.07
RAB3IP-212ENST00000550536 EPB41L2O43491 1005 aaKnown RBP14.64□□□□□ -0.07
RAB3IP-212ENST00000550536 RAB11FIP3O75154 756 aa14.64□□□□□ -0.07
RAB3IP-212ENST00000550536 CIZ1Q9ULV3 898 aaPredicted RBP14.63□□□□□ -0.07
RAB3IP-212ENST00000550536 EIF5P55010 431 aaKnown RBP14.62□□□□□ -0.07
RAB3IP-212ENST00000550536 TAX1BP1Q86VP1 789 aa14.62□□□□□ -0.07
RAB3IP-212ENST00000550536 MAP3K11Q16584 847 aa14.62□□□□□ -0.07
RAB3IP-212ENST00000550536 BACH2Q9BYV9 841 aa14.62□□□□□ -0.07
RAB3IP-212ENST00000550536 IDH1O75874 414 aaKnown RBP14.62□□□□□ -0.07
RAB3IP-212ENST00000550536 NEBLO76041 1014 aa14.62□□□□□ -0.07
RAB3IP-212ENST00000550536 CCDC148Q8NFR7 591 aa14.62□□□□□ -0.07
RAB3IP-212ENST00000550536 MAGI1Q96QZ7 1491 aaPredicted RBP14.61□□□□□ -0.07
RAB3IP-212ENST00000550536 TMOD2Q9NZR1 351 aa14.61□□□□□ -0.07
RAB3IP-212ENST00000550536 ZPR1O75312 459 aa14.61□□□□□ -0.07
RAB3IP-212ENST00000550536 NFE2L2Q16236 605 aa14.61□□□□□ -0.07
RAB3IP-212ENST00000550536 FAM193AP78312 1265 aa14.61□□□□□ -0.07
RAB3IP-212ENST00000550536 USP5P45974 858 aa14.61□□□□□ -0.07
RAB3IP-212ENST00000550536 KCNH5Q8NCM2 988 aa14.61□□□□□ -0.07
RAB3IP-212ENST00000550536 ANKIB1Q9P2G1 1089 aa14.61□□□□□ -0.07
RAB3IP-212ENST00000550536 CAVIN4Q5BKX8 364 aa14.6□□□□□ -0.07
RAB3IP-212ENST00000550536 METTL24Q5JXM2 366 aa14.6□□□□□ -0.07
RAB3IP-212ENST00000550536 BIVM-ERCC5R4GMW8 1640 aa14.6□□□□□ -0.07
RAB3IP-212ENST00000550536 KIF1BPQ96EK5 621 aa14.6□□□□□ -0.07
RAB3IP-212ENST00000550536 INCENPQ9NQS7 918 aa14.6□□□□□ -0.07
RAB3IP-212ENST00000550536 CCDC196A0A1B0GTZ2 297 aa14.6□□□□□ -0.07
RAB3IP-212ENST00000550536 ARHGAP29Q52LW3 1261 aa14.6□□□□□ -0.07
RAB3IP-212ENST00000550536 UQCRHLA0A096LP55 91 aa14.6□□□□□ -0.07
RAB3IP-212ENST00000550536 UQCRHP07919 91 aa14.6□□□□□ -0.07
RAB3IP-212ENST00000550536 PPP4R3AQ6IN85 833 aa14.59□□□□□ -0.07
RAB3IP-212ENST00000550536 SSR1P43307 286 aaKnown RBP14.59□□□□□ -0.07
RAB3IP-212ENST00000550536 TAF4BQ92750 862 aa14.59□□□□□ -0.07
RAB3IP-212ENST00000550536 PLCD4Q9BRC7 762 aa14.59□□□□□ -0.07
RAB3IP-212ENST00000550536 PIBF1Q8WXW3 757 aa14.59□□□□□ -0.07
RAB3IP-212ENST00000550536 CFAP100Q494V2 611 aa14.59□□□□□ -0.07
RAB3IP-212ENST00000550536 PHAXQ9H814 394 aaKnown RBP14.59□□□□□ -0.07
RAB3IP-212ENST00000550536 RAPGEF6Q8TEU7 1601 aa14.58□□□□□ -0.07
RAB3IP-212ENST00000550536 TMPOP42166 694 aaKnown RBP14.58□□□□□ -0.08
RAB3IP-212ENST00000550536 VPS36Q86VN1 386 aa14.58□□□□□ -0.08
RAB3IP-212ENST00000550536 CCDC150Q8NCX0 1101 aa14.58□□□□□ -0.08
RAB3IP-212ENST00000550536 ABCF2Q9UG63 623 aa14.58□□□□□ -0.08
RAB3IP-212ENST00000550536 CETN2P41208 172 aa14.58□□□□□ -0.08
RAB3IP-212ENST00000550536 FGFR1OPO95684 399 aaKnown RBP14.58□□□□□ -0.08
RAB3IP-212ENST00000550536 TMOD3Q9NYL9 352 aa14.58□□□□□ -0.08
RAB3IP-212ENST00000550536 TSG101Q99816 390 aa14.58□□□□□ -0.08
RAB3IP-212ENST00000550536 BRPF3Q9ULD4 1205 aa14.58□□□□□ -0.08
RAB3IP-212ENST00000550536 SPA17Q15506 151 aa14.57□□□□□ -0.08
RAB3IP-212ENST00000550536 MX1P20591 662 aa14.57□□□□□ -0.08
RAB3IP-212ENST00000550536 CCDC91Q7Z6B0 441 aa14.57□□□□□ -0.08
RAB3IP-212ENST00000550536 TMEM57Q8N5G2 664 aa14.57□□□□□ -0.08
RAB3IP-212ENST00000550536 KIF2AO00139 706 aaPredicted RBP14.57□□□□□ -0.08
RAB3IP-212ENST00000550536 MAP9Q49MG5 647 aa14.57□□□□□ -0.08
RAB3IP-212ENST00000550536 SLC26A8Q96RN1 970 aa14.57□□□□□ -0.08
RAB3IP-212ENST00000550536 GLRX3O76003 335 aaKnown RBP14.57□□□□□ -0.08
RAB3IP-212ENST00000550536 HMGB1P09429 215 aaKnown RBP14.57□□□□□ -0.08
RAB3IP-212ENST00000550536 HSP90AB3PQ58FF7 597 aa14.57□□□□□ -0.08
RAB3IP-212ENST00000550536 RAB34Q9BZG1 259 aa14.57□□□□□ -0.08
RAB3IP-212ENST00000550536 LARP1Q6PKG0 1096 aaKnown RBP14.57□□□□□ -0.08
RAB3IP-212ENST00000550536 ABCC11Q96J66 1382 aa14.57□□□□□ -0.08
RAB3IP-212ENST00000550536 MCM3P25205 808 aa14.56□□□□□ -0.08
RAB3IP-212ENST00000550536 NAPBQ9H115 298 aa14.56□□□□□ -0.08
RAB3IP-212ENST00000550536 SYCE3A1L190 88 aa14.56□□□□□ -0.08
RAB3IP-212ENST00000550536 RBM10P98175 930 aaKnown RBP14.56□□□□□ -0.08
RAB3IP-212ENST00000550536 DZIP1Q86YF9 867 aaKnown RBP14.56□□□□□ -0.08
RAB3IP-212ENST00000550536 RPAP2Q8IXW5 612 aaPredicted RBP14.56□□□□□ -0.08
RAB3IP-212ENST00000550536 KIF1BO60333 1816 aa14.56□□□□□ -0.08
RAB3IP-212ENST00000550536 ADGBQ8N7X0 1667 aa14.56□□□□□ -0.08
RAB3IP-212ENST00000550536 FKBP15Q5T1M5 1219 aa14.56□□□□□ -0.08
RAB3IP-212ENST00000550536 BICDL1Q6ZP65 573 aa14.56□□□□□ -0.08
RAB3IP-212ENST00000550536 SH2B1Q9NRF2 756 aaPredicted RBP14.56□□□□□ -0.08
RAB3IP-212ENST00000550536 PIP4K2BP78356 416 aa14.56□□□□□ -0.08
RAB3IP-212ENST00000550536 CCDC102AQ96A19 550 aa14.56□□□□□ -0.08
RAB3IP-212ENST00000550536 ANAPC15P60006 121 aa14.55□□□□□ -0.08
RAB3IP-212ENST00000550536 CAMK4Q16566 473 aa14.55□□□□□ -0.08
RAB3IP-212ENST00000550536 DDX11Q96FC9 970 aa14.55□□□□□ -0.08
RAB3IP-212ENST00000550536 MKNK2Q9HBH9 465 aa14.55□□□□□ -0.08
RAB3IP-212ENST00000550536 ADGRL1O94910 1474 aa14.55□□□□□ -0.08
RAB3IP-212ENST00000550536 POLR3DP05423 398 aaPredicted RBP14.55□□□□□ -0.08
RAB3IP-212ENST00000550536 SFPQP23246 707 aaKnown RBP eCLIP14.55□□□□□ -0.08
RAB3IP-212ENST00000550536 ALDH1L2Q3SY69 923 aa14.55□□□□□ -0.08
RAB3IP-212ENST00000550536 CRACR2BQ8N4Y2 399 aaPredicted RBP14.55□□□□□ -0.08
RAB3IP-212ENST00000550536 IL1RAPL2Q9NP60 686 aa14.55□□□□□ -0.08
RAB3IP-212ENST00000550536 CFAP43Q8NDM7 1665 aa14.55□□□□□ -0.08
RAB3IP-212ENST00000550536 AMOTQ4VCS5 1084 aa14.55□□□□□ -0.08
RAB3IP-212ENST00000550536 CCDC183Q5T5S1 534 aa14.55□□□□□ -0.08
RAB3IP-212ENST00000550536 DUSP27Q5VZP5 1158 aa14.55□□□□□ -0.08
RAB3IP-212ENST00000550536 CASQ1P31415 396 aa14.54□□□□□ -0.08
RAB3IP-212ENST00000550536 SLF2Q8IX21 1173 aa14.54□□□□□ -0.08
RAB3IP-212ENST00000550536 CCDC85AQ96PX6 553 aaPredicted RBP14.54□□□□□ -0.08
RAB3IP-212ENST00000550536 ZSCAN12O43309 604 aa14.54□□□□□ -0.08
RAB3IP-212ENST00000550536 IFIT5Q13325 482 aaKnown RBP14.54□□□□□ -0.08
RAB3IP-212ENST00000550536 NUDT16Q96DE0 195 aaKnown RBP14.54□□□□□ -0.08
RAB3IP-212ENST00000550536 USP8P40818 1118 aa14.54□□□□□ -0.08
RAB3IP-212ENST00000550536 EXOC6BQ9Y2D4 811 aa14.54□□□□□ -0.08
RAB3IP-212ENST00000550536 CCDC61Q9Y6R9 512 aa14.54□□□□□ -0.08
RAB3IP-212ENST00000550536 KIF5CO60282 957 aa14.54□□□□□ -0.08
RAB3IP-212ENST00000550536 TMEM266Q2M3C6 531 aa14.54□□□□□ -0.08
RAB3IP-212ENST00000550536 NUTM1Q86Y26 1132 aa14.54□□□□□ -0.08
RAB3IP-212ENST00000550536 SCAND2PQ9GZW5 306 aaPredicted RBP14.54□□□□□ -0.08
RAB3IP-212ENST00000550536 MINDY4BA8MYZ0 360 aa14.54□□□□□ -0.08
RAB3IP-212ENST00000550536 HYPKQ9NX55 129 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms