RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 ERVV-2B6SEH9 535 aa29.77■■■□□ 2.36
SMARCC2-210ENST00000550519 GNPATO15228 680 aa29.76■■■□□ 2.35
SMARCC2-210ENST00000550519 HSP90AB1P08238 724 aaKnown RBP29.75■■■□□ 2.35
SMARCC2-210ENST00000550519 PLEKHO1Q53GL0 409 aaPredicted RBP29.75■■■□□ 2.35
SMARCC2-210ENST00000550519 DCAF5Q96JK2 942 aa29.75■■■□□ 2.35
SMARCC2-210ENST00000550519 MORC1Q86VD1 984 aa29.74■■■□□ 2.35
SMARCC2-210ENST00000550519 KDRP35968 1356 aa29.74■■■□□ 2.35
SMARCC2-210ENST00000550519 AMOTQ4VCS5 1084 aa29.72■■■□□ 2.35
SMARCC2-210ENST00000550519 CCER1Q8TC90 406 aaPredicted RBP29.72■■■□□ 2.35
SMARCC2-210ENST00000550519 SLC4A9Q96Q91 983 aa29.72■■■□□ 2.35
SMARCC2-210ENST00000550519 GIGYF1O75420 1035 aaPredicted RBP29.7■■■□□ 2.35
SMARCC2-210ENST00000550519 ZNF530Q6P9A1 599 aaPredicted RBP29.7■■■□□ 2.35
SMARCC2-210ENST00000550519 KDM6AO15550 1401 aaPredicted RBP29.7■■■□□ 2.34
SMARCC2-210ENST00000550519 AEBP1Q8IUX7 1158 aa29.69■■■□□ 2.34
SMARCC2-210ENST00000550519 KNSTRNQ9Y448 316 aa29.68■■■□□ 2.34
SMARCC2-210ENST00000550519 SENP3-EIF4A1A0A087X0R7 540 aa29.67■■■□□ 2.34
SMARCC2-210ENST00000550519 RBM42Q9BTD8 480 aaKnown RBP29.67■■■□□ 2.34
SMARCC2-210ENST00000550519 RTCBQ9Y3I0 505 aaKnown RBP29.67■■■□□ 2.34
SMARCC2-210ENST00000550519 RC3H1Q5TC82 1133 aaKnown RBP29.66■■■□□ 2.34
SMARCC2-210ENST00000550519 CABP4P57796 275 aa29.65■■■□□ 2.34
SMARCC2-210ENST00000550519 TRAPPC3LQ5T215 181 aa29.65■■■□□ 2.34
SMARCC2-210ENST00000550519 ZNF831Q5JPB2 1677 aa29.65■■■□□ 2.34
SMARCC2-210ENST00000550519 MMP10P09238 476 aa29.64■■■□□ 2.34
SMARCC2-210ENST00000550519 MTHFSP49914 203 aa29.64■■■□□ 2.34
SMARCC2-210ENST00000550519 IL13P35225 146 aa29.63■■■□□ 2.33
SMARCC2-210ENST00000550519 SULT6B1Q6IMI4 303 aa29.63■■■□□ 2.33
SMARCC2-210ENST00000550519 CNTNAP4Q9C0A0 1308 aa29.63■■■□□ 2.33
SMARCC2-210ENST00000550519 ADRA2BP18089 450 aa29.62■■■□□ 2.33
SMARCC2-210ENST00000550519 AMER1Q5JTC6 1135 aaPredicted RBP29.62■■■□□ 2.33
SMARCC2-210ENST00000550519 C1orf141Q5JVX7 400 aa29.62■■■□□ 2.33
SMARCC2-210ENST00000550519 ATP10DQ9P241 1426 aa29.62■■■□□ 2.33
SMARCC2-210ENST00000550519 NLGN1Q8N2Q7 840 aa29.61■■■□□ 2.33
SMARCC2-210ENST00000550519 ARHGEF1Q92888 912 aaKnown RBP29.61■■■□□ 2.33
SMARCC2-210ENST00000550519 RPS6KA4O75676 772 aa29.6■■■□□ 2.33
SMARCC2-210ENST00000550519 WWC3Q9ULE0 1092 aa29.59■■■□□ 2.33
SMARCC2-210ENST00000550519 ADCY9O60503 1353 aa29.59■■■□□ 2.33
SMARCC2-210ENST00000550519 NFATC2IPQ8NCF5 419 aa29.58■■■□□ 2.33
SMARCC2-210ENST00000550519 COL5A3P25940 1745 aaPredicted RBP29.57■■■□□ 2.32
SMARCC2-210ENST00000550519 KIF7Q2M1P5 1343 aa29.56■■■□□ 2.32
SMARCC2-210ENST00000550519 PTCD1O75127 700 aaKnown RBP29.56■■■□□ 2.32
SMARCC2-210ENST00000550519 GYS1P13807 737 aa29.56■■■□□ 2.32
SMARCC2-210ENST00000550519 RFC4P35249 363 aa29.55■■■□□ 2.32
SMARCC2-210ENST00000550519 TGFB2P61812 414 aa29.54■■■□□ 2.32
SMARCC2-210ENST00000550519 PXDNLA1KZ92 1463 aa29.54■■■□□ 2.32
SMARCC2-210ENST00000550519 CRKLP46109 303 aaKnown RBP29.52■■■□□ 2.32
SMARCC2-210ENST00000550519 AKAP4Q5JQC9 854 aa29.52■■■□□ 2.32
SMARCC2-210ENST00000550519 GPBP1L1Q9HC44 474 aaPredicted RBP29.52■■■□□ 2.32
SMARCC2-210ENST00000550519 C10orf71Q711Q0 1435 aa29.52■■■□□ 2.32
SMARCC2-210ENST00000550519 CICQ96RK0 1608 aaPredicted RBP29.52■■■□□ 2.32
SMARCC2-210ENST00000550519 PER1O15534 1290 aaPredicted RBP29.51■■■□□ 2.31
SMARCC2-210ENST00000550519 MYH14Q7Z406 1995 aaKnown RBP29.51■■■□□ 2.31
SMARCC2-210ENST00000550519 KIF13BQ9NQT8 1826 aa29.5■■■□□ 2.31
SMARCC2-210ENST00000550519 CCDC87Q9NVE4 849 aa29.49■■■□□ 2.31
SMARCC2-210ENST00000550519 A0A0G2JLW4 131 aa29.48■■■□□ 2.31
SMARCC2-210ENST00000550519 PARP3Q9Y6F1 533 aa29.48■■■□□ 2.31
SMARCC2-210ENST00000550519 SLC52A2Q9HAB3 445 aa29.47■■■□□ 2.31
SMARCC2-210ENST00000550519 KIAA1551Q9HCM1 1747 aa29.47■■■□□ 2.31
SMARCC2-210ENST00000550519 LGR6Q9HBX8 967 aa29.46■■■□□ 2.31
SMARCC2-210ENST00000550519 C4AP0C0L4 1744 aa29.45■■■□□ 2.31
SMARCC2-210ENST00000550519 SCN11AQ9UI33 1791 aa29.45■■■□□ 2.31
SMARCC2-210ENST00000550519 HMOX1P09601 288 aa29.45■■■□□ 2.31
SMARCC2-210ENST00000550519 ZNF526Q8TF50 670 aaPredicted RBP29.45■■■□□ 2.31
SMARCC2-210ENST00000550519 INTS5Q6P9B9 1019 aaKnown RBP29.44■■■□□ 2.3
SMARCC2-210ENST00000550519 SRP68Q9UHB9 627 aaKnown RBP29.44■■■□□ 2.3
SMARCC2-210ENST00000550519 BCS1LQ9Y276 419 aa29.44■■■□□ 2.3
SMARCC2-210ENST00000550519 USP42Q9H9J4 1324 aaKnown RBP29.44■■■□□ 2.3
SMARCC2-210ENST00000550519 RNMTO43148 476 aaKnown RBP29.43■■■□□ 2.3
SMARCC2-210ENST00000550519 DPEP1P16444 411 aa29.43■■■□□ 2.3
SMARCC2-210ENST00000550519 TJP1Q07157 1748 aa29.42■■■□□ 2.3
SMARCC2-210ENST00000550519 FKBP8Q14318 412 aa29.42■■■□□ 2.3
SMARCC2-210ENST00000550519 DIAPH1O60610 1272 aaKnown RBP29.41■■■□□ 2.3
SMARCC2-210ENST00000550519 CC2D1BQ5T0F9 858 aaKnown RBP29.41■■■□□ 2.3
SMARCC2-210ENST00000550519 DNAJC10Q8IXB1 793 aa29.41■■■□□ 2.3
SMARCC2-210ENST00000550519 N4BP2Q86UW6 1770 aaPredicted RBP29.41■■■□□ 2.3
SMARCC2-210ENST00000550519 MRC1P22897 1456 aa29.41■■■□□ 2.3
SMARCC2-210ENST00000550519 KCNA3P22001 575 aa29.4■■■□□ 2.3
SMARCC2-210ENST00000550519 MTHFSDQ2M296 383 aaKnown RBP29.4■■■□□ 2.3
SMARCC2-210ENST00000550519 CEP350Q5VT06 3117 aa29.39■■■□□ 2.3
SMARCC2-210ENST00000550519 DDR1Q08345 913 aa29.39■■■□□ 2.3
SMARCC2-210ENST00000550519 SLC39A6Q13433 755 aa29.38■■■□□ 2.29
SMARCC2-210ENST00000550519 FCHSD2O94868 740 aa29.37■■■□□ 2.29
SMARCC2-210ENST00000550519 CYP19A1P11511 503 aaPredicted RBP29.36■■■□□ 2.29
SMARCC2-210ENST00000550519 SOS1Q07889 1333 aaPredicted RBP29.36■■■□□ 2.29
SMARCC2-210ENST00000550519 NPC1L1Q9UHC9 1359 aa29.36■■■□□ 2.29
SMARCC2-210ENST00000550519 ADAMTS7Q9UKP4 1686 aa29.35■■■□□ 2.29
SMARCC2-210ENST00000550519 KIF3CO14782 793 aa29.35■■■□□ 2.29
SMARCC2-210ENST00000550519 TM4SF1P30408 202 aa29.35■■■□□ 2.29
SMARCC2-210ENST00000550519 ARHGAP27Q6ZUM4 889 aa29.35■■■□□ 2.29
SMARCC2-210ENST00000550519 POLRMTO00411 1230 aaKnown RBP29.33■■■□□ 2.29
SMARCC2-210ENST00000550519 PIM2Q9P1W9 311 aa29.33■■■□□ 2.29
SMARCC2-210ENST00000550519 KCPQ6ZWJ8 1503 aa29.33■■■□□ 2.29
SMARCC2-210ENST00000550519 ZPR1O75312 459 aa29.32■■■□□ 2.28
SMARCC2-210ENST00000550519 USPL1Q5W0Q7 1092 aa29.32■■■□□ 2.28
SMARCC2-210ENST00000550519 VSIG10Q8N0Z9 540 aa29.32■■■□□ 2.28
SMARCC2-210ENST00000550519 BRCA1P38398 1863 aaKnown RBP29.31■■■□□ 2.28
SMARCC2-210ENST00000550519 HSPA6P17066 643 aa29.31■■■□□ 2.28
SMARCC2-210ENST00000550519 COL3A1P02461 1466 aaPredicted RBP29.3■■■□□ 2.28
SMARCC2-210ENST00000550519 ZBTB1Q9Y2K1 713 aa29.3■■■□□ 2.28
SMARCC2-210ENST00000550519 NARFQ9UHQ1 456 aa29.29■■■□□ 2.28
SMARCC2-210ENST00000550519 DALRD3Q5D0E6 543 aaKnown RBP29.28■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms