RNA–Protein interactions for RNA: ENST00000550391.5

CACNB3-216, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-216ENST00000550391 PHKG2P15735 406 aa18.42■□□□□ 0.54
CACNB3-216ENST00000550391 MCM10Q7L590 875 aa18.42■□□□□ 0.54
CACNB3-216ENST00000550391 THUMPD2Q9BTF0 503 aaKnown RBP18.42■□□□□ 0.54
CACNB3-216ENST00000550391 PCDH11XQ9BZA7 1347 aa18.42■□□□□ 0.54
CACNB3-216ENST00000550391 PCDH11YQ9BZA8 1340 aa18.42■□□□□ 0.54
CACNB3-216ENST00000550391 NUP188Q5SRE5 1749 aa18.41■□□□□ 0.54
CACNB3-216ENST00000550391 CYP27B1O15528 508 aa18.41■□□□□ 0.54
CACNB3-216ENST00000550391 TRMT2AQ8IZ69 625 aaKnown RBP18.41■□□□□ 0.54
CACNB3-216ENST00000550391 IFNL2Q8IZJ0 200 aa18.41■□□□□ 0.54
CACNB3-216ENST00000550391 IL17REQ8NFR9 667 aa18.41■□□□□ 0.54
CACNB3-216ENST00000550391 CEMIPQ8WUJ3 1361 aa18.4■□□□□ 0.54
CACNB3-216ENST00000550391 SCN11AQ9UI33 1791 aa18.4■□□□□ 0.54
CACNB3-216ENST00000550391 TNS2Q63HR2 1409 aa18.4■□□□□ 0.54
CACNB3-216ENST00000550391 EXOC5O00471 708 aa18.38■□□□□ 0.53
CACNB3-216ENST00000550391 RNMTO43148 476 aaKnown RBP18.38■□□□□ 0.53
CACNB3-216ENST00000550391 DUSP27Q5VZP5 1158 aa18.38■□□□□ 0.53
CACNB3-216ENST00000550391 MPRIPQ6WCQ1 1025 aa18.38■□□□□ 0.53
CACNB3-216ENST00000550391 LGR6Q9HBX8 967 aa18.38■□□□□ 0.53
CACNB3-216ENST00000550391 HSP90AB1P08238 724 aaKnown RBP18.37■□□□□ 0.53
CACNB3-216ENST00000550391 ZNF853P0CG23 659 aa18.37■□□□□ 0.53
CACNB3-216ENST00000550391 NKX1-1Q15270 411 aaPredicted RBP18.37■□□□□ 0.53
CACNB3-216ENST00000550391 MYH16Q9H6N6 1097 aa18.37■□□□□ 0.53
CACNB3-216ENST00000550391 IFT57Q9NWB7 429 aa18.37■□□□□ 0.53
CACNB3-216ENST00000550391 KDM6AO15550 1401 aaPredicted RBP18.37■□□□□ 0.53
CACNB3-216ENST00000550391 DCAF5Q96JK2 942 aa18.36■□□□□ 0.53
CACNB3-216ENST00000550391 CFAP44Q96MT7 982 aa18.36■□□□□ 0.53
CACNB3-216ENST00000550391 SIPA1L3O60292 1781 aaPredicted RBP18.35■□□□□ 0.53
CACNB3-216ENST00000550391 GNAI1P63096 354 aa18.35■□□□□ 0.53
CACNB3-216ENST00000550391 DDB1Q16531 1140 aa18.35■□□□□ 0.53
CACNB3-216ENST00000550391 DDX54Q8TDD1 881 aaKnown RBP18.35■□□□□ 0.53
CACNB3-216ENST00000550391 MRC1P22897 1456 aa18.33■□□□□ 0.53
CACNB3-216ENST00000550391 FANCIQ9NVI1 1328 aa18.33■□□□□ 0.53
CACNB3-216ENST00000550391 CHL1O00533 1208 aa18.33■□□□□ 0.52
CACNB3-216ENST00000550391 TSR2Q969E8 191 aaKnown RBP18.33■□□□□ 0.52
CACNB3-216ENST00000550391 SYT17Q9BSW7 474 aa18.33■□□□□ 0.52
CACNB3-216ENST00000550391 LAS1LQ9Y4W2 734 aaKnown RBP18.33■□□□□ 0.52
CACNB3-216ENST00000550391 TAF7Q15545 349 aaPredicted RBP18.32■□□□□ 0.52
CACNB3-216ENST00000550391 MBIPQ9NS73 344 aa18.32■□□□□ 0.52
CACNB3-216ENST00000550391 TOGARAM1Q9Y4F4 1720 aa18.32■□□□□ 0.52
CACNB3-216ENST00000550391 TEFQ10587 303 aa18.31■□□□□ 0.52
CACNB3-216ENST00000550391 BABAM1Q9NWV8 329 aa18.31■□□□□ 0.52
CACNB3-216ENST00000550391 KDM3BQ7LBC6 1761 aa18.3■□□□□ 0.52
CACNB3-216ENST00000550391 SLC52A2Q9HAB3 445 aa18.3■□□□□ 0.52
CACNB3-216ENST00000550391 ERVV-2B6SEH9 535 aa18.29■□□□□ 0.52
CACNB3-216ENST00000550391 MARCH10Q8NA82 808 aaPredicted RBP18.29■□□□□ 0.52
CACNB3-216ENST00000550391 FHDC1Q9C0D6 1143 aaPredicted RBP18.29■□□□□ 0.52
CACNB3-216ENST00000550391 PTGER2P43116 358 aa18.28■□□□□ 0.52
CACNB3-216ENST00000550391 MIS18AQ9NYP9 233 aa18.28■□□□□ 0.52
CACNB3-216ENST00000550391 TSPYL4Q9UJ04 414 aa18.28■□□□□ 0.52
CACNB3-216ENST00000550391 EXOSC9Q06265 439 aaKnown RBP18.27■□□□□ 0.52
CACNB3-216ENST00000550391 DOT1LQ8TEK3 1739 aa18.26■□□□□ 0.51
CACNB3-216ENST00000550391 BTBD11A6QL63 1104 aa18.26■□□□□ 0.51
CACNB3-216ENST00000550391 CABP4P57796 275 aa18.26■□□□□ 0.51
CACNB3-216ENST00000550391 NFATC2IPQ8NCF5 419 aa18.26■□□□□ 0.51
CACNB3-216ENST00000550391 ITGB4P16144 1822 aa18.26■□□□□ 0.51
CACNB3-216ENST00000550391 CASZ1Q86V15 1759 aa18.25■□□□□ 0.51
CACNB3-216ENST00000550391 PLSCR1O15162 318 aa18.25■□□□□ 0.51
CACNB3-216ENST00000550391 ZBTB7AO95365 584 aa18.24■□□□□ 0.51
CACNB3-216ENST00000550391 CT47B1P0C2W7 299 aaPredicted RBP18.24■□□□□ 0.51
CACNB3-216ENST00000550391 RCAN3Q9UKA8 241 aa18.24■□□□□ 0.51
CACNB3-216ENST00000550391 PAPPAQ13219 1627 aa18.23■□□□□ 0.51
CACNB3-216ENST00000550391 C8orf58Q8NAV2 365 aa18.22■□□□□ 0.51
CACNB3-216ENST00000550391 ATF5Q9Y2D1 282 aaPredicted RBP18.22■□□□□ 0.51
CACNB3-216ENST00000550391 BCL9O00512 1426 aa18.22■□□□□ 0.51
CACNB3-216ENST00000550391 KCNQ3O43525 872 aa18.21■□□□□ 0.51
CACNB3-216ENST00000550391 EIF4A1P60842 406 aaKnown RBP18.21■□□□□ 0.51
CACNB3-216ENST00000550391 TSPYL6Q8N831 410 aa18.21■□□□□ 0.51
CACNB3-216ENST00000550391 TMOD3Q9NYL9 352 aa18.21■□□□□ 0.51
CACNB3-216ENST00000550391 RGPD3A6NKT7 1758 aaPredicted RBP18.21■□□□□ 0.51
CACNB3-216ENST00000550391 RGPD4Q7Z3J3 1758 aa18.21■□□□□ 0.51
CACNB3-216ENST00000550391 VAMP4O75379 141 aa18.2■□□□□ 0.5
CACNB3-216ENST00000550391 GPR162Q16538 588 aa18.2■□□□□ 0.5
CACNB3-216ENST00000550391 KRT24Q2M2I5 525 aa18.2■□□□□ 0.5
CACNB3-216ENST00000550391 ZNF790Q6PG37 636 aa18.2■□□□□ 0.5
CACNB3-216ENST00000550391 UBR2Q8IWV8 1755 aa18.19■□□□□ 0.5
CACNB3-216ENST00000550391 HEG1Q9ULI3 1381 aa18.19■□□□□ 0.5
CACNB3-216ENST00000550391 PRIM1P49642 420 aaKnown RBP18.19■□□□□ 0.5
CACNB3-216ENST00000550391 SLC39A6Q13433 755 aa18.19■□□□□ 0.5
CACNB3-216ENST00000550391 TWISTNBQ3B726 338 aaPredicted RBP18.19■□□□□ 0.5
CACNB3-216ENST00000550391 PIGBQ92521 554 aa18.19■□□□□ 0.5
CACNB3-216ENST00000550391 MTFR1LQ9H019 292 aa18.19■□□□□ 0.5
CACNB3-216ENST00000550391 ANO8Q9HCE9 1232 aaPredicted RBP18.19■□□□□ 0.5
CACNB3-216ENST00000550391 HSPA6P17066 643 aa18.18■□□□□ 0.5
CACNB3-216ENST00000550391 ZNF428Q96B54 188 aa18.18■□□□□ 0.5
CACNB3-216ENST00000550391 PDGFDQ9GZP0 370 aaPredicted RBP18.18■□□□□ 0.5
CACNB3-216ENST00000550391 ELL2O00472 640 aaPredicted RBP18.17■□□□□ 0.5
CACNB3-216ENST00000550391 RARSP54136 660 aaKnown RBP18.17■□□□□ 0.5
CACNB3-216ENST00000550391 ACSBG1Q96GR2 724 aa18.17■□□□□ 0.5
CACNB3-216ENST00000550391 BCL11BQ9C0K0 894 aaPredicted RBP18.17■□□□□ 0.5
CACNB3-216ENST00000550391 SUPT16HQ9Y5B9 1047 aaKnown RBP18.17■□□□□ 0.5
CACNB3-216ENST00000550391 NHSQ6T4R5 1651 aa18.17■□□□□ 0.5
CACNB3-216ENST00000550391 KAT6BQ8WYB5 2073 aa18.17■□□□□ 0.5
CACNB3-216ENST00000550391 SOS1Q07889 1333 aaPredicted RBP18.17■□□□□ 0.5
CACNB3-216ENST00000550391 SBF2Q86WG5 1849 aa18.16■□□□□ 0.5
CACNB3-216ENST00000550391 TTC5Q8N0Z6 440 aa18.16■□□□□ 0.5
CACNB3-216ENST00000550391 SYTL4Q96C24 671 aaPredicted RBP18.16■□□□□ 0.5
CACNB3-216ENST00000550391 KCPQ6ZWJ8 1503 aa18.16■□□□□ 0.5
CACNB3-216ENST00000550391 HOXB7P09629 217 aa18.15■□□□□ 0.5
CACNB3-216ENST00000550391 ARXQ96QS3 562 aa18.15■□□□□ 0.5
CACNB3-216ENST00000550391 RNF123Q5XPI4 1314 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms