RNA–Protein interactions for RNA: ENST00000550442.5

LETMD1-223, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-223ENST00000550442 HSPA6P17066 643 aa15□□□□□ -0.01
LETMD1-223ENST00000550442 PRKAR2BP31323 418 aa15□□□□□ -0.01
LETMD1-223ENST00000550442 HDAC1Q13547 482 aaPredicted RBP15□□□□□ -0.01
LETMD1-223ENST00000550442 CFAP44Q96MT7 982 aa15□□□□□ -0.01
LETMD1-223ENST00000550442 CHMP4AQ9BY43 222 aa15□□□□□ -0.01
LETMD1-223ENST00000550442 PRR36Q9H6K5 1346 aa14.99□□□□□ -0.01
LETMD1-223ENST00000550442 HTATSF1O43719 755 aaKnown RBP14.99□□□□□ -0.01
LETMD1-223ENST00000550442 ZNF853P0CG23 659 aa14.99□□□□□ -0.01
LETMD1-223ENST00000550442 DDB1Q16531 1140 aa14.99□□□□□ -0.01
LETMD1-223ENST00000550442 TXNRD1Q16881 649 aa14.99□□□□□ -0.01
LETMD1-223ENST00000550442 NUTM2GQ5VZR2 741 aa14.99□□□□□ -0.01
LETMD1-223ENST00000550442 KLHL34Q8N239 644 aa14.99□□□□□ -0.01
LETMD1-223ENST00000550442 FRAT1Q92837 279 aaPredicted RBP14.99□□□□□ -0.01
LETMD1-223ENST00000550442 SMC4Q9NTJ3 1288 aa14.99□□□□□ -0.01
LETMD1-223ENST00000550442 LMO7Q8WWI1 1683 aa14.98□□□□□ -0.01
LETMD1-223ENST00000550442 EXOSC9Q06265 439 aaKnown RBP14.98□□□□□ -0.01
LETMD1-223ENST00000550442 NME9Q86XW9 330 aa14.98□□□□□ -0.01
LETMD1-223ENST00000550442 LRRC37A3O60309 1634 aa14.98□□□□□ -0.01
LETMD1-223ENST00000550442 PTF1AQ7RTS3 328 aa14.97□□□□□ -0.01
LETMD1-223ENST00000550442 BABAM1Q9NWV8 329 aa14.97□□□□□ -0.01
LETMD1-223ENST00000550442 COG6Q9Y2V7 657 aa14.97□□□□□ -0.01
LETMD1-223ENST00000550442 CRB1P82279 1406 aa14.97□□□□□ -0.01
LETMD1-223ENST00000550442 CPDO75976 1380 aa14.97□□□□□ -0.01
LETMD1-223ENST00000550442 PPM1GO15355 546 aaPredicted RBP14.95□□□□□ -0.02
LETMD1-223ENST00000550442 MSH5O43196 834 aa14.95□□□□□ -0.02
LETMD1-223ENST00000550442 PANK1Q8TE04 598 aa14.95□□□□□ -0.02
LETMD1-223ENST00000550442 API5Q9BZZ5 524 aaKnown RBP14.95□□□□□ -0.02
LETMD1-223ENST00000550442 COL5A2P05997 1499 aaPredicted RBP14.95□□□□□ -0.02
LETMD1-223ENST00000550442 GRIN3BO60391 1043 aa14.94□□□□□ -0.02
LETMD1-223ENST00000550442 SSH1Q8WYL5 1049 aa14.94□□□□□ -0.02
LETMD1-223ENST00000550442 GPBP1L1Q9HC44 474 aaPredicted RBP14.94□□□□□ -0.02
LETMD1-223ENST00000550442 FLT4P35916 1363 aa14.94□□□□□ -0.02
LETMD1-223ENST00000550442 POLD1P28340 1107 aa14.93□□□□□ -0.02
LETMD1-223ENST00000550442 UPF2Q9HAU5 1272 aaKnown RBP14.93□□□□□ -0.02
LETMD1-223ENST00000550442 DAXXQ9UER7 740 aaPredicted RBP14.93□□□□□ -0.02
LETMD1-223ENST00000550442 EMILIN1Q9Y6C2 1016 aa14.93□□□□□ -0.02
LETMD1-223ENST00000550442 USP54Q70EL1 1684 aa14.93□□□□□ -0.02
LETMD1-223ENST00000550442 BCL9O00512 1426 aa14.92□□□□□ -0.02
LETMD1-223ENST00000550442 ATP10DQ9P241 1426 aa14.92□□□□□ -0.02
LETMD1-223ENST00000550442 RTL1A6NKG5 1358 aa14.92□□□□□ -0.02
LETMD1-223ENST00000550442 KDRP35968 1356 aa14.91□□□□□ -0.02
LETMD1-223ENST00000550442 VAMP4O75379 141 aa14.91□□□□□ -0.02
LETMD1-223ENST00000550442 TRIM27P14373 513 aa14.91□□□□□ -0.02
LETMD1-223ENST00000550442 ABTB2Q8N961 1025 aa14.91□□□□□ -0.02
LETMD1-223ENST00000550442 GAS2L2Q8NHY3 880 aa14.91□□□□□ -0.02
LETMD1-223ENST00000550442 GOLGB1Q14789 3259 aaKnown RBP14.9□□□□□ -0.02
LETMD1-223ENST00000550442 WNK3Q9BYP7 1800 aa14.9□□□□□ -0.02
LETMD1-223ENST00000550442 IGHDP01880 384 aa14.9□□□□□ -0.02
LETMD1-223ENST00000550442 TOM1L2Q6ZVM7 507 aa14.9□□□□□ -0.02
LETMD1-223ENST00000550442 MARCH10Q8NA82 808 aaPredicted RBP14.9□□□□□ -0.02
LETMD1-223ENST00000550442 GCC1Q96CN9 775 aa14.9□□□□□ -0.02
LETMD1-223ENST00000550442 CDCA7Q9BWT1 371 aaPredicted RBP14.9□□□□□ -0.02
LETMD1-223ENST00000550442 ZBTB40Q9NUA8 1239 aa14.9□□□□□ -0.02
LETMD1-223ENST00000550442 ZBTB7CA1YPR0 619 aa14.89□□□□□ -0.03
LETMD1-223ENST00000550442 EIF4A2Q14240 407 aaKnown RBP14.89□□□□□ -0.03
LETMD1-223ENST00000550442 C8orf34Q49A92 452 aa14.89□□□□□ -0.03
LETMD1-223ENST00000550442 SMC5Q8IY18 1101 aa14.89□□□□□ -0.03
LETMD1-223ENST00000550442 TSR2Q969E8 191 aaKnown RBP14.89□□□□□ -0.03
LETMD1-223ENST00000550442 NOB1Q9ULX3 412 aaKnown RBP14.89□□□□□ -0.03
LETMD1-223ENST00000550442 USP19O94966 1318 aa14.89□□□□□ -0.03
LETMD1-223ENST00000550442 CHL1O00533 1208 aa14.88□□□□□ -0.03
LETMD1-223ENST00000550442 SLC16A10Q8TF71 515 aa14.88□□□□□ -0.03
LETMD1-223ENST00000550442 PHACTR3Q96KR7 559 aa14.88□□□□□ -0.03
LETMD1-223ENST00000550442 PTPRCP08575 1304 aa14.88□□□□□ -0.03
LETMD1-223ENST00000550442 GCP02774 474 aa14.87□□□□□ -0.03
LETMD1-223ENST00000550442 RLBP1P12271 317 aa14.87□□□□□ -0.03
LETMD1-223ENST00000550442 TWISTNBQ3B726 338 aaPredicted RBP14.87□□□□□ -0.03
LETMD1-223ENST00000550442 MRPL50Q8N5N7 158 aaKnown RBP14.87□□□□□ -0.03
LETMD1-223ENST00000550442 KCNH5Q8NCM2 988 aa14.87□□□□□ -0.03
LETMD1-223ENST00000550442 PCDHB15Q9Y5E8 787 aa14.87□□□□□ -0.03
LETMD1-223ENST00000550442 PAPPAQ13219 1627 aa14.86□□□□□ -0.03
LETMD1-223ENST00000550442 CAPN15O75808 1086 aa14.86□□□□□ -0.03
LETMD1-223ENST00000550442 HMOX1P09601 288 aa14.86□□□□□ -0.03
LETMD1-223ENST00000550442 SULT6B1Q6IMI4 303 aa14.86□□□□□ -0.03
LETMD1-223ENST00000550442 ITPRIPQ8IWB1 547 aa14.86□□□□□ -0.03
LETMD1-223ENST00000550442 NLGN2Q8NFZ4 835 aa14.86□□□□□ -0.03
LETMD1-223ENST00000550442 RTF1Q92541 710 aaKnown RBP14.86□□□□□ -0.03
LETMD1-223ENST00000550442 KAT6BQ8WYB5 2073 aa14.85□□□□□ -0.03
LETMD1-223ENST00000550442 YBX3P16989 372 aaKnown RBP eCLIP14.85□□□□□ -0.03
LETMD1-223ENST00000550442 BECN1Q14457 450 aa14.85□□□□□ -0.03
LETMD1-223ENST00000550442 RRS1Q15050 365 aaKnown RBP14.85□□□□□ -0.03
LETMD1-223ENST00000550442 ZNF526Q8TF50 670 aaPredicted RBP14.85□□□□□ -0.03
LETMD1-223ENST00000550442 MBIPQ9NS73 344 aa14.85□□□□□ -0.03
LETMD1-223ENST00000550442 IGSF1Q8N6C5 1336 aa14.85□□□□□ -0.03
LETMD1-223ENST00000550442 AMPHP49418 695 aa14.84□□□□□ -0.03
LETMD1-223ENST00000550442 APLP1P51693 650 aa14.84□□□□□ -0.03
LETMD1-223ENST00000550442 ABCC4O15439 1325 aa14.84□□□□□ -0.03
LETMD1-223ENST00000550442 PLEKHG2Q9H7P9 1386 aa14.84□□□□□ -0.03
LETMD1-223ENST00000550442 NHSQ6T4R5 1651 aa14.84□□□□□ -0.03
LETMD1-223ENST00000550442 COL24A1Q17RW2 1714 aa14.83□□□□□ -0.03
LETMD1-223ENST00000550442 QSER1Q2KHR3 1735 aa14.83□□□□□ -0.03
LETMD1-223ENST00000550442 EXOC5O00471 708 aa14.83□□□□□ -0.04
LETMD1-223ENST00000550442 RGS3P49796 1198 aa14.83□□□□□ -0.04
LETMD1-223ENST00000550442 ZNF827Q17R98 1081 aa14.83□□□□□ -0.04
LETMD1-223ENST00000550442 ZBTB7BO15156 539 aaPredicted RBP14.82□□□□□ -0.04
LETMD1-223ENST00000550442 INTS3Q68E01 1043 aaKnown RBP14.82□□□□□ -0.04
LETMD1-223ENST00000550442 BCL2L13Q9BXK5 485 aa14.82□□□□□ -0.04
LETMD1-223ENST00000550442 PDZRN3Q9UPQ7 1066 aa14.82□□□□□ -0.04
LETMD1-223ENST00000550442 MAP3K19Q56UN5 1328 aa14.82□□□□□ -0.04
LETMD1-223ENST00000550442 WDR17Q8IZU2 1322 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms